RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
PTEN-204ENST00000487939 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
PTEN-204ENST00000487939 SNPHO15079 494 aa11.38□□□□□ -0.59
PTEN-204ENST00000487939 PPP1R37O75864 691 aa11.38□□□□□ -0.59
PTEN-204ENST00000487939 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
PTEN-204ENST00000487939 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
PTEN-204ENST00000487939 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
PTEN-204ENST00000487939 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
PTEN-204ENST00000487939 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
PTEN-204ENST00000487939 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
PTEN-204ENST00000487939 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
PTEN-204ENST00000487939 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
PTEN-204ENST00000487939 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
PTEN-204ENST00000487939 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
PTEN-204ENST00000487939 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
PTEN-204ENST00000487939 CADPS2Q86UW7 1296 aa11.22□□□□□ -0.61
PTEN-204ENST00000487939 PDE4AP27815 886 aa11.2□□□□□ -0.62
PTEN-204ENST00000487939 EMP3P54852 163 aa11.19□□□□□ -0.62
PTEN-204ENST00000487939 TMC2Q8TDI7 906 aa11.19□□□□□ -0.62
PTEN-204ENST00000487939 CRISPLD2Q9H0B8 497 aa11.17□□□□□ -0.62
PTEN-204ENST00000487939 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
PTEN-204ENST00000487939 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
PTEN-204ENST00000487939 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
PTEN-204ENST00000487939 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
PTEN-204ENST00000487939 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.62
PTEN-204ENST00000487939 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
PTEN-204ENST00000487939 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
PTEN-204ENST00000487939 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
PTEN-204ENST00000487939 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
PTEN-204ENST00000487939 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
PTEN-204ENST00000487939 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
PTEN-204ENST00000487939 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
PTEN-204ENST00000487939 MFSD10Q14728 455 aa11.11□□□□□ -0.63
PTEN-204ENST00000487939 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
PTEN-204ENST00000487939 KIF3CO14782 793 aa11.1□□□□□ -0.63
PTEN-204ENST00000487939 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
PTEN-204ENST00000487939 FOXK1P85037 733 aa11.08□□□□□ -0.64
PTEN-204ENST00000487939 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
PTEN-204ENST00000487939 DSG2Q14126 1118 aa11.06□□□□□ -0.64
PTEN-204ENST00000487939 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
PTEN-204ENST00000487939 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
PTEN-204ENST00000487939 E2F4Q16254 413 aa11.02□□□□□ -0.65
PTEN-204ENST00000487939 HOXB3P14651 431 aaPredicted RBP11.01□□□□□ -0.65
PTEN-204ENST00000487939 CAMK2BQ13554 666 aa10.98□□□□□ -0.65
PTEN-204ENST00000487939 HOXB1P14653 301 aaPredicted RBP10.97□□□□□ -0.65
PTEN-204ENST00000487939 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
PTEN-204ENST00000487939 SLC34A2O95436 690 aa10.94□□□□□ -0.66
PTEN-204ENST00000487939 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
PTEN-204ENST00000487939 KCNV2Q8TDN2 545 aa10.93□□□□□ -0.66
PTEN-204ENST00000487939 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
PTEN-204ENST00000487939 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
PTEN-204ENST00000487939 TBC1D12O60347 775 aa10.91□□□□□ -0.66
PTEN-204ENST00000487939 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
PTEN-204ENST00000487939 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
PTEN-204ENST00000487939 ERBB3P21860 1342 aa10.89□□□□□ -0.67
PTEN-204ENST00000487939 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
PTEN-204ENST00000487939 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
PTEN-204ENST00000487939 UPF1Q92900 1129 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTEN-204ENST00000487939 ZSWIM6Q9HCJ5 1215 aa10.88□□□□□ -0.67
PTEN-204ENST00000487939 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
PTEN-204ENST00000487939 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
PTEN-204ENST00000487939 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
PTEN-204ENST00000487939 DPYSL4O14531 572 aa10.85□□□□□ -0.67
PTEN-204ENST00000487939 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
PTEN-204ENST00000487939 NBR1Q14596 966 aa10.84□□□□□ -0.67
PTEN-204ENST00000487939 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
PTEN-204ENST00000487939 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
PTEN-204ENST00000487939 PDIA6Q15084 440 aa10.8□□□□□ -0.68
PTEN-204ENST00000487939 BCANQ96GW7 911 aa10.8□□□□□ -0.68
PTEN-204ENST00000487939 MYT1LQ9UL68 1186 aa10.8□□□□□ -0.68
PTEN-204ENST00000487939 EVI5O60447 810 aa10.78□□□□□ -0.68
PTEN-204ENST00000487939 ARSIQ5FYB1 569 aa10.78□□□□□ -0.68
PTEN-204ENST00000487939 GPR153Q6NV75 609 aa10.78□□□□□ -0.68
PTEN-204ENST00000487939 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
PTEN-204ENST00000487939 NUDT7P0C024 238 aa10.74□□□□□ -0.69
PTEN-204ENST00000487939 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
PTEN-204ENST00000487939 TULP1O00294 542 aaPredicted RBP10.72□□□□□ -0.69
PTEN-204ENST00000487939 PTGER2P43116 358 aa10.72□□□□□ -0.69
PTEN-204ENST00000487939 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.691e-10■□□□□ 8.4
PTEN-204ENST00000487939 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
PTEN-204ENST00000487939 SEMA3EO15041 775 aa10.7□□□□□ -0.7
PTEN-204ENST00000487939 SMYD5Q6GMV2 418 aa10.7□□□□□ -0.7
PTEN-204ENST00000487939 TESPA1A2RU30 521 aaPredicted RBP10.69□□□□□ -0.7
PTEN-204ENST00000487939 PSDA5PKW4 1024 aaPredicted RBP10.69□□□□□ -0.7
PTEN-204ENST00000487939 JPH4Q96JJ6 628 aa10.66□□□□□ -0.7
PTEN-204ENST00000487939 PHF14O94880 888 aa10.65□□□□□ -0.7
PTEN-204ENST00000487939 DDX12PQ92771 950 aa10.65□□□□□ -0.7
PTEN-204ENST00000487939 LHX6Q9UPM6 363 aa10.65□□□□□ -0.7
PTEN-204ENST00000487939 GRXCR2A6NFK2 248 aa10.64□□□□□ -0.71
PTEN-204ENST00000487939 MLLT3P42568 568 aaPredicted RBP10.64□□□□□ -0.71
PTEN-204ENST00000487939 EPAS1Q99814 870 aa10.64□□□□□ -0.71
PTEN-204ENST00000487939 FOSBP53539 338 aa10.63□□□□□ -0.71
PTEN-204ENST00000487939 PPP4R3BQ5MIZ7 849 aa10.62□□□□□ -0.71
PTEN-204ENST00000487939 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
PTEN-204ENST00000487939 ZNF454Q8N9F8 522 aa10.62□□□□□ -0.71
PTEN-204ENST00000487939 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
PTEN-204ENST00000487939 PCDHGA10Q9Y5H3 936 aa10.6□□□□□ -0.71
PTEN-204ENST00000487939 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
PTEN-204ENST00000487939 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
PTEN-204ENST00000487939 OSBPP22059 807 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms