RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CAMSAP2Q08AD1 1489 aa31.51■■■□□ 2.63
SND1-214ENST00000489417 CDC42BPBQ9Y5S2 1711 aa31.51■■■□□ 2.63
SND1-214ENST00000489417 ZNF644Q9H582 1327 aaPredicted RBP31.48■■■□□ 2.63
SND1-214ENST00000489417 PLCH2O75038 1416 aa31.47■■■□□ 2.63
SND1-214ENST00000489417 ARHGAP5Q13017 1502 aa31.46■■■□□ 2.63
SND1-214ENST00000489417 ZNF777Q9ULD5 760 aaPredicted RBP31.46■■■□□ 2.63
SND1-214ENST00000489417 ARAP3Q8WWN8 1544 aa31.43■■■□□ 2.62
SND1-214ENST00000489417 DNMT1P26358 1616 aaKnown RBP31.41■■■□□ 2.62
SND1-214ENST00000489417 SAMD9LQ8IVG5 1584 aa31.41■■■□□ 2.62
SND1-214ENST00000489417 PTPRKQ15262 1439 aa31.4■■■□□ 2.62
SND1-214ENST00000489417 DAPK1P53355 1430 aa31.37■■■□□ 2.61
SND1-214ENST00000489417 EFCAB2Q5VUJ9 269 aa31.35■■■□□ 2.61
SND1-214ENST00000489417 ABCC5O15440 1437 aa31.35■■■□□ 2.61
SND1-214ENST00000489417 PLEKHH2Q8IVE3 1493 aa31.33■■■□□ 2.61
SND1-214ENST00000489417 GLI2P10070 1586 aa31.32■■■□□ 2.6
SND1-214ENST00000489417 ARHGEF5Q12774 1597 aa31.3■■■□□ 2.6
SND1-214ENST00000489417 CD109Q6YHK3 1445 aa31.3■■■□□ 2.6
SND1-214ENST00000489417 KIAA1107Q9UPP5 1409 aa31.29■■■□□ 2.6
SND1-214ENST00000489417 CROCC2H7BZ55 1655 aa31.28■■■□□ 2.6
SND1-214ENST00000489417 MBD5Q9P267 1494 aa31.28■■■□□ 2.6
SND1-214ENST00000489417 DIP2BQ9P265 1576 aa31.28■■■□□ 2.6
SND1-214ENST00000489417 FANCAO15360 1455 aa31.27■■■□□ 2.6
SND1-214ENST00000489417 SYCP2Q9BX26 1530 aa31.27■■■□□ 2.6
SND1-214ENST00000489417 ABCC1P33527 1531 aa31.25■■■□□ 2.59
SND1-214ENST00000489417 SETD5Q9C0A6 1442 aa31.25■■■□□ 2.59
SND1-214ENST00000489417 HNRNPMP52272 730 aaKnown RBP eCLIP31.24■■■□□ 2.59
SND1-214ENST00000489417 AKNAQ7Z591 1439 aa31.24■■■□□ 2.59
SND1-214ENST00000489417 CHIC2Q9UKJ5 165 aa31.24■■■□□ 2.59
SND1-214ENST00000489417 MAP3K4Q9Y6R4 1608 aa31.23■■■□□ 2.59
SND1-214ENST00000489417 CCDC141Q6ZP82 1450 aa31.23■■■□□ 2.59
SND1-214ENST00000489417 SHANK2Q9UPX8 1470 aa31.23■■■□□ 2.59
SND1-214ENST00000489417 HFM1A2PYH4 1435 aa31.22■■■□□ 2.59
SND1-214ENST00000489417 RSPH4AQ5TD94 716 aa31.22■■■□□ 2.59
SND1-214ENST00000489417 ROCK1Q13464 1354 aa31.21■■■□□ 2.59
SND1-214ENST00000489417 CFAP74Q9C0B2 1584 aa31.21■■■□□ 2.59
SND1-214ENST00000489417 ARHGEF12Q9NZN5 1544 aa31.19■■■□□ 2.58
SND1-214ENST00000489417 FAM69CQ0P6D2 419 aa31.19■■■□□ 2.58
SND1-214ENST00000489417 ADGBQ8N7X0 1667 aa31.19■■■□□ 2.58
SND1-214ENST00000489417 RAB3GAP2Q9H2M9 1393 aa31.18■■■□□ 2.58
SND1-214ENST00000489417 NAIPQ13075 1403 aa31.17■■■□□ 2.58
SND1-214ENST00000489417 ADGRL2O95490 1459 aa31.17■■■□□ 2.58
SND1-214ENST00000489417 GCC2Q8IWJ2 1684 aa31.16■■■□□ 2.58
SND1-214ENST00000489417 C9orf84Q5VXU9 1444 aa31.16■■■□□ 2.58
SND1-214ENST00000489417 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
SND1-214ENST00000489417 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
SND1-214ENST00000489417 RRP7BPQ9NSQ0 103 aa31.15■■■□□ 2.58
SND1-214ENST00000489417 ADGRL1O94910 1474 aa31.14■■■□□ 2.58
SND1-214ENST00000489417 MAST1Q9Y2H9 1570 aa31.12■■■□□ 2.57
SND1-214ENST00000489417 NEO1Q92859 1461 aa31.11■■■□□ 2.57
SND1-214ENST00000489417 ANKRD30AQ9BXX3 1397 aa31.1■■■□□ 2.57
SND1-214ENST00000489417 NCOA1Q15788 1441 aa31.09■■■□□ 2.57
SND1-214ENST00000489417 TRAPPC8Q9Y2L5 1435 aa31.09■■■□□ 2.57
SND1-214ENST00000489417 HRCP23327 699 aa31.09■■■□□ 2.57
SND1-214ENST00000489417 SCAPERQ9BY12 1400 aa31.09■■■□□ 2.57
SND1-214ENST00000489417 KIF13AQ9H1H9 1805 aa31.07■■■□□ 2.56
SND1-214ENST00000489417 CCER1Q8TC90 406 aaPredicted RBP31.03■■■□□ 2.56
SND1-214ENST00000489417 PPRC1Q5VV67 1664 aaKnown RBP31.01■■■□□ 2.55
SND1-214ENST00000489417 TEX14Q8IWB6 1497 aa30.99■■■□□ 2.55
SND1-214ENST00000489417 KDM6BO15054 1643 aa30.98■■■□□ 2.55
SND1-214ENST00000489417 PLXNC1O60486 1568 aa30.98■■■□□ 2.55
SND1-214ENST00000489417 AFAP1Q8N556 730 aa30.98■■■□□ 2.55
SND1-214ENST00000489417 TSPOAP1O95153 1857 aa30.97■■■□□ 2.55
SND1-214ENST00000489417 KIF15Q9NS87 1388 aa30.96■■■□□ 2.55
SND1-214ENST00000489417 SPAG9O60271 1321 aaKnown RBP30.96■■■□□ 2.55
SND1-214ENST00000489417 ZNF518AQ6AHZ1 1483 aa30.96■■■□□ 2.55
SND1-214ENST00000489417 RTEL1-TNFRSF6BF6WH68 1400 aa30.96■■■□□ 2.55
SND1-214ENST00000489417 POGZQ7Z3K3 1410 aa30.96■■■□□ 2.55
SND1-214ENST00000489417 DHX57Q6P158 1386 aaKnown RBP30.95■■■□□ 2.54
SND1-214ENST00000489417 ZFYVE16Q7Z3T8 1539 aa30.94■■■□□ 2.54
SND1-214ENST00000489417 DENND4BO75064 1496 aaPredicted RBP30.93■■■□□ 2.54
SND1-214ENST00000489417 INO80Q9ULG1 1556 aaPredicted RBP30.93■■■□□ 2.54
SND1-214ENST00000489417 ATP7AQ04656 1500 aa30.9■■■□□ 2.54
SND1-214ENST00000489417 ANKRD50Q9ULJ7 1429 aa30.9■■■□□ 2.54
SND1-214ENST00000489417 KDM5CP41229 1560 aa30.9■■■□□ 2.54
SND1-214ENST00000489417 ACIN1Q9UKV3 1341 aaKnown RBP30.88■■■□□ 2.53
SND1-214ENST00000489417 DUOX2Q9NRD8 1548 aa30.85■■■□□ 2.53
SND1-214ENST00000489417 RICTORQ6R327 1708 aa30.83■■■□□ 2.53
SND1-214ENST00000489417 MLH3Q9UHC1 1453 aa30.81■■■□□ 2.52
SND1-214ENST00000489417 HECW2Q9P2P5 1572 aa30.81■■■□□ 2.52
SND1-214ENST00000489417 KIDINS220Q9ULH0 1771 aa30.8■■■□□ 2.52
SND1-214ENST00000489417 TRIM52Q96A61 297 aa30.8■■■□□ 2.52
SND1-214ENST00000489417 MYT1LQ9UL68 1186 aa30.8■■■□□ 2.52
SND1-214ENST00000489417 RAPGEF3O95398 923 aa30.79■■■□□ 2.52
SND1-214ENST00000489417 FRMPD1Q5SYB0 1578 aa30.78■■■□□ 2.52
SND1-214ENST00000489417 ERBINQ96RT1 1412 aa30.77■■■□□ 2.52
SND1-214ENST00000489417 CLSPNQ9HAW4 1339 aa30.77■■■□□ 2.52
SND1-214ENST00000489417 ZEB1P37275 1124 aaPredicted RBP30.77■■■□□ 2.52
SND1-214ENST00000489417 TRHP20396 242 aaPredicted RBP30.75■■■□□ 2.51
SND1-214ENST00000489417 ZMYM4Q5VZL5 1548 aa30.72■■■□□ 2.51
SND1-214ENST00000489417 DHX29Q7Z478 1369 aaKnown RBP30.68■■■□□ 2.5
SND1-214ENST00000489417 ABCA6Q8N139 1617 aa30.68■■■□□ 2.5
SND1-214ENST00000489417 UNC13BO14795 1591 aa30.67■■■□□ 2.5
SND1-214ENST00000489417 KDM5DQ9BY66 1539 aa30.67■■■□□ 2.5
SND1-214ENST00000489417 PZPP20742 1482 aa30.66■■■□□ 2.5
SND1-214ENST00000489417 MPHOSPH9Q99550 1183 aa30.65■■■□□ 2.5
SND1-214ENST00000489417 A2MP01023 1474 aa30.65■■■□□ 2.5
SND1-214ENST00000489417 COL17A1Q9UMD9 1497 aaPredicted RBP30.64■■■□□ 2.5
SND1-214ENST00000489417 DIP2CQ9Y2E4 1556 aa30.64■■■□□ 2.5
SND1-214ENST00000489417 EIF2AK4Q9P2K8 1649 aaKnown RBP30.64■■■□□ 2.49
SND1-214ENST00000489417 NUP155O75694 1391 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms