RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
USP41-204ENST00000486536 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
USP41-204ENST00000486536 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
USP41-204ENST00000486536 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
USP41-204ENST00000486536 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
USP41-204ENST00000486536 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
USP41-204ENST00000486536 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
USP41-204ENST00000486536 TMEM106CQ9BVX2 250 aa10.29□□□□□ -0.76
USP41-204ENST00000486536 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
USP41-204ENST00000486536 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
USP41-204ENST00000486536 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
USP41-204ENST00000486536 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
USP41-204ENST00000486536 PEG3Q9GZU2 1588 aa10.23□□□□□ -0.77
USP41-204ENST00000486536 MLLT3P42568 568 aaPredicted RBP10.23□□□□□ -0.77
USP41-204ENST00000486536 RBM26Q5T8P6 1007 aaKnown RBP10.23□□□□□ -0.77
USP41-204ENST00000486536 AK7Q96M32 723 aa10.23□□□□□ -0.77
USP41-204ENST00000486536 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
USP41-204ENST00000486536 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
USP41-204ENST00000486536 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
USP41-204ENST00000486536 ATAD2BQ9ULI0 1458 aa10.2□□□□□ -0.78
USP41-204ENST00000486536 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
USP41-204ENST00000486536 SMARCA2P51531 1590 aa10.19□□□□□ -0.78
USP41-204ENST00000486536 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
USP41-204ENST00000486536 WIZO95785 1651 aa10.18□□□□□ -0.78
USP41-204ENST00000486536 HOMEZQ8IX15 550 aa10.18□□□□□ -0.78
USP41-204ENST00000486536 MS4A3Q96HJ5 214 aa10.17□□□□□ -0.78
USP41-204ENST00000486536 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
USP41-204ENST00000486536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.78
USP41-204ENST00000486536 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
USP41-204ENST00000486536 NCAPD3P42695 1498 aa10.16□□□□□ -0.78
USP41-204ENST00000486536 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.78
USP41-204ENST00000486536 GPBP1L1Q9HC44 474 aaPredicted RBP10.15□□□□□ -0.78
USP41-204ENST00000486536 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
USP41-204ENST00000486536 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
USP41-204ENST00000486536 DPYSL4O14531 572 aa10.13□□□□□ -0.79
USP41-204ENST00000486536 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
USP41-204ENST00000486536 BAZ1BQ9UIG0 1483 aaKnown RBP10.12□□□□□ -0.79
USP41-204ENST00000486536 TTLL13PA6NNM8 815 aa10.11□□□□□ -0.79
USP41-204ENST00000486536 TRIM66O15016 1216 aa10.11□□□□□ -0.79
USP41-204ENST00000486536 TIE1P35590 1138 aa10.11□□□□□ -0.79
USP41-204ENST00000486536 DSG2Q14126 1118 aa10.11□□□□□ -0.79
USP41-204ENST00000486536 HMGXB3Q12766 1538 aa10.11□□□□□ -0.79
USP41-204ENST00000486536 KDM4CQ9H3R0 1056 aa10.1□□□□□ -0.79
USP41-204ENST00000486536 PDIA6Q15084 440 aa10.09□□□□□ -0.79
USP41-204ENST00000486536 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
USP41-204ENST00000486536 PDE4DQ08499 809 aa10.08□□□□□ -0.8
USP41-204ENST00000486536 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
USP41-204ENST00000486536 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
USP41-204ENST00000486536 CCDC88BA6NC98 1476 aa10.05□□□□□ -0.8
USP41-204ENST00000486536 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
USP41-204ENST00000486536 FOXK1P85037 733 aa10.05□□□□□ -0.8
USP41-204ENST00000486536 MICALL2Q8IY33 904 aa10.05□□□□□ -0.8
USP41-204ENST00000486536 TRIM35Q9UPQ4 493 aa10.04□□□□□ -0.8
USP41-204ENST00000486536 PLPP6Q8IY26 295 aa10.02□□□□□ -0.81
USP41-204ENST00000486536 CUX2O14529 1486 aa10.02□□□□□ -0.81
USP41-204ENST00000486536 GPR37O15354 613 aa10.01□□□□□ -0.81
USP41-204ENST00000486536 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
USP41-204ENST00000486536 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
USP41-204ENST00000486536 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
USP41-204ENST00000486536 MAP3K9P80192 1104 aa10□□□□□ -0.81
USP41-204ENST00000486536 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
USP41-204ENST00000486536 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
USP41-204ENST00000486536 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
USP41-204ENST00000486536 C2orf72A6NCS6 295 aa9.97□□□□□ -0.81
USP41-204ENST00000486536 PDCD7Q8N8D1 485 aaKnown RBP9.97□□□□□ -0.81
USP41-204ENST00000486536 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
USP41-204ENST00000486536 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
USP41-204ENST00000486536 IRF6O14896 467 aa9.95□□□□□ -0.82
USP41-204ENST00000486536 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
USP41-204ENST00000486536 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
USP41-204ENST00000486536 KIF3CO14782 793 aa9.94□□□□□ -0.82
USP41-204ENST00000486536 OSBPP22059 807 aa9.94□□□□□ -0.82
USP41-204ENST00000486536 MAP2K5Q13163 448 aa9.94□□□□□ -0.82
USP41-204ENST00000486536 CCDC102AQ96A19 550 aa9.93□□□□□ -0.82
USP41-204ENST00000486536 RSPH6AQ9H0K4 717 aa9.93□□□□□ -0.82
USP41-204ENST00000486536 OCEL1Q9H607 264 aa9.93□□□□□ -0.82
USP41-204ENST00000486536 G3V3G9 751 aa9.92□□□□□ -0.82
USP41-204ENST00000486536 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
USP41-204ENST00000486536 PLEKHG3A1L390 1219 aa9.91□□□□□ -0.82
USP41-204ENST00000486536 GNPATO15228 680 aa9.91□□□□□ -0.82
USP41-204ENST00000486536 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
USP41-204ENST00000486536 PTGER2P43116 358 aa9.9□□□□□ -0.82
USP41-204ENST00000486536 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
USP41-204ENST00000486536 AMHR2Q16671 573 aa9.9□□□□□ -0.82
USP41-204ENST00000486536 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.82
USP41-204ENST00000486536 FCHSD2O94868 740 aa9.89□□□□□ -0.83
USP41-204ENST00000486536 CFTRP13569 1480 aa9.89□□□□□ -0.83
USP41-204ENST00000486536 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
USP41-204ENST00000486536 FECHP22830 423 aa9.88□□□□□ -0.83
USP41-204ENST00000486536 HIC1Q14526 733 aa9.88□□□□□ -0.83
USP41-204ENST00000486536 PARP9Q8IXQ6 854 aa9.88□□□□□ -0.83
USP41-204ENST00000486536 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
USP41-204ENST00000486536 DDX12PQ92771 950 aa9.88□□□□□ -0.83
USP41-204ENST00000486536 IER5LQ5T953 404 aa9.87□□□□□ -0.83
USP41-204ENST00000486536 TBC1D12O60347 775 aa9.86□□□□□ -0.83
USP41-204ENST00000486536 CLCN6P51797 869 aa9.86□□□□□ -0.83
USP41-204ENST00000486536 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
USP41-204ENST00000486536 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
USP41-204ENST00000486536 PLCG2P16885 1265 aa9.83□□□□□ -0.84
USP41-204ENST00000486536 UBTFP17480 764 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms