RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
RNF220-215ENST00000487332 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
RNF220-215ENST00000487332 CDC42BPBQ9Y5S2 1711 aa16.47■□□□□ 0.23
RNF220-215ENST00000487332 KDM5CP41229 1560 aa16.47■□□□□ 0.23
RNF220-215ENST00000487332 ABCC1P33527 1531 aa16.46■□□□□ 0.23
RNF220-215ENST00000487332 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
RNF220-215ENST00000487332 KDM4FA0A1W2PPD8 638 aa16.45■□□□□ 0.22
RNF220-215ENST00000487332 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
RNF220-215ENST00000487332 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
RNF220-215ENST00000487332 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
RNF220-215ENST00000487332 SCAPERQ9BY12 1400 aa16.45■□□□□ 0.22
RNF220-215ENST00000487332 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
RNF220-215ENST00000487332 ZFYVE16Q7Z3T8 1539 aa16.44■□□□□ 0.22
RNF220-215ENST00000487332 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
RNF220-215ENST00000487332 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
RNF220-215ENST00000487332 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
RNF220-215ENST00000487332 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
RNF220-215ENST00000487332 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
RNF220-215ENST00000487332 HECW2Q9P2P5 1572 aa16.39■□□□□ 0.21
RNF220-215ENST00000487332 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
RNF220-215ENST00000487332 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
RNF220-215ENST00000487332 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
RNF220-215ENST00000487332 ADAMTSL3P82987 1691 aa16.37■□□□□ 0.21
RNF220-215ENST00000487332 MLH3Q9UHC1 1453 aa16.37■□□□□ 0.21
RNF220-215ENST00000487332 BCORL1Q5H9F3 1711 aa16.37■□□□□ 0.21
RNF220-215ENST00000487332 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
RNF220-215ENST00000487332 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
RNF220-215ENST00000487332 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
RNF220-215ENST00000487332 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
RNF220-215ENST00000487332 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
RNF220-215ENST00000487332 C9orf84Q5VXU9 1444 aa16.35■□□□□ 0.21
RNF220-215ENST00000487332 LRRC9Q6ZRR7 1453 aa16.35■□□□□ 0.21
RNF220-215ENST00000487332 ATP10AO60312 1499 aa16.33■□□□□ 0.2
RNF220-215ENST00000487332 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
RNF220-215ENST00000487332 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
RNF220-215ENST00000487332 DIP2CQ9Y2E4 1556 aa16.33■□□□□ 0.2
RNF220-215ENST00000487332 TRAPPC8Q9Y2L5 1435 aa16.32■□□□□ 0.2
RNF220-215ENST00000487332 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
RNF220-215ENST00000487332 ABCA6Q8N139 1617 aa16.3■□□□□ 0.2
RNF220-215ENST00000487332 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
RNF220-215ENST00000487332 AGLP35573 1532 aa16.29■□□□□ 0.2
RNF220-215ENST00000487332 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
RNF220-215ENST00000487332 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
RNF220-215ENST00000487332 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
RNF220-215ENST00000487332 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
RNF220-215ENST00000487332 MBD5Q9P267 1494 aa16.26■□□□□ 0.19
RNF220-215ENST00000487332 PTPRMP28827 1452 aa16.25■□□□□ 0.19
RNF220-215ENST00000487332 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
RNF220-215ENST00000487332 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
RNF220-215ENST00000487332 PLXNC1O60486 1568 aa16.23■□□□□ 0.19
RNF220-215ENST00000487332 ARHGEF5Q12774 1597 aa16.23■□□□□ 0.19
RNF220-215ENST00000487332 RTEL1-TNFRSF6BF6WH68 1400 aa16.22■□□□□ 0.19
RNF220-215ENST00000487332 MIA2Q96PC5 1412 aa16.22■□□□□ 0.19
RNF220-215ENST00000487332 CCDC141Q6ZP82 1450 aa16.22■□□□□ 0.19
RNF220-215ENST00000487332 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
RNF220-215ENST00000487332 FER1L4A9Z1Z3 1794 aa16.21■□□□□ 0.18
RNF220-215ENST00000487332 ZNF777Q9ULD5 760 aaPredicted RBP16.2■□□□□ 0.18
RNF220-215ENST00000487332 RIMS1Q86UR5 1692 aaKnown RBP16.2■□□□□ 0.18
RNF220-215ENST00000487332 MYOM3Q5VTT5 1437 aa16.19■□□□□ 0.18
RNF220-215ENST00000487332 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
RNF220-215ENST00000487332 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
RNF220-215ENST00000487332 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
RNF220-215ENST00000487332 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
RNF220-215ENST00000487332 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
RNF220-215ENST00000487332 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
RNF220-215ENST00000487332 APLP2Q06481 763 aa16.15■□□□□ 0.18
RNF220-215ENST00000487332 A2MP01023 1474 aa16.15■□□□□ 0.18
RNF220-215ENST00000487332 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
RNF220-215ENST00000487332 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
RNF220-215ENST00000487332 FAM135AQ9P2D6 1515 aa16.13■□□□□ 0.17
RNF220-215ENST00000487332 CNTLNQ9NXG0 1405 aa16.12■□□□□ 0.17
RNF220-215ENST00000487332 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
RNF220-215ENST00000487332 MROH2AA6NES4 1674 aa16.11■□□□□ 0.17
RNF220-215ENST00000487332 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
RNF220-215ENST00000487332 PTPN23Q9H3S7 1636 aa16.09■□□□□ 0.17
RNF220-215ENST00000487332 FGD6Q6ZV73 1430 aa16.09■□□□□ 0.17
RNF220-215ENST00000487332 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
RNF220-215ENST00000487332 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
RNF220-215ENST00000487332 DHX29Q7Z478 1369 aaKnown RBP16.07■□□□□ 0.16
RNF220-215ENST00000487332 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
RNF220-215ENST00000487332 MLECQ14165 292 aa16.06■□□□□ 0.16
RNF220-215ENST00000487332 C3P01024 1663 aa16.05■□□□□ 0.16
RNF220-215ENST00000487332 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
RNF220-215ENST00000487332 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
RNF220-215ENST00000487332 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
RNF220-215ENST00000487332 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
RNF220-215ENST00000487332 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
RNF220-215ENST00000487332 NPATQ14207 1427 aa16.02■□□□□ 0.16
RNF220-215ENST00000487332 RNF17Q9BXT8 1623 aaKnown RBP16.02■□□□□ 0.16
RNF220-215ENST00000487332 ABCC5O15440 1437 aa16.01■□□□□ 0.15
RNF220-215ENST00000487332 DAPK1P53355 1430 aa16.01■□□□□ 0.15
RNF220-215ENST00000487332 KDM5DQ9BY66 1539 aa16■□□□□ 0.15
RNF220-215ENST00000487332 DUOX2Q9NRD8 1548 aa16■□□□□ 0.15
RNF220-215ENST00000487332 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
RNF220-215ENST00000487332 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
RNF220-215ENST00000487332 ZC3H13Q5T200 1668 aaKnown RBP15.99■□□□□ 0.15
RNF220-215ENST00000487332 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
RNF220-215ENST00000487332 UHRF1BP1Q6BDS2 1440 aa15.97■□□□□ 0.15
RNF220-215ENST00000487332 ERBINQ96RT1 1412 aa15.97■□□□□ 0.15
RNF220-215ENST00000487332 ZMYM3Q14202 1370 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms