RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
POLR2J3-204ENST00000486319 MTUS2Q5JR59 1369 aa22.15■■□□□ 1.14
POLR2J3-204ENST00000486319 DENND4BO75064 1496 aaPredicted RBP22.14■■□□□ 1.13
POLR2J3-204ENST00000486319 CFAP74Q9C0B2 1584 aa22.13■■□□□ 1.13
POLR2J3-204ENST00000486319 RRBP1Q9P2E9 1410 aaKnown RBP22.11■■□□□ 1.13
POLR2J3-204ENST00000486319 ADGRL1O94910 1474 aa22.1■■□□□ 1.13
POLR2J3-204ENST00000486319 SCAPERQ9BY12 1400 aa22.1■■□□□ 1.13
POLR2J3-204ENST00000486319 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
POLR2J3-204ENST00000486319 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
POLR2J3-204ENST00000486319 KDM4FA0A1W2PPD8 638 aa22.08■■□□□ 1.13
POLR2J3-204ENST00000486319 EHBP1L1Q8N3D4 1523 aa22.04■■□□□ 1.12
POLR2J3-204ENST00000486319 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
POLR2J3-204ENST00000486319 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
POLR2J3-204ENST00000486319 ZNF777Q9ULD5 760 aaPredicted RBP22.02■■□□□ 1.12
POLR2J3-204ENST00000486319 SUPT6HQ7KZ85 1726 aaKnown RBP22.02■■□□□ 1.12
POLR2J3-204ENST00000486319 POGZQ7Z3K3 1410 aa22.02■■□□□ 1.11
POLR2J3-204ENST00000486319 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
POLR2J3-204ENST00000486319 GPATCH8Q9UKJ3 1502 aaKnown RBP22.01■■□□□ 1.11
POLR2J3-204ENST00000486319 AFAP1Q8N556 730 aa22■■□□□ 1.11
POLR2J3-204ENST00000486319 PREX2Q70Z35 1606 aa22■■□□□ 1.11
POLR2J3-204ENST00000486319 RICTORQ6R327 1708 aa21.99■■□□□ 1.11
POLR2J3-204ENST00000486319 CDC42BPBQ9Y5S2 1711 aa21.99■■□□□ 1.11
POLR2J3-204ENST00000486319 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
POLR2J3-204ENST00000486319 MAGI2Q86UL8 1455 aa21.96■■□□□ 1.11
POLR2J3-204ENST00000486319 ARID4BQ4LE39 1312 aaPredicted RBP21.96■■□□□ 1.11
POLR2J3-204ENST00000486319 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
POLR2J3-204ENST00000486319 MYT1LQ9UL68 1186 aa21.96■■□□□ 1.11
POLR2J3-204ENST00000486319 CDC42BPAQ5VT25 1732 aa21.95■■□□□ 1.1
POLR2J3-204ENST00000486319 ZMYM4Q5VZL5 1548 aa21.95■■□□□ 1.1
POLR2J3-204ENST00000486319 YEATS2Q9ULM3 1422 aa21.93■■□□□ 1.1
POLR2J3-204ENST00000486319 ZFYVE16Q7Z3T8 1539 aa21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 ARHGEF12Q9NZN5 1544 aa21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 TRAPPC8Q9Y2L5 1435 aa21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 ABCC1P33527 1531 aa21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
POLR2J3-204ENST00000486319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.09
POLR2J3-204ENST00000486319 ZNF644Q9H582 1327 aaPredicted RBP21.87■■□□□ 1.09
POLR2J3-204ENST00000486319 KIAA1107Q9UPP5 1409 aa21.87■■□□□ 1.09
POLR2J3-204ENST00000486319 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
POLR2J3-204ENST00000486319 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
POLR2J3-204ENST00000486319 KDM5CP41229 1560 aa21.86■■□□□ 1.09
POLR2J3-204ENST00000486319 MYOM3Q5VTT5 1437 aa21.85■■□□□ 1.09
POLR2J3-204ENST00000486319 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
POLR2J3-204ENST00000486319 ATP10AO60312 1499 aa21.85■■□□□ 1.09
POLR2J3-204ENST00000486319 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
POLR2J3-204ENST00000486319 MLH3Q9UHC1 1453 aa21.84■■□□□ 1.09
POLR2J3-204ENST00000486319 CCER1Q8TC90 406 aaPredicted RBP21.84■■□□□ 1.09
POLR2J3-204ENST00000486319 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
POLR2J3-204ENST00000486319 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-204ENST00000486319 HECW2Q9P2P5 1572 aa21.81■■□□□ 1.08
POLR2J3-204ENST00000486319 C9orf84Q5VXU9 1444 aa21.81■■□□□ 1.08
POLR2J3-204ENST00000486319 FAM50AQ14320 339 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-204ENST00000486319 MLECQ14165 292 aa21.79■■□□□ 1.08
POLR2J3-204ENST00000486319 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.08
POLR2J3-204ENST00000486319 RSPH4AQ5TD94 716 aa21.76■■□□□ 1.07
POLR2J3-204ENST00000486319 MBD5Q9P267 1494 aa21.76■■□□□ 1.07
POLR2J3-204ENST00000486319 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
POLR2J3-204ENST00000486319 BCORL1Q5H9F3 1711 aa21.74■■□□□ 1.07
POLR2J3-204ENST00000486319 CAMSAP2Q08AD1 1489 aa21.74■■□□□ 1.07
POLR2J3-204ENST00000486319 ITGAEP38570 1179 aa21.74■■□□□ 1.07
POLR2J3-204ENST00000486319 DIP2CQ9Y2E4 1556 aa21.73■■□□□ 1.07
POLR2J3-204ENST00000486319 ADAMTSL3P82987 1691 aa21.73■■□□□ 1.07
POLR2J3-204ENST00000486319 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-204ENST00000486319 KIDINS220Q9ULH0 1771 aa21.71■■□□□ 1.07
POLR2J3-204ENST00000486319 SIGLEC1Q9BZZ2 1709 aa21.71■■□□□ 1.07
POLR2J3-204ENST00000486319 ABCA6Q8N139 1617 aa21.71■■□□□ 1.07
POLR2J3-204ENST00000486319 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
POLR2J3-204ENST00000486319 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
POLR2J3-204ENST00000486319 PTPRMP28827 1452 aa21.7■■□□□ 1.06
POLR2J3-204ENST00000486319 ATP7AQ04656 1500 aa21.69■■□□□ 1.06
POLR2J3-204ENST00000486319 CCDC141Q6ZP82 1450 aa21.68■■□□□ 1.06
POLR2J3-204ENST00000486319 REREQ9P2R6 1566 aa21.68■■□□□ 1.06
POLR2J3-204ENST00000486319 MADDQ8WXG6 1647 aa21.67■■□□□ 1.06
POLR2J3-204ENST00000486319 RTEL1-TNFRSF6BF6WH68 1400 aa21.66■■□□□ 1.06
POLR2J3-204ENST00000486319 INO80Q9ULG1 1556 aaPredicted RBP21.64■■□□□ 1.06
POLR2J3-204ENST00000486319 SETD5Q9C0A6 1442 aa21.64■■□□□ 1.05
POLR2J3-204ENST00000486319 AGLP35573 1532 aa21.64■■□□□ 1.05
POLR2J3-204ENST00000486319 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
POLR2J3-204ENST00000486319 A2MP01023 1474 aa21.63■■□□□ 1.05
POLR2J3-204ENST00000486319 ESF1Q9H501 851 aaKnown RBP21.62■■□□□ 1.05
POLR2J3-204ENST00000486319 ARHGEF5Q12774 1597 aa21.61■■□□□ 1.05
POLR2J3-204ENST00000486319 RAB3GAP2Q9H2M9 1393 aa21.6■■□□□ 1.05
POLR2J3-204ENST00000486319 RIMS1Q86UR5 1692 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-204ENST00000486319 DHX29Q7Z478 1369 aaKnown RBP21.58■■□□□ 1.05
POLR2J3-204ENST00000486319 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
POLR2J3-204ENST00000486319 DHX57Q6P158 1386 aaKnown RBP21.57■■□□□ 1.04
POLR2J3-204ENST00000486319 GGT6Q6P531 493 aa21.56■■□□□ 1.04
POLR2J3-204ENST00000486319 PTPRKQ15262 1439 aa21.56■■□□□ 1.04
POLR2J3-204ENST00000486319 DNMT1P26358 1616 aaKnown RBP21.55■■□□□ 1.04
POLR2J3-204ENST00000486319 FER1L4A9Z1Z3 1794 aa21.55■■□□□ 1.04
POLR2J3-204ENST00000486319 CEBPAP49715 358 aaPredicted RBP21.55■■□□□ 1.04
POLR2J3-204ENST00000486319 HFM1A2PYH4 1435 aa21.54■■□□□ 1.04
POLR2J3-204ENST00000486319 PLXNC1O60486 1568 aa21.54■■□□□ 1.04
POLR2J3-204ENST00000486319 KIF3BO15066 747 aa21.53■■□□□ 1.04
POLR2J3-204ENST00000486319 ADGBQ8N7X0 1667 aa21.52■■□□□ 1.04
POLR2J3-204ENST00000486319 GCC2Q8IWJ2 1684 aa21.52■■□□□ 1.04
POLR2J3-204ENST00000486319 ABCC5O15440 1437 aa21.51■■□□□ 1.03
POLR2J3-204ENST00000486319 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms