RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 PBX2P40425 430 aa11.76□□□□□ -0.53
USP9X-208ENST00000487625 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
USP9X-208ENST00000487625 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
USP9X-208ENST00000487625 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
USP9X-208ENST00000487625 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
USP9X-208ENST00000487625 NUDT7P0C024 238 aa11.66□□□□□ -0.54
USP9X-208ENST00000487625 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
USP9X-208ENST00000487625 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
USP9X-208ENST00000487625 LHX6Q9UPM6 363 aa11.63□□□□□ -0.55
USP9X-208ENST00000487625 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
USP9X-208ENST00000487625 SOX12O15370 315 aa11.58□□□□□ -0.56
USP9X-208ENST00000487625 PHF8Q9UPP1 1060 aa11.58□□□□□ -0.56
USP9X-208ENST00000487625 HRO43593 1189 aa11.57□□□□□ -0.56
USP9X-208ENST00000487625 RGS20O76081 388 aa11.57□□□□□ -0.56
USP9X-208ENST00000487625 ARHGAP33O14559 1287 aa11.54□□□□□ -0.56
USP9X-208ENST00000487625 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
USP9X-208ENST00000487625 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
USP9X-208ENST00000487625 TK2O00142 265 aa11.51□□□□□ -0.57
USP9X-208ENST00000487625 KIF3CO14782 793 aa11.51□□□□□ -0.57
USP9X-208ENST00000487625 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
USP9X-208ENST00000487625 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
USP9X-208ENST00000487625 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
USP9X-208ENST00000487625 C2orf72A6NCS6 295 aa11.46□□□□□ -0.57
USP9X-208ENST00000487625 SLC34A2O95436 690 aa11.46□□□□□ -0.57
USP9X-208ENST00000487625 PSEN2P49810 448 aa11.45□□□□□ -0.58
USP9X-208ENST00000487625 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
USP9X-208ENST00000487625 A0A0G2JS52 829 aa11.44□□□□□ -0.58
USP9X-208ENST00000487625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
USP9X-208ENST00000487625 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
USP9X-208ENST00000487625 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
USP9X-208ENST00000487625 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
USP9X-208ENST00000487625 PTPN5P54829 565 aa11.39□□□□□ -0.59
USP9X-208ENST00000487625 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
USP9X-208ENST00000487625 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
USP9X-208ENST00000487625 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
USP9X-208ENST00000487625 NLRP6P59044 892 aa11.35□□□□□ -0.59
USP9X-208ENST00000487625 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
USP9X-208ENST00000487625 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
USP9X-208ENST00000487625 Q6ZNB5 142 aa11.32□□□□□ -0.6
USP9X-208ENST00000487625 VGFO15240 615 aaPredicted RBP11.29□□□□□ -0.6
USP9X-208ENST00000487625 THSD4Q6ZMP0 1018 aa11.26□□□□□ -0.61
USP9X-208ENST00000487625 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
USP9X-208ENST00000487625 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
USP9X-208ENST00000487625 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
USP9X-208ENST00000487625 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
USP9X-208ENST00000487625 LCE2BO14633 110 aa11.23□□□□□ -0.61
USP9X-208ENST00000487625 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
USP9X-208ENST00000487625 PTCD2Q8WV60 388 aaKnown RBP11.21□□□□□ -0.61
USP9X-208ENST00000487625 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
USP9X-208ENST00000487625 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
USP9X-208ENST00000487625 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
USP9X-208ENST00000487625 WNT2BQ93097 391 aa11.13□□□□□ -0.63
USP9X-208ENST00000487625 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
USP9X-208ENST00000487625 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
USP9X-208ENST00000487625 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
USP9X-208ENST00000487625 GOLGA8CPA6NN73 597 aa11.07□□□□□ -0.64
USP9X-208ENST00000487625 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
USP9X-208ENST00000487625 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
USP9X-208ENST00000487625 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
USP9X-208ENST00000487625 LAPTM4AQ15012 233 aa11.03□□□□□ -0.64
USP9X-208ENST00000487625 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
USP9X-208ENST00000487625 PLPP6Q8IY26 295 aa11.02□□□□□ -0.65
USP9X-208ENST00000487625 FOXK1P85037 733 aa11.01□□□□□ -0.65
USP9X-208ENST00000487625 PPP1R37O75864 691 aa11□□□□□ -0.65
USP9X-208ENST00000487625 TBC1D12O60347 775 aa10.99□□□□□ -0.65
USP9X-208ENST00000487625 ZNF454Q8N9F8 522 aa10.99□□□□□ -0.65
USP9X-208ENST00000487625 GFRA3O60609 400 aa10.97□□□□□ -0.65
USP9X-208ENST00000487625 STK25O00506 426 aa10.96□□□□□ -0.65
USP9X-208ENST00000487625 PTPREP23469 700 aa10.95□□□□□ -0.66
USP9X-208ENST00000487625 DSG2Q14126 1118 aa10.94□□□□□ -0.66
USP9X-208ENST00000487625 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
USP9X-208ENST00000487625 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
USP9X-208ENST00000487625 FOSBP53539 338 aa10.91□□□□□ -0.66
USP9X-208ENST00000487625 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
USP9X-208ENST00000487625 BCAMP50895 628 aa10.89□□□□□ -0.67
USP9X-208ENST00000487625 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
USP9X-208ENST00000487625 KCNC4Q03721 635 aa10.88□□□□□ -0.67
USP9X-208ENST00000487625 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
USP9X-208ENST00000487625 ZNF775Q96BV0 537 aaPredicted RBP10.87□□□□□ -0.67
USP9X-208ENST00000487625 ZNF787Q6DD87 383 aa10.86□□□□□ -0.67
USP9X-208ENST00000487625 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
USP9X-208ENST00000487625 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP9X-208ENST00000487625 ADAM33Q9BZ11 813 aa10.83□□□□□ -0.68
USP9X-208ENST00000487625 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
USP9X-208ENST00000487625 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
USP9X-208ENST00000487625 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
USP9X-208ENST00000487625 JPH4Q96JJ6 628 aa10.8□□□□□ -0.68
USP9X-208ENST00000487625 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
USP9X-208ENST00000487625 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
USP9X-208ENST00000487625 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
USP9X-208ENST00000487625 PRKD2Q9BZL6 878 aa10.76□□□□□ -0.69
USP9X-208ENST00000487625 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
USP9X-208ENST00000487625 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
USP9X-208ENST00000487625 LAPTM4BQ86VI4 370 aa10.73□□□□□ -0.69
USP9X-208ENST00000487625 ZFRQ96KR1 1074 aaKnown RBP10.73□□□□□ -0.69
USP9X-208ENST00000487625 COL9A1P20849 921 aa10.7□□□□□ -0.7
USP9X-208ENST00000487625 EVI5O60447 810 aa10.66□□□□□ -0.7
USP9X-208ENST00000487625 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
USP9X-208ENST00000487625 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
USP9X-208ENST00000487625 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms