RNA–Protein interactions for RNA: ENST00000488449.1

TMCO4-204, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 3

Gene TMCO4, Length 647 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-204ENST00000488449 POGZQ7Z3K3 1410 aa26.54■■□□□ 1.84
TMCO4-204ENST00000488449 MAGI2Q86UL8 1455 aa26.53■■□□□ 1.84
TMCO4-204ENST00000488449 CDC42BPAQ5VT25 1732 aa26.53■■□□□ 1.84
TMCO4-204ENST00000488449 ARHGAP5Q13017 1502 aa26.5■■□□□ 1.83
TMCO4-204ENST00000488449 EFCAB2Q5VUJ9 269 aa26.5■■□□□ 1.83
TMCO4-204ENST00000488449 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
TMCO4-204ENST00000488449 KDM5CP41229 1560 aa26.48■■□□□ 1.83
TMCO4-204ENST00000488449 ZFYVE16Q7Z3T8 1539 aa26.45■■□□□ 1.83
TMCO4-204ENST00000488449 ABCC1P33527 1531 aa26.44■■□□□ 1.82
TMCO4-204ENST00000488449 ADAMTSL3P82987 1691 aa26.44■■□□□ 1.82
TMCO4-204ENST00000488449 ZNF518AQ6AHZ1 1483 aa26.44■■□□□ 1.82
TMCO4-204ENST00000488449 EHBP1L1Q8N3D4 1523 aa26.44■■□□□ 1.82
TMCO4-204ENST00000488449 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
TMCO4-204ENST00000488449 ITSN2Q9NZM3 1697 aa26.41■■□□□ 1.82
TMCO4-204ENST00000488449 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.82
TMCO4-204ENST00000488449 GPATCH8Q9UKJ3 1502 aaKnown RBP26.39■■□□□ 1.81
TMCO4-204ENST00000488449 YEATS2Q9ULM3 1422 aa26.38■■□□□ 1.81
TMCO4-204ENST00000488449 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
TMCO4-204ENST00000488449 HECW2Q9P2P5 1572 aa26.37■■□□□ 1.81
TMCO4-204ENST00000488449 MTUS2Q5JR59 1369 aa26.36■■□□□ 1.81
TMCO4-204ENST00000488449 SIGLEC1Q9BZZ2 1709 aa26.36■■□□□ 1.81
TMCO4-204ENST00000488449 TIAM1Q13009 1591 aa26.35■■□□□ 1.81
TMCO4-204ENST00000488449 SAMD9LQ8IVG5 1584 aa26.34■■□□□ 1.81
TMCO4-204ENST00000488449 ARHGEF12Q9NZN5 1544 aa26.34■■□□□ 1.81
TMCO4-204ENST00000488449 MLH3Q9UHC1 1453 aa26.33■■□□□ 1.81
TMCO4-204ENST00000488449 REREQ9P2R6 1566 aa26.33■■□□□ 1.8
TMCO4-204ENST00000488449 MAP3K1Q13233 1512 aa26.32■■□□□ 1.8
TMCO4-204ENST00000488449 ATP10AO60312 1499 aa26.3■■□□□ 1.8
TMCO4-204ENST00000488449 PLEKHH2Q8IVE3 1493 aa26.29■■□□□ 1.8
TMCO4-204ENST00000488449 DIP2CQ9Y2E4 1556 aa26.29■■□□□ 1.8
TMCO4-204ENST00000488449 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
TMCO4-204ENST00000488449 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
TMCO4-204ENST00000488449 KIAA1107Q9UPP5 1409 aa26.28■■□□□ 1.8
TMCO4-204ENST00000488449 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
TMCO4-204ENST00000488449 TRAPPC8Q9Y2L5 1435 aa26.27■■□□□ 1.8
TMCO4-204ENST00000488449 ABCA6Q8N139 1617 aa26.26■■□□□ 1.79
TMCO4-204ENST00000488449 CCNB3Q8WWL7 1395 aa26.26■■□□□ 1.79
TMCO4-204ENST00000488449 SYCP2Q9BX26 1530 aa26.25■■□□□ 1.79
TMCO4-204ENST00000488449 KIDINS220Q9ULH0 1771 aa26.25■■□□□ 1.79
TMCO4-204ENST00000488449 PTPRMP28827 1452 aa26.24■■□□□ 1.79
TMCO4-204ENST00000488449 AFAP1Q8N556 730 aa26.23■■□□□ 1.79
TMCO4-204ENST00000488449 NCOA2Q15596 1464 aa26.21■■□□□ 1.79
TMCO4-204ENST00000488449 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.78
TMCO4-204ENST00000488449 INO80Q9ULG1 1556 aaPredicted RBP26.19■■□□□ 1.78
TMCO4-204ENST00000488449 AGLP35573 1532 aa26.19■■□□□ 1.78
TMCO4-204ENST00000488449 CFDP1Q9UEE9 299 aaPredicted RBP26.18■■□□□ 1.78
TMCO4-204ENST00000488449 RIMS1Q86UR5 1692 aaKnown RBP26.18■■□□□ 1.78
TMCO4-204ENST00000488449 FER1L4A9Z1Z3 1794 aa26.18■■□□□ 1.78
TMCO4-204ENST00000488449 ARID4BQ4LE39 1312 aaPredicted RBP26.17■■□□□ 1.78
TMCO4-204ENST00000488449 MBD5Q9P267 1494 aa26.13■■□□□ 1.77
TMCO4-204ENST00000488449 ATP7AQ04656 1500 aa26.13■■□□□ 1.77
TMCO4-204ENST00000488449 PLXNC1O60486 1568 aa26.09■■□□□ 1.77
TMCO4-204ENST00000488449 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
TMCO4-204ENST00000488449 CAMSAP2Q08AD1 1489 aa26.06■■□□□ 1.76
TMCO4-204ENST00000488449 ARHGEF5Q12774 1597 aa26.06■■□□□ 1.76
TMCO4-204ENST00000488449 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
TMCO4-204ENST00000488449 SPAG9O60271 1321 aaKnown RBP26.05■■□□□ 1.76
TMCO4-204ENST00000488449 ADGBQ8N7X0 1667 aa26.05■■□□□ 1.76
TMCO4-204ENST00000488449 RTEL1-TNFRSF6BF6WH68 1400 aa26.04■■□□□ 1.76
TMCO4-204ENST00000488449 ZNF644Q9H582 1327 aaPredicted RBP26.02■■□□□ 1.76
TMCO4-204ENST00000488449 CCDC141Q6ZP82 1450 aa26.01■■□□□ 1.75
TMCO4-204ENST00000488449 MIA2Q96PC5 1412 aa25.99■■□□□ 1.75
TMCO4-204ENST00000488449 MYOM3Q5VTT5 1437 aa25.98■■□□□ 1.75
TMCO4-204ENST00000488449 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
TMCO4-204ENST00000488449 MYT1LQ9UL68 1186 aa25.97■■□□□ 1.75
TMCO4-204ENST00000488449 A2MP01023 1474 aa25.97■■□□□ 1.75
TMCO4-204ENST00000488449 LMTK3Q96Q04 1460 aa25.97■■□□□ 1.75
TMCO4-204ENST00000488449 RSPH4AQ5TD94 716 aa25.96■■□□□ 1.75
TMCO4-204ENST00000488449 MROH2AA6NES4 1674 aa25.95■■□□□ 1.74
TMCO4-204ENST00000488449 MAST1Q9Y2H9 1570 aa25.94■■□□□ 1.74
TMCO4-204ENST00000488449 MLECQ14165 292 aa25.93■■□□□ 1.74
TMCO4-204ENST00000488449 CNTLNQ9NXG0 1405 aa25.93■■□□□ 1.74
TMCO4-204ENST00000488449 SETD1BQ9UPS6 1966 aaKnown RBP25.93■■□□□ 1.74
TMCO4-204ENST00000488449 C3P01024 1663 aa25.91■■□□□ 1.74
TMCO4-204ENST00000488449 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
TMCO4-204ENST00000488449 FAM135AQ9P2D6 1515 aa25.86■■□□□ 1.73
TMCO4-204ENST00000488449 APLP2Q06481 763 aa25.85■■□□□ 1.73
TMCO4-204ENST00000488449 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
TMCO4-204ENST00000488449 CROCC2H7BZ55 1655 aa25.83■■□□□ 1.73
TMCO4-204ENST00000488449 PTPN23Q9H3S7 1636 aa25.82■■□□□ 1.72
TMCO4-204ENST00000488449 TCOF1Q13428 1488 aaKnown RBP25.82■■□□□ 1.72
TMCO4-204ENST00000488449 SHANK2Q9UPX8 1470 aa25.8■■□□□ 1.72
TMCO4-204ENST00000488449 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
TMCO4-204ENST00000488449 FGD6Q6ZV73 1430 aa25.8■■□□□ 1.72
TMCO4-204ENST00000488449 CLTCQ00610 1675 aaKnown RBP25.79■■□□□ 1.72
TMCO4-204ENST00000488449 NPATQ14207 1427 aa25.78■■□□□ 1.72
TMCO4-204ENST00000488449 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
TMCO4-204ENST00000488449 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
TMCO4-204ENST00000488449 RNF17Q9BXT8 1623 aaKnown RBP25.76■■□□□ 1.71
TMCO4-204ENST00000488449 TSPY4P0CV99 314 aa25.74■■□□□ 1.71
TMCO4-204ENST00000488449 TSPY10P0CW01 314 aa25.74■■□□□ 1.71
TMCO4-204ENST00000488449 CEBPAP49715 358 aaPredicted RBP25.73■■□□□ 1.71
TMCO4-204ENST00000488449 ESF1Q9H501 851 aaKnown RBP25.73■■□□□ 1.71
TMCO4-204ENST00000488449 UHRF1BP1Q6BDS2 1440 aa25.71■■□□□ 1.71
TMCO4-204ENST00000488449 ZMYM3Q14202 1370 aa25.7■■□□□ 1.71
TMCO4-204ENST00000488449 KDM5DQ9BY66 1539 aa25.7■■□□□ 1.7
TMCO4-204ENST00000488449 ABCC5O15440 1437 aa25.7■■□□□ 1.7
TMCO4-204ENST00000488449 DAPK1P53355 1430 aa25.68■■□□□ 1.7
TMCO4-204ENST00000488449 DUOX2Q9NRD8 1548 aa25.68■■□□□ 1.7
TMCO4-204ENST00000488449 ZNF142P52746 1687 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms