RNA–Protein interactions for RNA: ENST00000487543.2

SPATA6-208, Transcript of spermatogenesis associated 6, humanhuman

TSL 5

Gene SPATA6, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA6-208ENST00000487543 TTC37Q6PGP7 1564 aa15.8■□□□□ 0.12
SPATA6-208ENST00000487543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.8■□□□□ 0.12
SPATA6-208ENST00000487543 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
SPATA6-208ENST00000487543 FANCAO15360 1455 aa15.78■□□□□ 0.12
SPATA6-208ENST00000487543 AKNAQ7Z591 1439 aa15.77■□□□□ 0.12
SPATA6-208ENST00000487543 CDC42BPAQ5VT25 1732 aa15.77■□□□□ 0.12
SPATA6-208ENST00000487543 ARID4BQ4LE39 1312 aaPredicted RBP15.77■□□□□ 0.12
SPATA6-208ENST00000487543 PREX2Q70Z35 1606 aa15.77■□□□□ 0.12
SPATA6-208ENST00000487543 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.11
SPATA6-208ENST00000487543 DENND4BO75064 1496 aaPredicted RBP15.76■□□□□ 0.11
SPATA6-208ENST00000487543 FRMPD1Q5SYB0 1578 aa15.75■□□□□ 0.11
SPATA6-208ENST00000487543 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
SPATA6-208ENST00000487543 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
SPATA6-208ENST00000487543 HECW2Q9P2P5 1572 aa15.72■□□□□ 0.11
SPATA6-208ENST00000487543 FGD6Q6ZV73 1430 aa15.72■□□□□ 0.11
SPATA6-208ENST00000487543 PLCH2O75038 1416 aa15.71■□□□□ 0.11
SPATA6-208ENST00000487543 MIA2Q96PC5 1412 aa15.71■□□□□ 0.11
SPATA6-208ENST00000487543 CFDP1Q9UEE9 299 aaPredicted RBP15.71■□□□□ 0.11
SPATA6-208ENST00000487543 PTPN23Q9H3S7 1636 aa15.71■□□□□ 0.11
SPATA6-208ENST00000487543 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.1
SPATA6-208ENST00000487543 CFAP74Q9C0B2 1584 aa15.7■□□□□ 0.1
SPATA6-208ENST00000487543 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
SPATA6-208ENST00000487543 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
SPATA6-208ENST00000487543 SCAPERQ9BY12 1400 aa15.68■□□□□ 0.1
SPATA6-208ENST00000487543 PTPRMP28827 1452 aa15.68■□□□□ 0.1
SPATA6-208ENST00000487543 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
SPATA6-208ENST00000487543 RICTORQ6R327 1708 aa15.66■□□□□ 0.1
SPATA6-208ENST00000487543 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
SPATA6-208ENST00000487543 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
SPATA6-208ENST00000487543 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
SPATA6-208ENST00000487543 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
SPATA6-208ENST00000487543 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
SPATA6-208ENST00000487543 ARHGEF40Q8TER5 1519 aa15.64■□□□□ 0.09
SPATA6-208ENST00000487543 MLECQ14165 292 aa15.64■□□□□ 0.09
SPATA6-208ENST00000487543 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
SPATA6-208ENST00000487543 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
SPATA6-208ENST00000487543 SAMD9LQ8IVG5 1584 aa15.64■□□□□ 0.09
SPATA6-208ENST00000487543 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
SPATA6-208ENST00000487543 PLEKHH2Q8IVE3 1493 aa15.64■□□□□ 0.09
SPATA6-208ENST00000487543 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
SPATA6-208ENST00000487543 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
SPATA6-208ENST00000487543 AFAP1Q8N556 730 aa15.62■□□□□ 0.09
SPATA6-208ENST00000487543 ZMYM4Q5VZL5 1548 aa15.62■□□□□ 0.09
SPATA6-208ENST00000487543 ZFYVE16Q7Z3T8 1539 aa15.62■□□□□ 0.09
SPATA6-208ENST00000487543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
SPATA6-208ENST00000487543 MADDQ8WXG6 1647 aa15.61■□□□□ 0.09
SPATA6-208ENST00000487543 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
SPATA6-208ENST00000487543 ABCC1P33527 1531 aa15.61■□□□□ 0.09
SPATA6-208ENST00000487543 SYCP2Q9BX26 1530 aa15.6■□□□□ 0.09
SPATA6-208ENST00000487543 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
SPATA6-208ENST00000487543 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.09
SPATA6-208ENST00000487543 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
SPATA6-208ENST00000487543 KIAA1107Q9UPP5 1409 aa15.57■□□□□ 0.08
SPATA6-208ENST00000487543 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
SPATA6-208ENST00000487543 ITGAEP38570 1179 aa15.56■□□□□ 0.08
SPATA6-208ENST00000487543 ATP10AO60312 1499 aa15.56■□□□□ 0.08
SPATA6-208ENST00000487543 CCDC141Q6ZP82 1450 aa15.56■□□□□ 0.08
SPATA6-208ENST00000487543 CROCC2H7BZ55 1655 aa15.56■□□□□ 0.08
SPATA6-208ENST00000487543 SIGLEC1Q9BZZ2 1709 aa15.56■□□□□ 0.08
SPATA6-208ENST00000487543 DAPK1P53355 1430 aa15.55■□□□□ 0.08
SPATA6-208ENST00000487543 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
SPATA6-208ENST00000487543 ZNF518AQ6AHZ1 1483 aa15.54■□□□□ 0.08
SPATA6-208ENST00000487543 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
SPATA6-208ENST00000487543 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
SPATA6-208ENST00000487543 HNRNPMP52272 730 aaKnown RBP eCLIP15.52■□□□□ 0.08
SPATA6-208ENST00000487543 HSPA2P54652 639 aa15.52■□□□□ 0.08
SPATA6-208ENST00000487543 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.07
SPATA6-208ENST00000487543 MBD5Q9P267 1494 aa15.52■□□□□ 0.07
SPATA6-208ENST00000487543 SHANK2Q9UPX8 1470 aa15.52■□□□□ 0.07
SPATA6-208ENST00000487543 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
SPATA6-208ENST00000487543 ADGBQ8N7X0 1667 aa15.51■□□□□ 0.07
SPATA6-208ENST00000487543 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
SPATA6-208ENST00000487543 ARHGEF12Q9NZN5 1544 aa15.51■□□□□ 0.07
SPATA6-208ENST00000487543 ABCC5O15440 1437 aa15.51■□□□□ 0.07
SPATA6-208ENST00000487543 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
SPATA6-208ENST00000487543 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
SPATA6-208ENST00000487543 CEBPAP49715 358 aaPredicted RBP15.5■□□□□ 0.07
SPATA6-208ENST00000487543 KDM5CP41229 1560 aa15.49■□□□□ 0.07
SPATA6-208ENST00000487543 MAST1Q9Y2H9 1570 aa15.48■□□□□ 0.07
SPATA6-208ENST00000487543 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
SPATA6-208ENST00000487543 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
SPATA6-208ENST00000487543 DIP2CQ9Y2E4 1556 aa15.45■□□□□ 0.06
SPATA6-208ENST00000487543 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
SPATA6-208ENST00000487543 ATP7AQ04656 1500 aa15.44■□□□□ 0.06
SPATA6-208ENST00000487543 CHIC2Q9UKJ5 165 aa15.44■□□□□ 0.06
SPATA6-208ENST00000487543 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
SPATA6-208ENST00000487543 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
SPATA6-208ENST00000487543 ROCK1Q13464 1354 aa15.43■□□□□ 0.06
SPATA6-208ENST00000487543 ADGRL2O95490 1459 aa15.43■□□□□ 0.06
SPATA6-208ENST00000487543 PLXNC1O60486 1568 aa15.43■□□□□ 0.06
SPATA6-208ENST00000487543 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
SPATA6-208ENST00000487543 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
SPATA6-208ENST00000487543 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
SPATA6-208ENST00000487543 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
SPATA6-208ENST00000487543 ABCA6Q8N139 1617 aa15.41■□□□□ 0.06
SPATA6-208ENST00000487543 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
SPATA6-208ENST00000487543 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
SPATA6-208ENST00000487543 KIF15Q9NS87 1388 aa15.38■□□□□ 0.05
SPATA6-208ENST00000487543 REREQ9P2R6 1566 aa15.38■□□□□ 0.05
SPATA6-208ENST00000487543 NCOA1Q15788 1441 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms