RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 ADGRL1O94910 1474 aa34.08■■■■□ 3.05
BUD23-217ENST00000487006 RICTORQ6R327 1708 aa34.08■■■■□ 3.05
BUD23-217ENST00000487006 EFCAB2Q5VUJ9 269 aa34.07■■■■□ 3.04
BUD23-217ENST00000487006 DENND4BO75064 1496 aaPredicted RBP34.07■■■■□ 3.04
BUD23-217ENST00000487006 GPATCH8Q9UKJ3 1502 aaKnown RBP34.02■■■■□ 3.04
BUD23-217ENST00000487006 SCAPERQ9BY12 1400 aa34.02■■■■□ 3.04
BUD23-217ENST00000487006 MAP3K1Q13233 1512 aa33.98■■■■□ 3.03
BUD23-217ENST00000487006 LRRC9Q6ZRR7 1453 aa33.97■■■■□ 3.03
BUD23-217ENST00000487006 SUPT6HQ7KZ85 1726 aaKnown RBP33.97■■■■□ 3.03
BUD23-217ENST00000487006 CCNB3Q8WWL7 1395 aa33.97■■■■□ 3.03
BUD23-217ENST00000487006 POGZQ7Z3K3 1410 aa33.96■■■■□ 3.03
BUD23-217ENST00000487006 NCOA2Q15596 1464 aa33.93■■■■□ 3.02
BUD23-217ENST00000487006 ABCC1P33527 1531 aa33.93■■■■□ 3.02
BUD23-217ENST00000487006 KANK4Q5T7N3 995 aaPredicted RBP33.92■■■■□ 3.02
BUD23-217ENST00000487006 ZMYM4Q5VZL5 1548 aa33.92■■■■□ 3.02
BUD23-217ENST00000487006 SAMD9LQ8IVG5 1584 aa33.91■■■■□ 3.02
BUD23-217ENST00000487006 ITSN2Q9NZM3 1697 aa33.9■■■■□ 3.02
BUD23-217ENST00000487006 ARHGEF12Q9NZN5 1544 aa33.89■■■■□ 3.02
BUD23-217ENST00000487006 ZNF777Q9ULD5 760 aaPredicted RBP33.89■■■■□ 3.02
BUD23-217ENST00000487006 ARHGEF40Q8TER5 1519 aa33.88■■■■□ 3.01
BUD23-217ENST00000487006 CFDP1Q9UEE9 299 aaPredicted RBP33.86■■■■□ 3.01
BUD23-217ENST00000487006 ZNF518AQ6AHZ1 1483 aa33.83■■■■□ 3.01
BUD23-217ENST00000487006 APLP2Q06481 763 aa33.83■■■■□ 3.01
BUD23-217ENST00000487006 ZFYVE16Q7Z3T8 1539 aa33.83■■■■□ 3.01
BUD23-217ENST00000487006 YEATS2Q9ULM3 1422 aa33.82■■■■□ 3
BUD23-217ENST00000487006 TRAPPC8Q9Y2L5 1435 aa33.82■■■■□ 3
BUD23-217ENST00000487006 SYCP2Q9BX26 1530 aa33.82■■■■□ 3
BUD23-217ENST00000487006 KDM5CP41229 1560 aa33.81■■■■□ 3
BUD23-217ENST00000487006 AFAP1Q8N556 730 aa33.81■■■■□ 3
BUD23-217ENST00000487006 KDM4FA0A1W2PPD8 638 aa33.8■■■■□ 3
BUD23-217ENST00000487006 MAGI2Q86UL8 1455 aa33.78■■■■□ 3
BUD23-217ENST00000487006 ZNF644Q9H582 1327 aaPredicted RBP33.76■■■□□ 2.99
BUD23-217ENST00000487006 HECW2Q9P2P5 1572 aa33.74■■■□□ 2.99
BUD23-217ENST00000487006 PLEKHH2Q8IVE3 1493 aa33.73■■■□□ 2.99
BUD23-217ENST00000487006 HNRNPMP52272 730 aaKnown RBP eCLIP33.72■■■□□ 2.99
BUD23-217ENST00000487006 KIAA1107Q9UPP5 1409 aa33.7■■■□□ 2.99
BUD23-217ENST00000487006 SIGLEC1Q9BZZ2 1709 aa33.7■■■□□ 2.99
BUD23-217ENST00000487006 AEBP2Q6ZN18 517 aaPredicted RBP33.68■■■□□ 2.98
BUD23-217ENST00000487006 CAMSAP2Q08AD1 1489 aa33.67■■■□□ 2.98
BUD23-217ENST00000487006 MLH3Q9UHC1 1453 aa33.66■■■□□ 2.98
BUD23-217ENST00000487006 MYT1LQ9UL68 1186 aa33.66■■■□□ 2.98
BUD23-217ENST00000487006 ABCA6Q8N139 1617 aa33.65■■■□□ 2.98
BUD23-217ENST00000487006 KIDINS220Q9ULH0 1771 aa33.65■■■□□ 2.98
BUD23-217ENST00000487006 DIP2CQ9Y2E4 1556 aa33.64■■■□□ 2.98
BUD23-217ENST00000487006 MYOM3Q5VTT5 1437 aa33.63■■■□□ 2.97
BUD23-217ENST00000487006 ARID4BQ4LE39 1312 aaPredicted RBP33.63■■■□□ 2.97
BUD23-217ENST00000487006 ATP10AO60312 1499 aa33.63■■■□□ 2.97
BUD23-217ENST00000487006 MBD5Q9P267 1494 aa33.63■■■□□ 2.97
BUD23-217ENST00000487006 BCORL1Q5H9F3 1711 aa33.6■■■□□ 2.97
BUD23-217ENST00000487006 C9orf84Q5VXU9 1444 aa33.6■■■□□ 2.97
BUD23-217ENST00000487006 SPAG9O60271 1321 aaKnown RBP33.56■■■□□ 2.96
BUD23-217ENST00000487006 INO80Q9ULG1 1556 aaPredicted RBP33.56■■■□□ 2.96
BUD23-217ENST00000487006 ADAMTSL3P82987 1691 aa33.55■■■□□ 2.96
BUD23-217ENST00000487006 ATP7AQ04656 1500 aa33.55■■■□□ 2.96
BUD23-217ENST00000487006 MIA2Q96PC5 1412 aa33.53■■■□□ 2.96
BUD23-217ENST00000487006 CCDC141Q6ZP82 1450 aa33.51■■■□□ 2.96
BUD23-217ENST00000487006 REREQ9P2R6 1566 aa33.5■■■□□ 2.95
BUD23-217ENST00000487006 ARHGEF5Q12774 1597 aa33.49■■■□□ 2.95
BUD23-217ENST00000487006 MADDQ8WXG6 1647 aa33.49■■■□□ 2.95
BUD23-217ENST00000487006 PTPN23Q9H3S7 1636 aa33.46■■■□□ 2.95
BUD23-217ENST00000487006 MLECQ14165 292 aa33.45■■■□□ 2.95
BUD23-217ENST00000487006 FGD6Q6ZV73 1430 aa33.45■■■□□ 2.94
BUD23-217ENST00000487006 PPARGC1BQ86YN6 1023 aaKnown RBP33.42■■■□□ 2.94
BUD23-217ENST00000487006 RIMS1Q86UR5 1692 aaKnown RBP33.4■■■□□ 2.94
BUD23-217ENST00000487006 AGLP35573 1532 aa33.38■■■□□ 2.93
BUD23-217ENST00000487006 RTEL1-TNFRSF6BF6WH68 1400 aa33.38■■■□□ 2.93
BUD23-217ENST00000487006 RSPH4AQ5TD94 716 aa33.38■■■□□ 2.93
BUD23-217ENST00000487006 FER1L4A9Z1Z3 1794 aa33.38■■■□□ 2.93
BUD23-217ENST00000487006 ADGBQ8N7X0 1667 aa33.38■■■□□ 2.93
BUD23-217ENST00000487006 TCOF1Q13428 1488 aaKnown RBP33.37■■■□□ 2.93
BUD23-217ENST00000487006 PLXNC1O60486 1568 aa33.36■■■□□ 2.93
BUD23-217ENST00000487006 A2MP01023 1474 aa33.36■■■□□ 2.93
BUD23-217ENST00000487006 PTPRMP28827 1452 aa33.35■■■□□ 2.93
BUD23-217ENST00000487006 MAST1Q9Y2H9 1570 aa33.31■■■□□ 2.92
BUD23-217ENST00000487006 CROCC2H7BZ55 1655 aa33.31■■■□□ 2.92
BUD23-217ENST00000487006 TSPY4P0CV99 314 aa33.3■■■□□ 2.92
BUD23-217ENST00000487006 TSPY10P0CW01 314 aa33.3■■■□□ 2.92
BUD23-217ENST00000487006 DNMT1P26358 1616 aaKnown RBP33.28■■■□□ 2.92
BUD23-217ENST00000487006 ABCC5O15440 1437 aa33.28■■■□□ 2.92
BUD23-217ENST00000487006 DAPK1P53355 1430 aa33.24■■■□□ 2.91
BUD23-217ENST00000487006 DHX29Q7Z478 1369 aaKnown RBP33.21■■■□□ 2.91
BUD23-217ENST00000487006 SHANK2Q9UPX8 1470 aa33.21■■■□□ 2.91
BUD23-217ENST00000487006 FAM50AQ14320 339 aaKnown RBP33.21■■■□□ 2.91
BUD23-217ENST00000487006 PLPPR3Q6T4P5 718 aa33.2■■■□□ 2.91
BUD23-217ENST00000487006 GGT6Q6P531 493 aa33.11■■■□□ 2.89
BUD23-217ENST00000487006 CHIC2Q9UKJ5 165 aa33.1■■■□□ 2.89
BUD23-217ENST00000487006 KIF3BO15066 747 aa33.09■■■□□ 2.89
BUD23-217ENST00000487006 C3P01024 1663 aa33.08■■■□□ 2.89
BUD23-217ENST00000487006 CLTCQ00610 1675 aaKnown RBP33.08■■■□□ 2.89
BUD23-217ENST00000487006 CEBPAP49715 358 aaPredicted RBP33.08■■■□□ 2.89
BUD23-217ENST00000487006 KIF15Q9NS87 1388 aa33.08■■■□□ 2.89
BUD23-217ENST00000487006 ESF1Q9H501 851 aaKnown RBP33.07■■■□□ 2.88
BUD23-217ENST00000487006 DUOX2Q9NRD8 1548 aa33.06■■■□□ 2.88
BUD23-217ENST00000487006 RRP7BPQ9NSQ0 103 aa33.05■■■□□ 2.88
BUD23-217ENST00000487006 CNTLNQ9NXG0 1405 aa33.04■■■□□ 2.88
BUD23-217ENST00000487006 MROH2AA6NES4 1674 aa33.03■■■□□ 2.88
BUD23-217ENST00000487006 EIF2AK4Q9P2K8 1649 aaKnown RBP33.02■■■□□ 2.88
BUD23-217ENST00000487006 PTPRKQ15262 1439 aa33.02■■■□□ 2.88
BUD23-217ENST00000487006 ANKRD30AQ9BXX3 1397 aa33■■■□□ 2.87
BUD23-217ENST00000487006 RNF17Q9BXT8 1623 aaKnown RBP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms