RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PDAP1Q13442 181 aaKnown RBP9.2□□□□□ -0.94
PRPF4-203ENST00000488937 KHSRPQ92945 711 aaKnown RBP eCLIP9.19□□□□□ -0.94
PRPF4-203ENST00000488937 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
PRPF4-203ENST00000488937 GSE1Q14687 1217 aa9.15□□□□□ -0.94
PRPF4-203ENST00000488937 MICALL2Q8IY33 904 aa9.15□□□□□ -0.94
PRPF4-203ENST00000488937 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
PRPF4-203ENST00000488937 TK2O00142 265 aa9.14□□□□□ -0.95
PRPF4-203ENST00000488937 HRO43593 1189 aa9.14□□□□□ -0.95
PRPF4-203ENST00000488937 ARHGAP33O14559 1287 aa9.11□□□□□ -0.95
PRPF4-203ENST00000488937 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
PRPF4-203ENST00000488937 NUDT7P0C024 238 aa9.06□□□□□ -0.96
PRPF4-203ENST00000488937 LCE2BO14633 110 aa9.04□□□□□ -0.96
PRPF4-203ENST00000488937 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
PRPF4-203ENST00000488937 PTPN5P54829 565 aa9.03□□□□□ -0.96
PRPF4-203ENST00000488937 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
PRPF4-203ENST00000488937 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
PRPF4-203ENST00000488937 PSDA5PKW4 1024 aaPredicted RBP8.98□□□□□ -0.97
PRPF4-203ENST00000488937 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
PRPF4-203ENST00000488937 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
PRPF4-203ENST00000488937 PSEN2P49810 448 aa8.93□□□□□ -0.98
PRPF4-203ENST00000488937 PCDHGA4Q9Y5G9 962 aa8.92□□□□□ -0.98
PRPF4-203ENST00000488937 SLC34A2O95436 690 aa8.91□□□□□ -0.98
PRPF4-203ENST00000488937 THSD4Q6ZMP0 1018 aa8.9□□□□□ -0.98
PRPF4-203ENST00000488937 ZNF775Q96BV0 537 aaPredicted RBP8.89□□□□□ -0.99
PRPF4-203ENST00000488937 SOX12O15370 315 aa8.87□□□□□ -0.99
PRPF4-203ENST00000488937 ZNF787Q6DD87 383 aa8.87□□□□□ -0.99
PRPF4-203ENST00000488937 MS4A4AQ96JQ5 239 aa8.87□□□□□ -0.99
PRPF4-203ENST00000488937 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
PRPF4-203ENST00000488937 GFRA3O60609 400 aa8.85□□□□□ -0.99
PRPF4-203ENST00000488937 KRTAP4-6Q9BYQ5 205 aa8.85□□□□□ -0.99
PRPF4-203ENST00000488937 ITGBL1O95965 494 aaPredicted RBP8.84□□□□□ -0.99
PRPF4-203ENST00000488937 KIF3CO14782 793 aa8.83□□□□□ -1
PRPF4-203ENST00000488937 VPS9D1Q9Y2B5 631 aa8.82□□□□□ -1
PRPF4-203ENST00000488937 KLHL34Q8N239 644 aa8.8□□□□□ -1
PRPF4-203ENST00000488937 KDM4FA0A1W2PPD8 638 aa8.78□□□□□ -1
PRPF4-203ENST00000488937 KCNH8Q96L42 1107 aa8.78□□□□□ -1
PRPF4-203ENST00000488937 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
PRPF4-203ENST00000488937 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
PRPF4-203ENST00000488937 NRG2O14511 850 aaPredicted RBP8.76□□□□□ -1.01
PRPF4-203ENST00000488937 WNT2BQ93097 391 aa8.76□□□□□ -1.01
PRPF4-203ENST00000488937 PHF8Q9UPP1 1060 aa8.75□□□□□ -1.01
PRPF4-203ENST00000488937 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
PRPF4-203ENST00000488937 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
PRPF4-203ENST00000488937 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
PRPF4-203ENST00000488937 KCNK17Q96T54 332 aa8.73□□□□□ -1.01
PRPF4-203ENST00000488937 FBXO3Q9UK99 471 aa8.73□□□□□ -1.01
PRPF4-203ENST00000488937 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
PRPF4-203ENST00000488937 FKBP8Q14318 412 aa8.65□□□□□ -1.02
PRPF4-203ENST00000488937 CIZ1Q9ULV3 898 aaPredicted RBP8.65□□□□□ -1.02
PRPF4-203ENST00000488937 KCNC4Q03721 635 aa8.64□□□□□ -1.03
PRPF4-203ENST00000488937 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
PRPF4-203ENST00000488937 NLRP6P59044 892 aa8.62□□□□□ -1.03
PRPF4-203ENST00000488937 NYAP1Q6ZVC0 841 aa8.61□□□□□ -1.03
PRPF4-203ENST00000488937 FBXO22Q8NEZ5 403 aa8.59□□□□□ -1.03
PRPF4-203ENST00000488937 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
PRPF4-203ENST00000488937 VASPP50552 380 aaPredicted RBP8.58□□□□□ -1.04
PRPF4-203ENST00000488937 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
PRPF4-203ENST00000488937 NBPF3Q9H094 633 aa8.58□□□□□ -1.04
PRPF4-203ENST00000488937 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
PRPF4-203ENST00000488937 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
PRPF4-203ENST00000488937 BCL2L12Q9HB09 334 aa8.56□□□□□ -1.04
PRPF4-203ENST00000488937 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
PRPF4-203ENST00000488937 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
PRPF4-203ENST00000488937 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
PRPF4-203ENST00000488937 ANKK1Q8NFD2 765 aa8.53□□□□□ -1.04
PRPF4-203ENST00000488937 V9GY48 417 aaPredicted RBP8.53□□□□□ -1.04
PRPF4-203ENST00000488937 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
PRPF4-203ENST00000488937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.51□□□□□ -1.05
PRPF4-203ENST00000488937 ZFP91Q96JP5 570 aaPredicted RBP8.51□□□□□ -1.05
PRPF4-203ENST00000488937 TBC1D12O60347 775 aa8.5□□□□□ -1.05
PRPF4-203ENST00000488937 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
PRPF4-203ENST00000488937 PTPREP23469 700 aa8.49□□□□□ -1.05
PRPF4-203ENST00000488937 SOWAHBA6NEL2 793 aa8.47□□□□□ -1.05
PRPF4-203ENST00000488937 BCAMP50895 628 aa8.46□□□□□ -1.06
PRPF4-203ENST00000488937 RIOK3O14730 519 aaKnown RBP8.45□□□□□ -1.06
PRPF4-203ENST00000488937 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
PRPF4-203ENST00000488937 ZNF454Q8N9F8 522 aa8.45□□□□□ -1.06
PRPF4-203ENST00000488937 WBP1LQ9NX94 342 aa8.43□□□□□ -1.06
PRPF4-203ENST00000488937 POTECB2RU33 542 aa8.42□□□□□ -1.06
PRPF4-203ENST00000488937 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
PRPF4-203ENST00000488937 RABGEF1Q9UJ41 708 aa8.4□□□□□ -1.06
PRPF4-203ENST00000488937 FOXK1P85037 733 aa8.39□□□□□ -1.07
PRPF4-203ENST00000488937 INSM1Q01101 510 aaPredicted RBP8.38□□□□□ -1.07
PRPF4-203ENST00000488937 LAPTM4BQ86VI4 370 aa8.38□□□□□ -1.07
PRPF4-203ENST00000488937 FOSBP53539 338 aa8.37□□□□□ -1.07
PRPF4-203ENST00000488937 PLPP6Q8IY26 295 aa8.37□□□□□ -1.07
PRPF4-203ENST00000488937 RNF25Q96BH1 459 aaPredicted RBP8.37□□□□□ -1.07
PRPF4-203ENST00000488937 MYT1Q01538 1121 aa8.36□□□□□ -1.07
PRPF4-203ENST00000488937 WIPF1O43516 503 aa8.35□□□□□ -1.07
PRPF4-203ENST00000488937 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
PRPF4-203ENST00000488937 ZFRQ96KR1 1074 aaKnown RBP8.34□□□□□ -1.07
PRPF4-203ENST00000488937 SUZ12Q15022 739 aaKnown RBP8.33□□□□□ -1.08
PRPF4-203ENST00000488937 WFS1O76024 890 aa8.32□□□□□ -1.08
PRPF4-203ENST00000488937 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
PRPF4-203ENST00000488937 IFNLR1Q8IU57 520 aaPredicted RBP8.32□□□□□ -1.08
PRPF4-203ENST00000488937 DGAT1O75907 488 aa8.31□□□□□ -1.08
PRPF4-203ENST00000488937 TSR3Q9UJK0 312 aaKnown RBP8.31□□□□□ -1.08
PRPF4-203ENST00000488937 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
PRPF4-203ENST00000488937 TJAP1Q5JTD0 557 aa8.28□□□□□ -1.08
PRPF4-203ENST00000488937 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms