RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
CLIP2-206ENST00000487091 ARHGAP5Q13017 1502 aa30.78■■■□□ 2.52
CLIP2-206ENST00000487091 ADAMTSL3P82987 1691 aa30.78■■■□□ 2.52
CLIP2-206ENST00000487091 ARID4BQ4LE39 1312 aaPredicted RBP30.77■■■□□ 2.52
CLIP2-206ENST00000487091 ZFYVE16Q7Z3T8 1539 aa30.77■■■□□ 2.52
CLIP2-206ENST00000487091 BCORL1Q5H9F3 1711 aa30.75■■■□□ 2.51
CLIP2-206ENST00000487091 YEATS2Q9ULM3 1422 aa30.73■■■□□ 2.51
CLIP2-206ENST00000487091 CDC42BPBQ9Y5S2 1711 aa30.73■■■□□ 2.51
CLIP2-206ENST00000487091 CEP162Q5TB80 1403 aa30.71■■■□□ 2.51
CLIP2-206ENST00000487091 PREX2Q70Z35 1606 aa30.7■■■□□ 2.51
CLIP2-206ENST00000487091 ZNF518AQ6AHZ1 1483 aa30.7■■■□□ 2.5
CLIP2-206ENST00000487091 PTPRMP28827 1452 aa30.68■■■□□ 2.5
CLIP2-206ENST00000487091 AFAP1Q8N556 730 aa30.65■■■□□ 2.5
CLIP2-206ENST00000487091 CDC42BPAQ5VT25 1732 aa30.64■■■□□ 2.5
CLIP2-206ENST00000487091 ATP10AO60312 1499 aa30.63■■■□□ 2.49
CLIP2-206ENST00000487091 KDM5CP41229 1560 aa30.63■■■□□ 2.49
CLIP2-206ENST00000487091 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
CLIP2-206ENST00000487091 MADDQ8WXG6 1647 aa30.62■■■□□ 2.49
CLIP2-206ENST00000487091 SIGLEC1Q9BZZ2 1709 aa30.59■■■□□ 2.49
CLIP2-206ENST00000487091 ABCC1P33527 1531 aa30.59■■■□□ 2.49
CLIP2-206ENST00000487091 C9orf84Q5VXU9 1444 aa30.58■■■□□ 2.49
CLIP2-206ENST00000487091 MTUS2Q5JR59 1369 aa30.58■■■□□ 2.49
CLIP2-206ENST00000487091 GPATCH8Q9UKJ3 1502 aaKnown RBP30.57■■■□□ 2.49
CLIP2-206ENST00000487091 ARHGEF12Q9NZN5 1544 aa30.57■■■□□ 2.48
CLIP2-206ENST00000487091 LOC105371045A0A1W2PR82 267 aa30.56■■■□□ 2.48
CLIP2-206ENST00000487091 MLH3Q9UHC1 1453 aa30.55■■■□□ 2.48
CLIP2-206ENST00000487091 TRAPPC8Q9Y2L5 1435 aa30.54■■■□□ 2.48
CLIP2-206ENST00000487091 ITSN2Q9NZM3 1697 aa30.53■■■□□ 2.48
CLIP2-206ENST00000487091 MYT1LQ9UL68 1186 aa30.53■■■□□ 2.48
CLIP2-206ENST00000487091 RIMS1Q86UR5 1692 aaKnown RBP30.52■■■□□ 2.48
CLIP2-206ENST00000487091 CCNB3Q8WWL7 1395 aa30.51■■■□□ 2.47
CLIP2-206ENST00000487091 ZNF777Q9ULD5 760 aaPredicted RBP30.5■■■□□ 2.47
CLIP2-206ENST00000487091 MLECQ14165 292 aa30.49■■■□□ 2.47
CLIP2-206ENST00000487091 CFDP1Q9UEE9 299 aaPredicted RBP30.48■■■□□ 2.47
CLIP2-206ENST00000487091 SAMD9LQ8IVG5 1584 aa30.48■■■□□ 2.47
CLIP2-206ENST00000487091 EHBP1L1Q8N3D4 1523 aa30.47■■■□□ 2.47
CLIP2-206ENST00000487091 DIP2CQ9Y2E4 1556 aa30.47■■■□□ 2.47
CLIP2-206ENST00000487091 REREQ9P2R6 1566 aa30.46■■■□□ 2.47
CLIP2-206ENST00000487091 KIAA1107Q9UPP5 1409 aa30.44■■■□□ 2.46
CLIP2-206ENST00000487091 PLEKHH2Q8IVE3 1493 aa30.44■■■□□ 2.46
CLIP2-206ENST00000487091 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
CLIP2-206ENST00000487091 ABCA6Q8N139 1617 aa30.43■■■□□ 2.46
CLIP2-206ENST00000487091 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
CLIP2-206ENST00000487091 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
CLIP2-206ENST00000487091 HNRNPMP52272 730 aaKnown RBP eCLIP30.4■■■□□ 2.46
CLIP2-206ENST00000487091 VPS8Q8N3P4 1428 aa30.39■■■□□ 2.46
CLIP2-206ENST00000487091 TIAM1Q13009 1591 aa30.38■■■□□ 2.45
CLIP2-206ENST00000487091 AGLP35573 1532 aa30.37■■■□□ 2.45
CLIP2-206ENST00000487091 SPAG9O60271 1321 aaKnown RBP30.36■■■□□ 2.45
CLIP2-206ENST00000487091 LMTK3Q96Q04 1460 aa30.32■■■□□ 2.44
CLIP2-206ENST00000487091 PLPPR3Q6T4P5 718 aa30.32■■■□□ 2.44
CLIP2-206ENST00000487091 SUPT6HQ7KZ85 1726 aaKnown RBP30.3■■■□□ 2.44
CLIP2-206ENST00000487091 NCOA2Q15596 1464 aa30.29■■■□□ 2.44
CLIP2-206ENST00000487091 ZNF644Q9H582 1327 aaPredicted RBP30.28■■■□□ 2.44
CLIP2-206ENST00000487091 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
CLIP2-206ENST00000487091 INO80Q9ULG1 1556 aaPredicted RBP30.25■■■□□ 2.43
CLIP2-206ENST00000487091 MBD5Q9P267 1494 aa30.25■■■□□ 2.43
CLIP2-206ENST00000487091 MAP3K1Q13233 1512 aa30.24■■■□□ 2.43
CLIP2-206ENST00000487091 LRRC9Q6ZRR7 1453 aa30.24■■■□□ 2.43
CLIP2-206ENST00000487091 CEBPAP49715 358 aaPredicted RBP30.22■■■□□ 2.43
CLIP2-206ENST00000487091 ESF1Q9H501 851 aaKnown RBP30.21■■■□□ 2.43
CLIP2-206ENST00000487091 SETD1BQ9UPS6 1966 aaKnown RBP30.18■■■□□ 2.42
CLIP2-206ENST00000487091 A2MP01023 1474 aa30.18■■■□□ 2.42
CLIP2-206ENST00000487091 RTEL1-TNFRSF6BF6WH68 1400 aa30.17■■■□□ 2.42
CLIP2-206ENST00000487091 RSPH4AQ5TD94 716 aa30.17■■■□□ 2.42
CLIP2-206ENST00000487091 CNTLNQ9NXG0 1405 aa30.16■■■□□ 2.42
CLIP2-206ENST00000487091 PLXNC1O60486 1568 aa30.15■■■□□ 2.42
CLIP2-206ENST00000487091 HSPA2P54652 639 aa30.15■■■□□ 2.42
CLIP2-206ENST00000487091 CAMSAP2Q08AD1 1489 aa30.14■■■□□ 2.42
CLIP2-206ENST00000487091 KANK4Q5T7N3 995 aaPredicted RBP30.13■■■□□ 2.41
CLIP2-206ENST00000487091 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
CLIP2-206ENST00000487091 ADGBQ8N7X0 1667 aa30.12■■■□□ 2.41
CLIP2-206ENST00000487091 CCDC141Q6ZP82 1450 aa30.12■■■□□ 2.41
CLIP2-206ENST00000487091 C3P01024 1663 aa30.11■■■□□ 2.41
CLIP2-206ENST00000487091 UHRF1BP1Q6BDS2 1440 aa30.05■■■□□ 2.4
CLIP2-206ENST00000487091 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
CLIP2-206ENST00000487091 ARHGEF5Q12774 1597 aa30.05■■■□□ 2.4
CLIP2-206ENST00000487091 MROH2AA6NES4 1674 aa30.04■■■□□ 2.4
CLIP2-206ENST00000487091 DHX29Q7Z478 1369 aaKnown RBP30.04■■■□□ 2.4
CLIP2-206ENST00000487091 APLP2Q06481 763 aa30.04■■■□□ 2.4
CLIP2-206ENST00000487091 ILDR1Q86SU0 546 aaPredicted RBP30.04■■■□□ 2.4
CLIP2-206ENST00000487091 TSPY4P0CV99 314 aa30.02■■■□□ 2.4
CLIP2-206ENST00000487091 TSPY10P0CW01 314 aa30.02■■■□□ 2.4
CLIP2-206ENST00000487091 GGT6Q6P531 493 aa30.02■■■□□ 2.4
CLIP2-206ENST00000487091 MIA2Q96PC5 1412 aa30.02■■■□□ 2.4
CLIP2-206ENST00000487091 ZMYM3Q14202 1370 aa30.02■■■□□ 2.4
CLIP2-206ENST00000487091 MYOM3Q5VTT5 1437 aa30.01■■■□□ 2.39
CLIP2-206ENST00000487091 NPATQ14207 1427 aa29.97■■■□□ 2.39
CLIP2-206ENST00000487091 CLTCQ00610 1675 aaKnown RBP29.95■■■□□ 2.39
CLIP2-206ENST00000487091 KIF3BO15066 747 aa29.92■■■□□ 2.38
CLIP2-206ENST00000487091 MAST1Q9Y2H9 1570 aa29.9■■■□□ 2.38
CLIP2-206ENST00000487091 DMRT2Q9Y5R5 561 aa29.88■■■□□ 2.37
CLIP2-206ENST00000487091 STRCQ7RTU9 1775 aa29.87■■■□□ 2.37
CLIP2-206ENST00000487091 PTPRKQ15262 1439 aa29.87■■■□□ 2.37
CLIP2-206ENST00000487091 FAM135AQ9P2D6 1515 aa29.85■■■□□ 2.37
CLIP2-206ENST00000487091 FBXO41Q8TF61 875 aa29.82■■■□□ 2.36
CLIP2-206ENST00000487091 PTPN23Q9H3S7 1636 aa29.8■■■□□ 2.36
CLIP2-206ENST00000487091 KDM5DQ9BY66 1539 aa29.79■■■□□ 2.36
CLIP2-206ENST00000487091 WASHC2CQ9Y4E1 1318 aa29.78■■■□□ 2.36
CLIP2-206ENST00000487091 FGD6Q6ZV73 1430 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms