RNA–Protein interactions for RNA: ENST00000488354.1

PSMD1-211, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 3

Gene PSMD1, Length 659 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-211ENST00000488354 ARSIQ5FYB1 569 aa12.34□□□□□ -0.43
PSMD1-211ENST00000488354 GPR153Q6NV75 609 aa12.33□□□□□ -0.44
PSMD1-211ENST00000488354 RNF166Q96A37 237 aaPredicted RBP12.33□□□□□ -0.44
PSMD1-211ENST00000488354 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
PSMD1-211ENST00000488354 NLRP6P59044 892 aa12.31□□□□□ -0.44
PSMD1-211ENST00000488354 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
PSMD1-211ENST00000488354 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
PSMD1-211ENST00000488354 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
PSMD1-211ENST00000488354 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
PSMD1-211ENST00000488354 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
PSMD1-211ENST00000488354 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.45
PSMD1-211ENST00000488354 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
PSMD1-211ENST00000488354 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
PSMD1-211ENST00000488354 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
PSMD1-211ENST00000488354 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
PSMD1-211ENST00000488354 STK25O00506 426 aa12.22□□□□□ -0.45
PSMD1-211ENST00000488354 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
PSMD1-211ENST00000488354 MFRPQ9BY79 579 aa12.19□□□□□ -0.46
PSMD1-211ENST00000488354 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
PSMD1-211ENST00000488354 C2orf72A6NCS6 295 aa12.17□□□□□ -0.46
PSMD1-211ENST00000488354 NUDT7P0C024 238 aa12.16□□□□□ -0.46
PSMD1-211ENST00000488354 PKD2Q13563 968 aa12.12□□□□□ -0.47
PSMD1-211ENST00000488354 PTGER2P43116 358 aa12.11□□□□□ -0.47
PSMD1-211ENST00000488354 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
PSMD1-211ENST00000488354 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
PSMD1-211ENST00000488354 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
PSMD1-211ENST00000488354 KIF3CO14782 793 aa12.09□□□□□ -0.47
PSMD1-211ENST00000488354 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
PSMD1-211ENST00000488354 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.48
PSMD1-211ENST00000488354 RGL2O15211 777 aa12.06□□□□□ -0.48
PSMD1-211ENST00000488354 PPP1R37O75864 691 aa12.01□□□□□ -0.49
PSMD1-211ENST00000488354 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
PSMD1-211ENST00000488354 PBX2P40425 430 aa12□□□□□ -0.49
PSMD1-211ENST00000488354 SLC34A2O95436 690 aa11.98□□□□□ -0.49
PSMD1-211ENST00000488354 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
PSMD1-211ENST00000488354 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
PSMD1-211ENST00000488354 ADGRD1Q6QNK2 874 aa11.91□□□□□ -0.5
PSMD1-211ENST00000488354 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
PSMD1-211ENST00000488354 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
PSMD1-211ENST00000488354 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
PSMD1-211ENST00000488354 PSEN2P49810 448 aa11.88□□□□□ -0.51
PSMD1-211ENST00000488354 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
PSMD1-211ENST00000488354 DMRTA1Q5VZB9 504 aa11.86□□□□□ -0.51
PSMD1-211ENST00000488354 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
PSMD1-211ENST00000488354 STAC3Q96MF2 364 aa11.85□□□□□ -0.51
PSMD1-211ENST00000488354 TBC1D12O60347 775 aa11.82□□□□□ -0.52
PSMD1-211ENST00000488354 FOXK1P85037 733 aa11.82□□□□□ -0.52
PSMD1-211ENST00000488354 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
PSMD1-211ENST00000488354 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
PSMD1-211ENST00000488354 DSG2Q14126 1118 aa11.81□□□□□ -0.52
PSMD1-211ENST00000488354 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
PSMD1-211ENST00000488354 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
PSMD1-211ENST00000488354 TK2O00142 265 aa11.78□□□□□ -0.52
PSMD1-211ENST00000488354 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
PSMD1-211ENST00000488354 KCNK17Q96T54 332 aa11.77□□□□□ -0.53
PSMD1-211ENST00000488354 HRO43593 1189 aa11.76□□□□□ -0.53
PSMD1-211ENST00000488354 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
PSMD1-211ENST00000488354 KCNH8Q96L42 1107 aa11.75□□□□□ -0.53
PSMD1-211ENST00000488354 HS6ST3Q8IZP7 471 aa11.74□□□□□ -0.53
PSMD1-211ENST00000488354 PTPN5P54829 565 aa11.72□□□□□ -0.53
PSMD1-211ENST00000488354 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
PSMD1-211ENST00000488354 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
PSMD1-211ENST00000488354 OXER1Q8TDS5 423 aa11.65□□□□□ -0.54
PSMD1-211ENST00000488354 GOLGA8CPA6NN73 597 aa11.62□□□□□ -0.55
PSMD1-211ENST00000488354 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
PSMD1-211ENST00000488354 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
PSMD1-211ENST00000488354 PTPREP23469 700 aa11.58□□□□□ -0.56
PSMD1-211ENST00000488354 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
PSMD1-211ENST00000488354 CRISPLD2Q9H0B8 497 aa11.57□□□□□ -0.56
PSMD1-211ENST00000488354 PDE4AP27815 886 aa11.56□□□□□ -0.56
PSMD1-211ENST00000488354 FOSBP53539 338 aa11.56□□□□□ -0.56
PSMD1-211ENST00000488354 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
PSMD1-211ENST00000488354 EVI5O60447 810 aa11.54□□□□□ -0.56
PSMD1-211ENST00000488354 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
PSMD1-211ENST00000488354 BBXQ8WY36 941 aaPredicted RBP11.54□□□□□ -0.56
PSMD1-211ENST00000488354 WNT2BQ93097 391 aa11.54□□□□□ -0.56
PSMD1-211ENST00000488354 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
PSMD1-211ENST00000488354 THSD4Q6ZMP0 1018 aa11.52□□□□□ -0.57
PSMD1-211ENST00000488354 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
PSMD1-211ENST00000488354 NCKAP5LQ9HCH0 1330 aa11.52□□□□□ -0.57
PSMD1-211ENST00000488354 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
PSMD1-211ENST00000488354 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
PSMD1-211ENST00000488354 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
PSMD1-211ENST00000488354 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
PSMD1-211ENST00000488354 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
PSMD1-211ENST00000488354 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
PSMD1-211ENST00000488354 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.5□□□□□ -0.57
PSMD1-211ENST00000488354 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
PSMD1-211ENST00000488354 ANO8Q9HCE9 1232 aaPredicted RBP11.49□□□□□ -0.57
PSMD1-211ENST00000488354 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
PSMD1-211ENST00000488354 NBPF3Q9H094 633 aa11.45□□□□□ -0.58
PSMD1-211ENST00000488354 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
PSMD1-211ENST00000488354 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
PSMD1-211ENST00000488354 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
PSMD1-211ENST00000488354 IRX2Q9BZI1 471 aaPredicted RBP11.42□□□□□ -0.58
PSMD1-211ENST00000488354 A0A0G2JS52 829 aa11.4□□□□□ -0.58
PSMD1-211ENST00000488354 PROX2Q3B8N5 592 aa11.4□□□□□ -0.58
PSMD1-211ENST00000488354 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
PSMD1-211ENST00000488354 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
PSMD1-211ENST00000488354 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms