RNA–Protein interactions for RNA: ENST00000486878.2

SCN2A-206, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-206ENST00000486878 KIF3CO14782 793 aa16.27■□□□□ 0.2
SCN2A-206ENST00000486878 TMC2Q8TDI7 906 aa16.27■□□□□ 0.2
SCN2A-206ENST00000486878 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
SCN2A-206ENST00000486878 C2orf72A6NCS6 295 aa16.22■□□□□ 0.19
SCN2A-206ENST00000486878 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
SCN2A-206ENST00000486878 PDE4AP27815 886 aa16.2■□□□□ 0.18
SCN2A-206ENST00000486878 CRISPLD2Q9H0B8 497 aa16.2■□□□□ 0.18
SCN2A-206ENST00000486878 FOXK1P85037 733 aa16.15■□□□□ 0.18
SCN2A-206ENST00000486878 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
SCN2A-206ENST00000486878 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
SCN2A-206ENST00000486878 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
SCN2A-206ENST00000486878 HOXB3P14651 431 aaPredicted RBP16.1■□□□□ 0.17
SCN2A-206ENST00000486878 RIMBP2O15034 1052 aa16.08■□□□□ 0.16
SCN2A-206ENST00000486878 DSG2Q14126 1118 aa16.08■□□□□ 0.16
SCN2A-206ENST00000486878 MFSD10Q14728 455 aa16.08■□□□□ 0.16
SCN2A-206ENST00000486878 LARP6Q9BRS8 491 aaKnown RBP16.08■□□□□ 0.16
SCN2A-206ENST00000486878 PLPP6Q8IY26 295 aa16.06■□□□□ 0.16
SCN2A-206ENST00000486878 DDX27Q96GQ7 796 aaKnown RBP16.06■□□□□ 0.16
SCN2A-206ENST00000486878 ZSWIM6Q9HCJ5 1215 aa16.06■□□□□ 0.16
SCN2A-206ENST00000486878 SLC34A2O95436 690 aa16.05■□□□□ 0.16
SCN2A-206ENST00000486878 PPP1R15BQ5SWA1 713 aa16.05■□□□□ 0.16
SCN2A-206ENST00000486878 FAM163AQ96GL9 167 aaPredicted RBP16.05■□□□□ 0.16
SCN2A-206ENST00000486878 TSHZ2Q9NRE2 1034 aa16.04■□□□□ 0.16
SCN2A-206ENST00000486878 ZNF710Q8N1W2 664 aa16.03■□□□□ 0.16
SCN2A-206ENST00000486878 ST18O60284 1047 aa16■□□□□ 0.15
SCN2A-206ENST00000486878 LCE2DQ5TA82 110 aaPredicted RBP15.96■□□□□ 0.15
SCN2A-206ENST00000486878 HOXB1P14653 301 aaPredicted RBP15.94■□□□□ 0.14
SCN2A-206ENST00000486878 PTCD2Q8WV60 388 aaKnown RBP15.94■□□□□ 0.14
SCN2A-206ENST00000486878 WDR70Q9NW82 654 aa15.93■□□□□ 0.14
SCN2A-206ENST00000486878 HAP1P54257 671 aaPredicted RBP15.91■□□□□ 0.14
SCN2A-206ENST00000486878 GPR153Q6NV75 609 aa15.91■□□□□ 0.14
SCN2A-206ENST00000486878 TBC1D12O60347 775 aa15.89■□□□□ 0.13
SCN2A-206ENST00000486878 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
SCN2A-206ENST00000486878 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
SCN2A-206ENST00000486878 PCDHGA4Q9Y5G9 962 aa15.88■□□□□ 0.13
SCN2A-206ENST00000486878 ARSIQ5FYB1 569 aa15.85■□□□□ 0.13
SCN2A-206ENST00000486878 EMP3P54852 163 aa15.81■□□□□ 0.12
SCN2A-206ENST00000486878 E2F4Q16254 413 aa15.81■□□□□ 0.12
SCN2A-206ENST00000486878 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
SCN2A-206ENST00000486878 UPF1Q92900 1129 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCN2A-206ENST00000486878 MARVELD3Q96A59 401 aa15.78■□□□□ 0.12
SCN2A-206ENST00000486878 POTEMA6NI47 508 aa15.77■□□□□ 0.12
SCN2A-206ENST00000486878 POTEGQ6S5H5 508 aa15.77■□□□□ 0.12
SCN2A-206ENST00000486878 VSIG10Q8N0Z9 540 aa15.77■□□□□ 0.12
SCN2A-206ENST00000486878 KDM4FA0A1W2PPD8 638 aa15.75■□□□□ 0.11
SCN2A-206ENST00000486878 MAP3K9P80192 1104 aa15.75■□□□□ 0.11
SCN2A-206ENST00000486878 NUDT7P0C024 238 aa15.74■□□□□ 0.11
SCN2A-206ENST00000486878 KHSRPQ92945 711 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCN2A-206ENST00000486878 ARIH1Q9Y4X5 557 aaPredicted RBP15.74■□□□□ 0.11
SCN2A-206ENST00000486878 ZNF316A6NFI3 1004 aaPredicted RBP15.73■□□□□ 0.11
SCN2A-206ENST00000486878 ERBB3P21860 1342 aa15.7■□□□□ 0.1
SCN2A-206ENST00000486878 PSDA5PKW4 1024 aaPredicted RBP15.68■□□□□ 0.1
SCN2A-206ENST00000486878 P3H3Q8IVL6 736 aa15.68■□□□□ 0.1
SCN2A-206ENST00000486878 ANO8Q9HCE9 1232 aaPredicted RBP15.68■□□□□ 0.1
SCN2A-206ENST00000486878 FAM205CA6NFA0 338 aa15.67■□□□□ 0.1
SCN2A-206ENST00000486878 EVI5O60447 810 aa15.67■□□□□ 0.1
SCN2A-206ENST00000486878 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
SCN2A-206ENST00000486878 DPYSL4O14531 572 aa15.65■□□□□ 0.1
SCN2A-206ENST00000486878 HS3ST6Q96QI5 342 aa15.65■□□□□ 0.1
SCN2A-206ENST00000486878 SPDYE16A6NNV3 312 aaPredicted RBP15.64■□□□□ 0.09
SCN2A-206ENST00000486878 ARHGEF1Q92888 912 aaKnown RBP15.64■□□□□ 0.09
SCN2A-206ENST00000486878 PCDH10Q9P2E7 1040 aa15.64■□□□□ 0.09
SCN2A-206ENST00000486878 LHX6Q9UPM6 363 aa15.64■□□□□ 0.09
SCN2A-206ENST00000486878 VARS2Q5ST30 1063 aaKnown RBP15.62■□□□□ 0.09
SCN2A-206ENST00000486878 KCNV2Q8TDN2 545 aa15.61■□□□□ 0.09
SCN2A-206ENST00000486878 PDIA6Q15084 440 aa15.6■□□□□ 0.09
SCN2A-206ENST00000486878 POTEB3A0JP26 581 aa15.57■□□□□ 0.08
SCN2A-206ENST00000486878 POTEBQ6S5H4 581 aa15.57■□□□□ 0.08
SCN2A-206ENST00000486878 ZNF687Q8N1G0 1237 aa15.56■□□□□ 0.08
SCN2A-206ENST00000486878 PTGER2P43116 358 aa15.55■□□□□ 0.08
SCN2A-206ENST00000486878 PPP4R3BQ5MIZ7 849 aa15.54■□□□□ 0.08
SCN2A-206ENST00000486878 CDAN1Q8IWY9 1227 aa15.54■□□□□ 0.08
SCN2A-206ENST00000486878 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
SCN2A-206ENST00000486878 FOSBP53539 338 aa15.52■□□□□ 0.08
SCN2A-206ENST00000486878 ZNF454Q8N9F8 522 aa15.49■□□□□ 0.07
SCN2A-206ENST00000486878 PHF14O94880 888 aa15.48■□□□□ 0.07
SCN2A-206ENST00000486878 PBX2P40425 430 aa15.48■□□□□ 0.07
SCN2A-206ENST00000486878 EPAS1Q99814 870 aa15.46■□□□□ 0.07
SCN2A-206ENST00000486878 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
SCN2A-206ENST00000486878 ZDHHC16Q969W1 377 aa15.44■□□□□ 0.06
SCN2A-206ENST00000486878 PCDHGA10Q9Y5H3 936 aa15.44■□□□□ 0.06
SCN2A-206ENST00000486878 TYW1BQ6NUM6 668 aa15.43■□□□□ 0.06
SCN2A-206ENST00000486878 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
SCN2A-206ENST00000486878 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
SCN2A-206ENST00000486878 DDX12PQ92771 950 aa15.4■□□□□ 0.06
SCN2A-206ENST00000486878 KCNH8Q96L42 1107 aa15.39■□□□□ 0.05
SCN2A-206ENST00000486878 ARHGAP33O14559 1287 aa15.38■□□□□ 0.05
SCN2A-206ENST00000486878 KRTAP3-3Q9BYR6 98 aa15.38■□□□□ 0.05
SCN2A-206ENST00000486878 KRTAP3-2Q9BYR7 98 aa15.38■□□□□ 0.05
SCN2A-206ENST00000486878 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
SCN2A-206ENST00000486878 PTPREP23469 700 aa15.34■□□□□ 0.05
SCN2A-206ENST00000486878 POTEEQ6S8J3 1075 aa15.34■□□□□ 0.05
SCN2A-206ENST00000486878 GRXCR2A6NFK2 248 aa15.33■□□□□ 0.04
SCN2A-206ENST00000486878 NBR1Q14596 966 aa15.33■□□□□ 0.04
SCN2A-206ENST00000486878 LSM11P83369 360 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCN2A-206ENST00000486878 EN1Q05925 392 aaPredicted RBP15.3■□□□□ 0.04
SCN2A-206ENST00000486878 KCNK17Q96T54 332 aa15.3■□□□□ 0.04
SCN2A-206ENST00000486878 SEMA3EO15041 775 aa15.29■□□□□ 0.04
SCN2A-206ENST00000486878 AXIN2Q9Y2T1 843 aa15.29■□□□□ 0.04
SCN2A-206ENST00000486878 OSBPP22059 807 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms