RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
R3HDM1-219ENST00000488035 MS4A4AQ96JQ5 239 aa9.04□□□□□ -0.96
R3HDM1-219ENST00000488035 ARSIQ5FYB1 569 aa9.03□□□□□ -0.96
R3HDM1-219ENST00000488035 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
R3HDM1-219ENST00000488035 PBX2P40425 430 aa9.01□□□□□ -0.97
R3HDM1-219ENST00000488035 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■■■□ 21.5
R3HDM1-219ENST00000488035 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
R3HDM1-219ENST00000488035 POTEEQ6S8J3 1075 aa8.95□□□□□ -0.98
R3HDM1-219ENST00000488035 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
R3HDM1-219ENST00000488035 PHF8Q9UPP1 1060 aa8.94□□□□□ -0.98
R3HDM1-219ENST00000488035 KIF3CO14782 793 aa8.93□□□□□ -0.98
R3HDM1-219ENST00000488035 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
R3HDM1-219ENST00000488035 SLC34A2O95436 690 aa8.92□□□□□ -0.98
R3HDM1-219ENST00000488035 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
R3HDM1-219ENST00000488035 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.98
R3HDM1-219ENST00000488035 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.89□□□□□ -0.99
R3HDM1-219ENST00000488035 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
R3HDM1-219ENST00000488035 ZFP91Q96JP5 570 aaPredicted RBP8.89□□□□□ -0.99
R3HDM1-219ENST00000488035 NLRP6P59044 892 aa8.87□□□□□ -0.99
R3HDM1-219ENST00000488035 AXIN2Q9Y2T1 843 aa8.87□□□□□ -0.99
R3HDM1-219ENST00000488035 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
R3HDM1-219ENST00000488035 NUDT7P0C024 238 aa8.85□□□□□ -0.99
R3HDM1-219ENST00000488035 TAOK2Q9UL54 1235 aa8.85□□□□□ -0.99
R3HDM1-219ENST00000488035 TK2O00142 265 aa8.84□□□□□ -0.99
R3HDM1-219ENST00000488035 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
R3HDM1-219ENST00000488035 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
R3HDM1-219ENST00000488035 C2orf72A6NCS6 295 aa8.83□□□□□ -1
R3HDM1-219ENST00000488035 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
R3HDM1-219ENST00000488035 ARHGAP33O14559 1287 aa8.82□□□□□ -1
R3HDM1-219ENST00000488035 HRO43593 1189 aa8.82□□□□□ -1
R3HDM1-219ENST00000488035 PSDA5PKW4 1024 aaPredicted RBP8.81□□□□□ -1
R3HDM1-219ENST00000488035 RGS20O76081 388 aa8.79□□□□□ -1
R3HDM1-219ENST00000488035 IFFO2Q5TF58 517 aa8.78□□□□□ -1
R3HDM1-219ENST00000488035 MFRPQ9BY79 579 aa8.77□□□□□ -1.01
R3HDM1-219ENST00000488035 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
R3HDM1-219ENST00000488035 PTCD2Q8WV60 388 aaKnown RBP8.72□□□□□ -1.01
R3HDM1-219ENST00000488035 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
R3HDM1-219ENST00000488035 STK24Q9Y6E0 443 aa8.71□□□□□ -1.02
R3HDM1-219ENST00000488035 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
R3HDM1-219ENST00000488035 STK25O00506 426 aa8.67□□□□□ -1.02
R3HDM1-219ENST00000488035 PSEN2P49810 448 aa8.67□□□□□ -1.02
R3HDM1-219ENST00000488035 KCTD12Q96CX2 325 aaKnown RBP8.66□□□□□ -1.02
R3HDM1-219ENST00000488035 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
R3HDM1-219ENST00000488035 SLC4A5Q9BY07 1137 aa8.64□□□□□ -1.03
R3HDM1-219ENST00000488035 IRX2Q9BZI1 471 aaPredicted RBP8.63□□□□□ -1.03
R3HDM1-219ENST00000488035 A0A0G2JS52 829 aa8.62□□□□□ -1.03
R3HDM1-219ENST00000488035 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
R3HDM1-219ENST00000488035 VPS9D1Q9Y2B5 631 aa8.61□□□□□ -1.03
R3HDM1-219ENST00000488035 FOXK1P85037 733 aa8.6□□□□□ -1.03
R3HDM1-219ENST00000488035 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
R3HDM1-219ENST00000488035 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
R3HDM1-219ENST00000488035 THSD4Q6ZMP0 1018 aa8.56□□□□□ -1.04
R3HDM1-219ENST00000488035 PPP1R37O75864 691 aa8.55□□□□□ -1.04
R3HDM1-219ENST00000488035 KCNH8Q96L42 1107 aa8.55□□□□□ -1.04
R3HDM1-219ENST00000488035 GPHNQ9NQX3 736 aaPredicted RBP8.55□□□□□ -1.04
R3HDM1-219ENST00000488035 TBC1D12O60347 775 aa8.54□□□□□ -1.04
R3HDM1-219ENST00000488035 PLPP6Q8IY26 295 aa8.54□□□□□ -1.04
R3HDM1-219ENST00000488035 KCNK17Q96T54 332 aa8.54□□□□□ -1.04
R3HDM1-219ENST00000488035 PTPN5P54829 565 aa8.53□□□□□ -1.04
R3HDM1-219ENST00000488035 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
R3HDM1-219ENST00000488035 RGL2O15211 777 aa8.5□□□□□ -1.05
R3HDM1-219ENST00000488035 DSG2Q14126 1118 aa8.49□□□□□ -1.05
R3HDM1-219ENST00000488035 OXER1Q8TDS5 423 aa8.49□□□□□ -1.05
R3HDM1-219ENST00000488035 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-219ENST00000488035 ZBED2Q9BTP6 218 aa8.48□□□□□ -1.05
R3HDM1-219ENST00000488035 PKD2Q13563 968 aa8.47□□□□□ -1.05
R3HDM1-219ENST00000488035 FOSBP53539 338 aa8.46□□□□□ -1.06
R3HDM1-219ENST00000488035 WNT2BQ93097 391 aa8.45□□□□□ -1.06
R3HDM1-219ENST00000488035 PTPREP23469 700 aa8.43□□□□□ -1.06
R3HDM1-219ENST00000488035 MRPL50Q8N5N7 158 aaKnown RBP8.43□□□□□ -1.06
R3HDM1-219ENST00000488035 ZNF454Q8N9F8 522 aa8.43□□□□□ -1.06
R3HDM1-219ENST00000488035 ANO8Q9HCE9 1232 aaPredicted RBP8.43□□□□□ -1.06
R3HDM1-219ENST00000488035 LCE2BO14633 110 aa8.41□□□□□ -1.06
R3HDM1-219ENST00000488035 GOLGA8CPA6NN73 597 aa8.4□□□□□ -1.06
R3HDM1-219ENST00000488035 NBPF3Q9H094 633 aa8.4□□□□□ -1.06
R3HDM1-219ENST00000488035 JPH4Q96JJ6 628 aa8.39□□□□□ -1.07
R3HDM1-219ENST00000488035 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
R3HDM1-219ENST00000488035 Q6ZNB5 142 aa8.37□□□□□ -1.07
R3HDM1-219ENST00000488035 NYAP1Q6ZVC0 841 aa8.37□□□□□ -1.07
R3HDM1-219ENST00000488035 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
R3HDM1-219ENST00000488035 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
R3HDM1-219ENST00000488035 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-219ENST00000488035 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
R3HDM1-219ENST00000488035 ADAM33Q9BZ11 813 aa8.34□□□□□ -1.07
R3HDM1-219ENST00000488035 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
R3HDM1-219ENST00000488035 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
R3HDM1-219ENST00000488035 ANKK1Q8NFD2 765 aa8.32□□□□□ -1.08
R3HDM1-219ENST00000488035 UPF1Q92900 1129 aaKnown RBP eCLIP8.32□□□□□ -1.08
R3HDM1-219ENST00000488035 PPP1R3GB7ZBB8 358 aa8.31□□□□□ -1.08
R3HDM1-219ENST00000488035 SOWAHBA6NEL2 793 aa8.3□□□□□ -1.08
R3HDM1-219ENST00000488035 CHGAP10645 457 aaKnown RBP8.29□□□□□ -1.08
R3HDM1-219ENST00000488035 PPP1R15BQ5SWA1 713 aa8.29□□□□□ -1.08
R3HDM1-219ENST00000488035 DNAJC5Q9H3Z4 198 aa8.29□□□□□ -1.08
R3HDM1-219ENST00000488035 KCNC4Q03721 635 aa8.28□□□□□ -1.08
R3HDM1-219ENST00000488035 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-219ENST00000488035 EVI5O60447 810 aa8.27□□□□□ -1.09
R3HDM1-219ENST00000488035 PDE4AP27815 886 aa8.26□□□□□ -1.09
R3HDM1-219ENST00000488035 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
R3HDM1-219ENST00000488035 BCAMP50895 628 aa8.25□□□□□ -1.09
R3HDM1-219ENST00000488035 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms