RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 ADGRL1O94910 1474 aa14.77□□□□□ -0.04
LCN2-205ENST00000487719 COL17A1Q9UMD9 1497 aaPredicted RBP14.77□□□□□ -0.04
LCN2-205ENST00000487719 APLP2Q06481 763 aa14.77□□□□□ -0.05
LCN2-205ENST00000487719 TIAM1Q13009 1591 aa14.77□□□□□ -0.05
LCN2-205ENST00000487719 DENND4BO75064 1496 aaPredicted RBP14.76□□□□□ -0.05
LCN2-205ENST00000487719 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
LCN2-205ENST00000487719 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
LCN2-205ENST00000487719 FRMPD1Q5SYB0 1578 aa14.72□□□□□ -0.05
LCN2-205ENST00000487719 MAP3K1Q13233 1512 aa14.71□□□□□ -0.05
LCN2-205ENST00000487719 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
LCN2-205ENST00000487719 RAPGEF3O95398 923 aa14.7□□□□□ -0.06
LCN2-205ENST00000487719 ZMYM4Q5VZL5 1548 aa14.7□□□□□ -0.06
LCN2-205ENST00000487719 ARHGEF40Q8TER5 1519 aa14.7□□□□□ -0.06
LCN2-205ENST00000487719 ZNF518AQ6AHZ1 1483 aa14.69□□□□□ -0.06
LCN2-205ENST00000487719 POGZQ7Z3K3 1410 aa14.69□□□□□ -0.06
LCN2-205ENST00000487719 ABCC1P33527 1531 aa14.68□□□□□ -0.06
LCN2-205ENST00000487719 MAGI2Q86UL8 1455 aa14.68□□□□□ -0.06
LCN2-205ENST00000487719 PLEKHH2Q8IVE3 1493 aa14.68□□□□□ -0.06
LCN2-205ENST00000487719 ZFYVE16Q7Z3T8 1539 aa14.67□□□□□ -0.06
LCN2-205ENST00000487719 LRRC9Q6ZRR7 1453 aa14.66□□□□□ -0.06
LCN2-205ENST00000487719 CFDP1Q9UEE9 299 aaPredicted RBP14.66□□□□□ -0.06
LCN2-205ENST00000487719 MYT1LQ9UL68 1186 aa14.66□□□□□ -0.06
LCN2-205ENST00000487719 GPATCH8Q9UKJ3 1502 aaKnown RBP14.66□□□□□ -0.06
LCN2-205ENST00000487719 HECW2Q9P2P5 1572 aa14.65□□□□□ -0.06
LCN2-205ENST00000487719 NCOA2Q15596 1464 aa14.65□□□□□ -0.06
LCN2-205ENST00000487719 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
LCN2-205ENST00000487719 SAMD9LQ8IVG5 1584 aa14.64□□□□□ -0.07
LCN2-205ENST00000487719 KDM5CP41229 1560 aa14.64□□□□□ -0.07
LCN2-205ENST00000487719 SYCP2Q9BX26 1530 aa14.62□□□□□ -0.07
LCN2-205ENST00000487719 ARID4BQ4LE39 1312 aaPredicted RBP14.62□□□□□ -0.07
LCN2-205ENST00000487719 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
LCN2-205ENST00000487719 BCORL1Q5H9F3 1711 aa14.59□□□□□ -0.07
LCN2-205ENST00000487719 C9orf84Q5VXU9 1444 aa14.58□□□□□ -0.08
LCN2-205ENST00000487719 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
LCN2-205ENST00000487719 ATP10AO60312 1499 aa14.57□□□□□ -0.08
LCN2-205ENST00000487719 MLH3Q9UHC1 1453 aa14.57□□□□□ -0.08
LCN2-205ENST00000487719 AFAP1Q8N556 730 aa14.56□□□□□ -0.08
LCN2-205ENST00000487719 YEATS2Q9ULM3 1422 aa14.56□□□□□ -0.08
LCN2-205ENST00000487719 CAMSAP2Q08AD1 1489 aa14.56□□□□□ -0.08
LCN2-205ENST00000487719 ARHGEF12Q9NZN5 1544 aa14.56□□□□□ -0.08
LCN2-205ENST00000487719 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
LCN2-205ENST00000487719 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
LCN2-205ENST00000487719 FER1L4A9Z1Z3 1794 aa14.55□□□□□ -0.08
LCN2-205ENST00000487719 TRAPPC8Q9Y2L5 1435 aa14.55□□□□□ -0.08
LCN2-205ENST00000487719 DIP2CQ9Y2E4 1556 aa14.55□□□□□ -0.08
LCN2-205ENST00000487719 SPAG9O60271 1321 aaKnown RBP14.54□□□□□ -0.08
LCN2-205ENST00000487719 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
LCN2-205ENST00000487719 ATP7AQ04656 1500 aa14.54□□□□□ -0.08
LCN2-205ENST00000487719 ADAMTSL3P82987 1691 aa14.54□□□□□ -0.08
LCN2-205ENST00000487719 REREQ9P2R6 1566 aa14.53□□□□□ -0.08
LCN2-205ENST00000487719 INO80Q9ULG1 1556 aaPredicted RBP14.53□□□□□ -0.08
LCN2-205ENST00000487719 MIA2Q96PC5 1412 aa14.53□□□□□ -0.08
LCN2-205ENST00000487719 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
LCN2-205ENST00000487719 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
LCN2-205ENST00000487719 KANK4Q5T7N3 995 aaPredicted RBP14.53□□□□□ -0.08
LCN2-205ENST00000487719 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
LCN2-205ENST00000487719 CCDC141Q6ZP82 1450 aa14.52□□□□□ -0.08
LCN2-205ENST00000487719 ARHGEF5Q12774 1597 aa14.51□□□□□ -0.09
LCN2-205ENST00000487719 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
LCN2-205ENST00000487719 MADDQ8WXG6 1647 aa14.51□□□□□ -0.09
LCN2-205ENST00000487719 PTPN23Q9H3S7 1636 aa14.5□□□□□ -0.09
LCN2-205ENST00000487719 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
LCN2-205ENST00000487719 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
LCN2-205ENST00000487719 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
LCN2-205ENST00000487719 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
LCN2-205ENST00000487719 MBD5Q9P267 1494 aa14.47□□□□□ -0.09
LCN2-205ENST00000487719 RTEL1-TNFRSF6BF6WH68 1400 aa14.47□□□□□ -0.09
LCN2-205ENST00000487719 AGLP35573 1532 aa14.46□□□□□ -0.09
LCN2-205ENST00000487719 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.09
LCN2-205ENST00000487719 ESF1Q9H501 851 aaKnown RBP14.46□□□□□ -0.09
LCN2-205ENST00000487719 MLECQ14165 292 aa14.45□□□□□ -0.1
LCN2-205ENST00000487719 FGD6Q6ZV73 1430 aa14.44□□□□□ -0.1
LCN2-205ENST00000487719 A2MP01023 1474 aa14.44□□□□□ -0.1
LCN2-205ENST00000487719 MAST1Q9Y2H9 1570 aa14.43□□□□□ -0.1
LCN2-205ENST00000487719 PTPRMP28827 1452 aa14.43□□□□□ -0.1
LCN2-205ENST00000487719 SETD1BQ9UPS6 1966 aaKnown RBP14.42□□□□□ -0.1
LCN2-205ENST00000487719 DNMT1P26358 1616 aaKnown RBP14.42□□□□□ -0.1
LCN2-205ENST00000487719 PLXNC1O60486 1568 aa14.42□□□□□ -0.1
LCN2-205ENST00000487719 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
LCN2-205ENST00000487719 TCOF1Q13428 1488 aaKnown RBP14.39□□□□□ -0.11
LCN2-205ENST00000487719 SHANK2Q9UPX8 1470 aa14.39□□□□□ -0.11
LCN2-205ENST00000487719 CNTLNQ9NXG0 1405 aa14.39□□□□□ -0.11
LCN2-205ENST00000487719 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
LCN2-205ENST00000487719 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
LCN2-205ENST00000487719 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
LCN2-205ENST00000487719 DHX29Q7Z478 1369 aaKnown RBP14.36□□□□□ -0.11
LCN2-205ENST00000487719 DAPK1P53355 1430 aa14.36□□□□□ -0.11
LCN2-205ENST00000487719 C3P01024 1663 aa14.36□□□□□ -0.11
LCN2-205ENST00000487719 PLPPR3Q6T4P5 718 aa14.35□□□□□ -0.11
LCN2-205ENST00000487719 PREX1Q8TCU6 1659 aa14.35□□□□□ -0.11
LCN2-205ENST00000487719 DUOX2Q9NRD8 1548 aa14.35□□□□□ -0.11
LCN2-205ENST00000487719 FAM135AQ9P2D6 1515 aa14.34□□□□□ -0.11
LCN2-205ENST00000487719 GGT6Q6P531 493 aa14.33□□□□□ -0.12
LCN2-205ENST00000487719 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
LCN2-205ENST00000487719 ANKRD30AQ9BXX3 1397 aa14.33□□□□□ -0.12
LCN2-205ENST00000487719 ABCC5O15440 1437 aa14.32□□□□□ -0.12
LCN2-205ENST00000487719 KIF3BO15066 747 aa14.32□□□□□ -0.12
LCN2-205ENST00000487719 ZC3H13Q5T200 1668 aaKnown RBP14.32□□□□□ -0.12
LCN2-205ENST00000487719 RNF17Q9BXT8 1623 aaKnown RBP14.31□□□□□ -0.12
LCN2-205ENST00000487719 KIF15Q9NS87 1388 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms