RNA–Protein interactions for RNA: ENST00000486539.1

CACNA2D1-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

TSL 5

Gene CACNA2D1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-211ENST00000486539 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
CACNA2D1-211ENST00000486539 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
CACNA2D1-211ENST00000486539 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
CACNA2D1-211ENST00000486539 SOX12O15370 315 aa13.78□□□□□ -0.2
CACNA2D1-211ENST00000486539 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
CACNA2D1-211ENST00000486539 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
CACNA2D1-211ENST00000486539 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
CACNA2D1-211ENST00000486539 RGS20O76081 388 aa13.59□□□□□ -0.23
CACNA2D1-211ENST00000486539 ADGRD1Q6QNK2 874 aa13.59□□□□□ -0.23
CACNA2D1-211ENST00000486539 NUDT7P0C024 238 aa13.58□□□□□ -0.24
CACNA2D1-211ENST00000486539 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
CACNA2D1-211ENST00000486539 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
CACNA2D1-211ENST00000486539 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
CACNA2D1-211ENST00000486539 IFNLR1Q8IU57 520 aaPredicted RBP13.57□□□□□ -0.24
CACNA2D1-211ENST00000486539 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
CACNA2D1-211ENST00000486539 LHX6Q9UPM6 363 aa13.56□□□□□ -0.24
CACNA2D1-211ENST00000486539 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
CACNA2D1-211ENST00000486539 TK2O00142 265 aa13.53□□□□□ -0.24
CACNA2D1-211ENST00000486539 SLC34A2O95436 690 aa13.53□□□□□ -0.24
CACNA2D1-211ENST00000486539 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
CACNA2D1-211ENST00000486539 NLRP6P59044 892 aa13.51□□□□□ -0.25
CACNA2D1-211ENST00000486539 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
CACNA2D1-211ENST00000486539 KIF3CO14782 793 aa13.48□□□□□ -0.25
CACNA2D1-211ENST00000486539 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
CACNA2D1-211ENST00000486539 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
CACNA2D1-211ENST00000486539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
CACNA2D1-211ENST00000486539 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
CACNA2D1-211ENST00000486539 HRO43593 1189 aa13.45□□□□□ -0.26
CACNA2D1-211ENST00000486539 C2orf72A6NCS6 295 aa13.43□□□□□ -0.26
CACNA2D1-211ENST00000486539 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
CACNA2D1-211ENST00000486539 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
CACNA2D1-211ENST00000486539 KCTD12Q96CX2 325 aaKnown RBP13.41□□□□□ -0.26
CACNA2D1-211ENST00000486539 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
CACNA2D1-211ENST00000486539 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
CACNA2D1-211ENST00000486539 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
CACNA2D1-211ENST00000486539 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
CACNA2D1-211ENST00000486539 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
CACNA2D1-211ENST00000486539 KCNH8Q96L42 1107 aa13.31□□□□□ -0.28
CACNA2D1-211ENST00000486539 PSEN2P49810 448 aa13.29□□□□□ -0.28
CACNA2D1-211ENST00000486539 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
CACNA2D1-211ENST00000486539 A0A0G2JS52 829 aa13.27□□□□□ -0.29
CACNA2D1-211ENST00000486539 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
CACNA2D1-211ENST00000486539 PTPN5P54829 565 aa13.24□□□□□ -0.29
CACNA2D1-211ENST00000486539 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
CACNA2D1-211ENST00000486539 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
CACNA2D1-211ENST00000486539 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
CACNA2D1-211ENST00000486539 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
CACNA2D1-211ENST00000486539 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
CACNA2D1-211ENST00000486539 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
CACNA2D1-211ENST00000486539 TBC1D12O60347 775 aa13.14□□□□□ -0.31
CACNA2D1-211ENST00000486539 THSD4Q6ZMP0 1018 aa13.14□□□□□ -0.31
CACNA2D1-211ENST00000486539 SLC4A5Q9BY07 1137 aa13.13□□□□□ -0.31
CACNA2D1-211ENST00000486539 Q6ZNB5 142 aa13.11□□□□□ -0.31
CACNA2D1-211ENST00000486539 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
CACNA2D1-211ENST00000486539 STK25O00506 426 aa13.07□□□□□ -0.32
CACNA2D1-211ENST00000486539 WNT2BQ93097 391 aa13.05□□□□□ -0.32
CACNA2D1-211ENST00000486539 FOXK1P85037 733 aa13.04□□□□□ -0.32
CACNA2D1-211ENST00000486539 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
CACNA2D1-211ENST00000486539 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
CACNA2D1-211ENST00000486539 LAPTM4AQ15012 233 aa13□□□□□ -0.33
CACNA2D1-211ENST00000486539 PLPP6Q8IY26 295 aa13□□□□□ -0.33
CACNA2D1-211ENST00000486539 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
CACNA2D1-211ENST00000486539 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
CACNA2D1-211ENST00000486539 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
CACNA2D1-211ENST00000486539 PTPREP23469 700 aa12.95□□□□□ -0.34
CACNA2D1-211ENST00000486539 GPHNQ9NQX3 736 aaPredicted RBP12.95□□□□□ -0.34
CACNA2D1-211ENST00000486539 ZNF454Q8N9F8 522 aa12.93□□□□□ -0.34
CACNA2D1-211ENST00000486539 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
CACNA2D1-211ENST00000486539 PPP1R37O75864 691 aa12.88□□□□□ -0.35
CACNA2D1-211ENST00000486539 DSG2Q14126 1118 aa12.87□□□□□ -0.35
CACNA2D1-211ENST00000486539 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
CACNA2D1-211ENST00000486539 TRAF7Q6Q0C0 670 aa12.84□□□□□ -0.35
CACNA2D1-211ENST00000486539 OXER1Q8TDS5 423 aa12.84□□□□□ -0.35
CACNA2D1-211ENST00000486539 FOSBP53539 338 aa12.83□□□□□ -0.36
CACNA2D1-211ENST00000486539 ANKK1Q8NFD2 765 aa12.83□□□□□ -0.36
CACNA2D1-211ENST00000486539 KCNC4Q03721 635 aa12.78□□□□□ -0.36
CACNA2D1-211ENST00000486539 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
CACNA2D1-211ENST00000486539 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
CACNA2D1-211ENST00000486539 GFRA3O60609 400 aa12.74□□□□□ -0.37
CACNA2D1-211ENST00000486539 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
CACNA2D1-211ENST00000486539 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
CACNA2D1-211ENST00000486539 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNA2D1-211ENST00000486539 LCE2BO14633 110 aa12.72□□□□□ -0.37
CACNA2D1-211ENST00000486539 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
CACNA2D1-211ENST00000486539 SOWAHBA6NEL2 793 aa12.71□□□□□ -0.37
CACNA2D1-211ENST00000486539 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
CACNA2D1-211ENST00000486539 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CACNA2D1-211ENST00000486539 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
CACNA2D1-211ENST00000486539 NRG2O14511 850 aaPredicted RBP12.67□□□□□ -0.38
CACNA2D1-211ENST00000486539 BCAMP50895 628 aa12.67□□□□□ -0.38
CACNA2D1-211ENST00000486539 EVI5O60447 810 aa12.61□□□□□ -0.39
CACNA2D1-211ENST00000486539 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
CACNA2D1-211ENST00000486539 RGL2O15211 777 aa12.6□□□□□ -0.39
CACNA2D1-211ENST00000486539 PPP1R15BQ5SWA1 713 aa12.6□□□□□ -0.39
CACNA2D1-211ENST00000486539 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
CACNA2D1-211ENST00000486539 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
CACNA2D1-211ENST00000486539 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
CACNA2D1-211ENST00000486539 PROX2Q3B8N5 592 aa12.57□□□□□ -0.4
CACNA2D1-211ENST00000486539 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
CACNA2D1-211ENST00000486539 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms