RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 LRRC9Q6ZRR7 1453 aa11.04□□□□□ -0.64
TMC1-204ENST00000486417 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
TMC1-204ENST00000486417 NUP160Q12769 1436 aa11.03□□□□□ -0.64
TMC1-204ENST00000486417 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
TMC1-204ENST00000486417 DISP1Q96F81 1524 aa11.02□□□□□ -0.65
TMC1-204ENST00000486417 RRBP1Q9P2E9 1410 aaKnown RBP11.01□□□□□ -0.65
TMC1-204ENST00000486417 CHMP7Q8WUX9 453 aaPredicted RBP10.99□□□□□ -0.65
TMC1-204ENST00000486417 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
TMC1-204ENST00000486417 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
TMC1-204ENST00000486417 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
TMC1-204ENST00000486417 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
TMC1-204ENST00000486417 RAPGEF6Q8TEU7 1601 aa10.97□□□□□ -0.65
TMC1-204ENST00000486417 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.65
TMC1-204ENST00000486417 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
TMC1-204ENST00000486417 BCANQ96GW7 911 aa10.95□□□□□ -0.66
TMC1-204ENST00000486417 ZBTB47Q9UFB7 747 aaPredicted RBP10.95□□□□□ -0.66
TMC1-204ENST00000486417 NUBP1P53384 320 aa10.94□□□□□ -0.66
TMC1-204ENST00000486417 PAXIP1Q6ZW49 1069 aaPredicted RBP10.94□□□□□ -0.66
TMC1-204ENST00000486417 AKT1S1Q96B36 256 aa10.94□□□□□ -0.66
TMC1-204ENST00000486417 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
TMC1-204ENST00000486417 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
TMC1-204ENST00000486417 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
TMC1-204ENST00000486417 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
TMC1-204ENST00000486417 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
TMC1-204ENST00000486417 MAGI3Q5TCQ9 1506 aa10.93□□□□□ -0.66
TMC1-204ENST00000486417 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
TMC1-204ENST00000486417 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
TMC1-204ENST00000486417 PRKCSHP14314 528 aaPredicted RBP10.93□□□□□ -0.66
TMC1-204ENST00000486417 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
TMC1-204ENST00000486417 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
TMC1-204ENST00000486417 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
TMC1-204ENST00000486417 CDK13Q14004 1512 aaKnown RBP10.93□□□□□ -0.66
TMC1-204ENST00000486417 ZEB1P37275 1124 aaPredicted RBP10.92□□□□□ -0.66
TMC1-204ENST00000486417 ARHGEF11O15085 1522 aa10.91□□□□□ -0.66
TMC1-204ENST00000486417 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
TMC1-204ENST00000486417 CARMIL2Q6F5E8 1435 aa10.91□□□□□ -0.66
TMC1-204ENST00000486417 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.66
TMC1-204ENST00000486417 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
TMC1-204ENST00000486417 KDM2AQ9Y2K7 1162 aa10.9□□□□□ -0.66
TMC1-204ENST00000486417 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
TMC1-204ENST00000486417 NUP153P49790 1475 aaKnown RBP10.9□□□□□ -0.66
TMC1-204ENST00000486417 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
TMC1-204ENST00000486417 NCOA2Q15596 1464 aa10.89□□□□□ -0.67
TMC1-204ENST00000486417 ABCA8O94911 1581 aa10.88□□□□□ -0.67
TMC1-204ENST00000486417 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
TMC1-204ENST00000486417 CLASP1Q7Z460 1538 aa10.88□□□□□ -0.67
TMC1-204ENST00000486417 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
TMC1-204ENST00000486417 CCER1Q8TC90 406 aaPredicted RBP10.86□□□□□ -0.67
TMC1-204ENST00000486417 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
TMC1-204ENST00000486417 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
TMC1-204ENST00000486417 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
TMC1-204ENST00000486417 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
TMC1-204ENST00000486417 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
TMC1-204ENST00000486417 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
TMC1-204ENST00000486417 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
TMC1-204ENST00000486417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
TMC1-204ENST00000486417 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
TMC1-204ENST00000486417 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
TMC1-204ENST00000486417 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
TMC1-204ENST00000486417 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
TMC1-204ENST00000486417 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
TMC1-204ENST00000486417 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
TMC1-204ENST00000486417 ITSN2Q9NZM3 1697 aa10.81□□□□□ -0.68
TMC1-204ENST00000486417 TCOF1Q13428 1488 aaKnown RBP10.81□□□□□ -0.68
TMC1-204ENST00000486417 GSE1Q14687 1217 aa10.81□□□□□ -0.68
TMC1-204ENST00000486417 SPRYD3Q8NCJ5 442 aa10.8□□□□□ -0.68
TMC1-204ENST00000486417 KIF14Q15058 1648 aa10.79□□□□□ -0.68
TMC1-204ENST00000486417 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
TMC1-204ENST00000486417 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
TMC1-204ENST00000486417 ARID3CA6NKF2 412 aa10.78□□□□□ -0.68
TMC1-204ENST00000486417 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
TMC1-204ENST00000486417 MIA2Q96PC5 1412 aa10.77□□□□□ -0.69
TMC1-204ENST00000486417 PTPRGP23470 1445 aa10.76□□□□□ -0.69
TMC1-204ENST00000486417 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
TMC1-204ENST00000486417 ITGAEP38570 1179 aa10.76□□□□□ -0.69
TMC1-204ENST00000486417 ABCC2Q92887 1545 aa10.76□□□□□ -0.69
TMC1-204ENST00000486417 ATP10BO94823 1461 aa10.75□□□□□ -0.69
TMC1-204ENST00000486417 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
TMC1-204ENST00000486417 SETD5Q9C0A6 1442 aa10.75□□□□□ -0.69
TMC1-204ENST00000486417 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
TMC1-204ENST00000486417 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
TMC1-204ENST00000486417 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
TMC1-204ENST00000486417 DNMT1P26358 1616 aaKnown RBP10.74□□□□□ -0.69
TMC1-204ENST00000486417 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
TMC1-204ENST00000486417 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
TMC1-204ENST00000486417 CDK11AQ9UQ88 783 aaPredicted RBP10.74□□□□□ -0.69
TMC1-204ENST00000486417 UACAQ9BZF9 1416 aa10.73□□□□□ -0.69
TMC1-204ENST00000486417 PTPRKQ15262 1439 aa10.73□□□□□ -0.69
TMC1-204ENST00000486417 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
TMC1-204ENST00000486417 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
TMC1-204ENST00000486417 ZCCHC11Q5TAX3 1644 aaKnown RBP10.71□□□□□ -0.69
TMC1-204ENST00000486417 ABCC10Q5T3U5 1492 aa10.71□□□□□ -0.69
TMC1-204ENST00000486417 HFM1A2PYH4 1435 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 ADGBQ8N7X0 1667 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 PYGBP11216 843 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 AKNAQ7Z591 1439 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 UHRF1BP1LA0JNW5 1464 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 CAMSAP2Q08AD1 1489 aa10.7□□□□□ -0.7
TMC1-204ENST00000486417 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms