RNA–Protein interactions for RNA: ENST00000487515.1

CHM-204, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 5

Gene CHM, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-204ENST00000487515 GSE1Q14687 1217 aa8.88□□□□□ -0.99
CHM-204ENST00000487515 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
CHM-204ENST00000487515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.87□□□□□ -0.992e-6■□□□□ 9.2
CHM-204ENST00000487515 DNAJC5Q9H3Z4 198 aa8.85□□□□□ -0.99
CHM-204ENST00000487515 PSEN1P49768 467 aa8.82□□□□□ -1
CHM-204ENST00000487515 HOXB3P14651 431 aaPredicted RBP8.81□□□□□ -1
CHM-204ENST00000487515 HOMEZQ8IX15 550 aa8.81□□□□□ -1
CHM-204ENST00000487515 CIZ1Q9ULV3 898 aaPredicted RBP8.81□□□□□ -1
CHM-204ENST00000487515 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
CHM-204ENST00000487515 HOXB1P14653 301 aaPredicted RBP8.79□□□□□ -1
CHM-204ENST00000487515 PDAP1Q13442 181 aaKnown RBP8.77□□□□□ -1.01
CHM-204ENST00000487515 TRIM41Q8WV44 630 aa8.77□□□□□ -1.01
CHM-204ENST00000487515 C14orf37Q86TY3 774 aa8.76□□□□□ -1.01
CHM-204ENST00000487515 HS6ST3Q8IZP7 471 aa8.76□□□□□ -1.01
CHM-204ENST00000487515 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
CHM-204ENST00000487515 DPY19L2Q6NUT2 758 aa8.75□□□□□ -1.01
CHM-204ENST00000487515 DOK7Q18PE1 504 aa8.74□□□□□ -1.01
CHM-204ENST00000487515 G3V3G9 751 aa8.73□□□□□ -1.01
CHM-204ENST00000487515 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
CHM-204ENST00000487515 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
CHM-204ENST00000487515 ERBB3P21860 1342 aa8.71□□□□□ -1.02
CHM-204ENST00000487515 CABP2Q9NPB3 220 aa8.69□□□□□ -1.02
CHM-204ENST00000487515 RIMBP2O15034 1052 aa8.68□□□□□ -1.02
CHM-204ENST00000487515 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
CHM-204ENST00000487515 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
CHM-204ENST00000487515 PTGER2P43116 358 aa8.65□□□□□ -1.02
CHM-204ENST00000487515 VARS2Q5ST30 1063 aaKnown RBP8.64□□□□□ -1.03
CHM-204ENST00000487515 ZNF687Q8N1G0 1237 aa8.64□□□□□ -1.03
CHM-204ENST00000487515 P3H3Q8IVL6 736 aa8.61□□□□□ -1.03
CHM-204ENST00000487515 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
CHM-204ENST00000487515 GTPBP6O43824 516 aaPredicted RBP8.58□□□□□ -1.04
CHM-204ENST00000487515 RYDENQ9NUL5 291 aaKnown RBP8.58□□□□□ -1.04
CHM-204ENST00000487515 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
CHM-204ENST00000487515 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
CHM-204ENST00000487515 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
CHM-204ENST00000487515 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
CHM-204ENST00000487515 STK25O00506 426 aa8.55□□□□□ -1.04
CHM-204ENST00000487515 EFCAB3Q8N7B9 438 aa8.55□□□□□ -1.04
CHM-204ENST00000487515 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
CHM-204ENST00000487515 SOX12O15370 315 aa8.51□□□□□ -1.05
CHM-204ENST00000487515 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
CHM-204ENST00000487515 LMOD2Q6P5Q4 547 aa8.5□□□□□ -1.05
CHM-204ENST00000487515 RANGAP1P46060 587 aaPredicted RBP8.48□□□□□ -1.05
CHM-204ENST00000487515 WDR70Q9NW82 654 aa8.48□□□□□ -1.05
CHM-204ENST00000487515 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
CHM-204ENST00000487515 LSM11P83369 360 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHM-204ENST00000487515 MS4A4AQ96JQ5 239 aa8.47□□□□□ -1.05
CHM-204ENST00000487515 ARSIQ5FYB1 569 aa8.46□□□□□ -1.06
CHM-204ENST00000487515 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
CHM-204ENST00000487515 SUPT5HO00267 1087 aaKnown RBP8.44□□□□□ -1.06
CHM-204ENST00000487515 PBX2P40425 430 aa8.44□□□□□ -1.06
CHM-204ENST00000487515 BRPF1P55201 1214 aaPredicted RBP8.44□□□□□ -1.06
CHM-204ENST00000487515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHM-204ENST00000487515 STK24Q9Y6E0 443 aa8.43□□□□□ -1.06
CHM-204ENST00000487515 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
CHM-204ENST00000487515 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
CHM-204ENST00000487515 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
CHM-204ENST00000487515 KCNV2Q8TDN2 545 aa8.39□□□□□ -1.07
CHM-204ENST00000487515 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
CHM-204ENST00000487515 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHM-204ENST00000487515 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
CHM-204ENST00000487515 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
CHM-204ENST00000487515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.36□□□□□ -1.07
CHM-204ENST00000487515 KIF3CO14782 793 aa8.36□□□□□ -1.07
CHM-204ENST00000487515 ZFP91Q96JP5 570 aaPredicted RBP8.36□□□□□ -1.07
CHM-204ENST00000487515 SLC34A2O95436 690 aa8.35□□□□□ -1.07
CHM-204ENST00000487515 POTEEQ6S8J3 1075 aa8.35□□□□□ -1.07
CHM-204ENST00000487515 NLRP6P59044 892 aa8.34□□□□□ -1.07
CHM-204ENST00000487515 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
CHM-204ENST00000487515 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
CHM-204ENST00000487515 NUDT7P0C024 238 aa8.31□□□□□ -1.08
CHM-204ENST00000487515 LHX6Q9UPM6 363 aa8.3□□□□□ -1.08
CHM-204ENST00000487515 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
CHM-204ENST00000487515 PSDA5PKW4 1024 aaPredicted RBP8.28□□□□□ -1.08
CHM-204ENST00000487515 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
CHM-204ENST00000487515 ADGRD1Q6QNK2 874 aa8.28□□□□□ -1.08
CHM-204ENST00000487515 ARHGEF1Q92888 912 aaKnown RBP8.28□□□□□ -1.08
CHM-204ENST00000487515 AXIN2Q9Y2T1 843 aa8.28□□□□□ -1.08
CHM-204ENST00000487515 PCDHGA4Q9Y5G9 962 aa8.28□□□□□ -1.08
CHM-204ENST00000487515 TK2O00142 265 aa8.27□□□□□ -1.09
CHM-204ENST00000487515 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
CHM-204ENST00000487515 CADPS2Q86UW7 1296 aa8.25□□□□□ -1.09
CHM-204ENST00000487515 HRO43593 1189 aa8.24□□□□□ -1.09
CHM-204ENST00000487515 MFRPQ9BY79 579 aa8.24□□□□□ -1.09
CHM-204ENST00000487515 KDM4FA0A1W2PPD8 638 aa8.23□□□□□ -1.09
CHM-204ENST00000487515 SMYD5Q6GMV2 418 aa8.23□□□□□ -1.09
CHM-204ENST00000487515 UBTFP17480 764 aaKnown RBP8.22□□□□□ -1.09
CHM-204ENST00000487515 RGS20O76081 388 aa8.21□□□□□ -1.1
CHM-204ENST00000487515 E2F4Q16254 413 aa8.21□□□□□ -1.1
CHM-204ENST00000487515 RSPH6AQ9H0K4 717 aa8.21□□□□□ -1.1
CHM-204ENST00000487515 TESPA1A2RU30 521 aaPredicted RBP8.2□□□□□ -1.1
CHM-204ENST00000487515 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
CHM-204ENST00000487515 SEMA3EO15041 775 aa8.18□□□□□ -1.1
CHM-204ENST00000487515 ZMYND10O75800 440 aa8.18□□□□□ -1.1
CHM-204ENST00000487515 IFFO2Q5TF58 517 aa8.18□□□□□ -1.1
CHM-204ENST00000487515 TMC2Q8TDI7 906 aa8.18□□□□□ -1.1
CHM-204ENST00000487515 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
CHM-204ENST00000487515 DMRTA1Q5VZB9 504 aa8.16□□□□□ -1.1
CHM-204ENST00000487515 TRIM26Q12899 539 aaPredicted RBP8.15□□□□□ -1.1
CHM-204ENST00000487515 NPM2Q86SE8 214 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms