RNA–Protein interactions for RNA: ENST00000486198.1

NCOA1-209, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 2

Gene NCOA1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-209ENST00000486198 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
NCOA1-209ENST00000486198 ST18O60284 1047 aa11.74□□□□□ -0.53
NCOA1-209ENST00000486198 GTPBP6O43824 516 aaPredicted RBP11.7□□□□□ -0.54
NCOA1-209ENST00000486198 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
NCOA1-209ENST00000486198 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
NCOA1-209ENST00000486198 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
NCOA1-209ENST00000486198 KIF3CO14782 793 aa11.67□□□□□ -0.54
NCOA1-209ENST00000486198 TMC2Q8TDI7 906 aa11.67□□□□□ -0.54
NCOA1-209ENST00000486198 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
NCOA1-209ENST00000486198 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.54
NCOA1-209ENST00000486198 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
NCOA1-209ENST00000486198 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
NCOA1-209ENST00000486198 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
NCOA1-209ENST00000486198 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
NCOA1-209ENST00000486198 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
NCOA1-209ENST00000486198 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
NCOA1-209ENST00000486198 EMP3P54852 163 aa11.57□□□□□ -0.56
NCOA1-209ENST00000486198 FOXK1P85037 733 aa11.54□□□□□ -0.56
NCOA1-209ENST00000486198 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
NCOA1-209ENST00000486198 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
NCOA1-209ENST00000486198 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
NCOA1-209ENST00000486198 SLC34A2O95436 690 aa11.51□□□□□ -0.57
NCOA1-209ENST00000486198 PDE4AP27815 886 aa11.51□□□□□ -0.57
NCOA1-209ENST00000486198 GPR153Q6NV75 609 aa11.51□□□□□ -0.57
NCOA1-209ENST00000486198 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
NCOA1-209ENST00000486198 DSG2Q14126 1118 aa11.5□□□□□ -0.57
NCOA1-209ENST00000486198 FAM205CA6NFA0 338 aa11.48□□□□□ -0.57
NCOA1-209ENST00000486198 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
NCOA1-209ENST00000486198 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
NCOA1-209ENST00000486198 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
NCOA1-209ENST00000486198 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
NCOA1-209ENST00000486198 HS3ST6Q96QI5 342 aa11.46□□□□□ -0.57
NCOA1-209ENST00000486198 ERBB3P21860 1342 aa11.45□□□□□ -0.58
NCOA1-209ENST00000486198 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
NCOA1-209ENST00000486198 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
NCOA1-209ENST00000486198 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
NCOA1-209ENST00000486198 PTCD2Q8WV60 388 aaKnown RBP11.43□□□□□ -0.58
NCOA1-209ENST00000486198 KHSRPQ92945 711 aaKnown RBP eCLIP11.43□□□□□ -0.58
NCOA1-209ENST00000486198 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
NCOA1-209ENST00000486198 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
NCOA1-209ENST00000486198 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
NCOA1-209ENST00000486198 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
NCOA1-209ENST00000486198 MFSD10Q14728 455 aa11.4□□□□□ -0.58
NCOA1-209ENST00000486198 TBC1D12O60347 775 aa11.39□□□□□ -0.59
NCOA1-209ENST00000486198 NUDT7P0C024 238 aa11.39□□□□□ -0.59
NCOA1-209ENST00000486198 VARS2Q5ST30 1063 aaKnown RBP11.39□□□□□ -0.59
NCOA1-209ENST00000486198 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
NCOA1-209ENST00000486198 OXER1Q8TDS5 423 aa11.34□□□□□ -0.59
NCOA1-209ENST00000486198 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
NCOA1-209ENST00000486198 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
NCOA1-209ENST00000486198 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
NCOA1-209ENST00000486198 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
NCOA1-209ENST00000486198 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
NCOA1-209ENST00000486198 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
NCOA1-209ENST00000486198 KRTAP3-3Q9BYR6 98 aa11.29□□□□□ -0.6
NCOA1-209ENST00000486198 KRTAP3-2Q9BYR7 98 aa11.29□□□□□ -0.6
NCOA1-209ENST00000486198 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
NCOA1-209ENST00000486198 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
NCOA1-209ENST00000486198 CAMK2BQ13554 666 aa11.25□□□□□ -0.61
NCOA1-209ENST00000486198 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
NCOA1-209ENST00000486198 CCDC180Q9P1Z9 1646 aa11.24□□□□□ -0.61
NCOA1-209ENST00000486198 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
NCOA1-209ENST00000486198 EVI5O60447 810 aa11.22□□□□□ -0.61
NCOA1-209ENST00000486198 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
NCOA1-209ENST00000486198 PBX2P40425 430 aa11.2□□□□□ -0.62
NCOA1-209ENST00000486198 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
NCOA1-209ENST00000486198 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
NCOA1-209ENST00000486198 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
NCOA1-209ENST00000486198 E2F4Q16254 413 aa11.16□□□□□ -0.62
NCOA1-209ENST00000486198 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
NCOA1-209ENST00000486198 DPYSL4O14531 572 aa11.14□□□□□ -0.63
NCOA1-209ENST00000486198 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
NCOA1-209ENST00000486198 FOSBP53539 338 aa11.13□□□□□ -0.63
NCOA1-209ENST00000486198 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
NCOA1-209ENST00000486198 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
NCOA1-209ENST00000486198 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
NCOA1-209ENST00000486198 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
NCOA1-209ENST00000486198 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
NCOA1-209ENST00000486198 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
NCOA1-209ENST00000486198 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
NCOA1-209ENST00000486198 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
NCOA1-209ENST00000486198 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
NCOA1-209ENST00000486198 SPDYE16A6NNV3 312 aaPredicted RBP11.07□□□□□ -0.64
NCOA1-209ENST00000486198 PTGER2P43116 358 aa11.07□□□□□ -0.64
NCOA1-209ENST00000486198 PHF14O94880 888 aa11.06□□□□□ -0.64
NCOA1-209ENST00000486198 PSEN2P49810 448 aa11.06□□□□□ -0.64
NCOA1-209ENST00000486198 PDIA6Q15084 440 aa11.06□□□□□ -0.64
NCOA1-209ENST00000486198 KCNK17Q96T54 332 aa11.06□□□□□ -0.64
NCOA1-209ENST00000486198 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
NCOA1-209ENST00000486198 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
NCOA1-209ENST00000486198 TK2O00142 265 aa11.03□□□□□ -0.64
NCOA1-209ENST00000486198 PTPREP23469 700 aa11.03□□□□□ -0.64
NCOA1-209ENST00000486198 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
NCOA1-209ENST00000486198 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
NCOA1-209ENST00000486198 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
NCOA1-209ENST00000486198 ADGRD1Q6QNK2 874 aa11.02□□□□□ -0.65
NCOA1-209ENST00000486198 EPAS1Q99814 870 aa11.02□□□□□ -0.65
NCOA1-209ENST00000486198 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
NCOA1-209ENST00000486198 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
NCOA1-209ENST00000486198 DDX12PQ92771 950 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms