RNA–Protein interactions for RNA: ENST00000485583.1

LRCH4-206, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-206ENST00000485583 MAGI2Q86UL8 1455 aa29.63■■■□□ 2.33
LRCH4-206ENST00000485583 YEATS2Q9ULM3 1422 aa29.62■■■□□ 2.33
LRCH4-206ENST00000485583 POGZQ7Z3K3 1410 aa29.62■■■□□ 2.33
LRCH4-206ENST00000485583 EFCAB2Q5VUJ9 269 aa29.6■■■□□ 2.33
LRCH4-206ENST00000485583 SIGLEC1Q9BZZ2 1709 aa29.59■■■□□ 2.33
LRCH4-206ENST00000485583 CLIP1P30622 1438 aa29.57■■■□□ 2.32
LRCH4-206ENST00000485583 ILDR1Q86SU0 546 aaPredicted RBP29.57■■■□□ 2.32
LRCH4-206ENST00000485583 RIMS1Q86UR5 1692 aaKnown RBP29.56■■■□□ 2.32
LRCH4-206ENST00000485583 PCF11O94913 1555 aaKnown RBP29.55■■■□□ 2.32
LRCH4-206ENST00000485583 CASKIN1Q8WXD9 1431 aa29.54■■■□□ 2.32
LRCH4-206ENST00000485583 ARHGAP5Q13017 1502 aa29.51■■■□□ 2.32
LRCH4-206ENST00000485583 CCDC18Q5T9S5 1454 aa29.5■■■□□ 2.31
LRCH4-206ENST00000485583 CDC42BPBQ9Y5S2 1711 aa29.47■■■□□ 2.31
LRCH4-206ENST00000485583 ATP10AO60312 1499 aa29.47■■■□□ 2.31
LRCH4-206ENST00000485583 ZNF518AQ6AHZ1 1483 aa29.46■■■□□ 2.31
LRCH4-206ENST00000485583 C9orf84Q5VXU9 1444 aa29.44■■■□□ 2.3
LRCH4-206ENST00000485583 KDM5CP41229 1560 aa29.43■■■□□ 2.3
LRCH4-206ENST00000485583 LMTK3Q96Q04 1460 aa29.43■■■□□ 2.3
LRCH4-206ENST00000485583 FYCO1Q9BQS8 1478 aa29.42■■■□□ 2.3
LRCH4-206ENST00000485583 MLECQ14165 292 aa29.42■■■□□ 2.3
LRCH4-206ENST00000485583 PREX2Q70Z35 1606 aa29.42■■■□□ 2.3
LRCH4-206ENST00000485583 AFAP1Q8N556 730 aa29.41■■■□□ 2.3
LRCH4-206ENST00000485583 FER1L4A9Z1Z3 1794 aa29.41■■■□□ 2.3
LRCH4-206ENST00000485583 ARHGEF12Q9NZN5 1544 aa29.37■■■□□ 2.29
LRCH4-206ENST00000485583 PLPPR3Q6T4P5 718 aa29.36■■■□□ 2.29
LRCH4-206ENST00000485583 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
LRCH4-206ENST00000485583 ABCC1P33527 1531 aa29.34■■■□□ 2.29
LRCH4-206ENST00000485583 DIP2CQ9Y2E4 1556 aa29.32■■■□□ 2.28
LRCH4-206ENST00000485583 MLH3Q9UHC1 1453 aa29.31■■■□□ 2.28
LRCH4-206ENST00000485583 ITSN2Q9NZM3 1697 aa29.31■■■□□ 2.28
LRCH4-206ENST00000485583 TRAPPC8Q9Y2L5 1435 aa29.3■■■□□ 2.28
LRCH4-206ENST00000485583 MYT1LQ9UL68 1186 aa29.3■■■□□ 2.28
LRCH4-206ENST00000485583 ABCA6Q8N139 1617 aa29.28■■■□□ 2.28
LRCH4-206ENST00000485583 REREQ9P2R6 1566 aa29.28■■■□□ 2.28
LRCH4-206ENST00000485583 HSPA2P54652 639 aa29.26■■■□□ 2.27
LRCH4-206ENST00000485583 GPATCH8Q9UKJ3 1502 aaKnown RBP29.22■■■□□ 2.27
LRCH4-206ENST00000485583 KIDINS220Q9ULH0 1771 aa29.21■■■□□ 2.27
LRCH4-206ENST00000485583 SAMD9LQ8IVG5 1584 aa29.2■■■□□ 2.26
LRCH4-206ENST00000485583 CEBPAP49715 358 aaPredicted RBP29.19■■■□□ 2.26
LRCH4-206ENST00000485583 AGLP35573 1532 aa29.19■■■□□ 2.26
LRCH4-206ENST00000485583 ZNF777Q9ULD5 760 aaPredicted RBP29.18■■■□□ 2.26
LRCH4-206ENST00000485583 PREX1Q8TCU6 1659 aa29.16■■■□□ 2.26
LRCH4-206ENST00000485583 FBXO41Q8TF61 875 aa29.15■■■□□ 2.26
LRCH4-206ENST00000485583 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
LRCH4-206ENST00000485583 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
LRCH4-206ENST00000485583 SETD1BQ9UPS6 1966 aaKnown RBP29.11■■■□□ 2.25
LRCH4-206ENST00000485583 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
LRCH4-206ENST00000485583 HNRNPMP52272 730 aaKnown RBP eCLIP29.1■■■□□ 2.25
LRCH4-206ENST00000485583 CFDP1Q9UEE9 299 aaPredicted RBP29.1■■■□□ 2.25
LRCH4-206ENST00000485583 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
LRCH4-206ENST00000485583 CEP162Q5TB80 1403 aa29.08■■■□□ 2.25
LRCH4-206ENST00000485583 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
LRCH4-206ENST00000485583 C3P01024 1663 aa29.08■■■□□ 2.25
LRCH4-206ENST00000485583 SPAG9O60271 1321 aaKnown RBP29.07■■■□□ 2.24
LRCH4-206ENST00000485583 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
LRCH4-206ENST00000485583 EHBP1L1Q8N3D4 1523 aa29.04■■■□□ 2.24
LRCH4-206ENST00000485583 UHRF1BP1Q6BDS2 1440 aa29.03■■■□□ 2.24
LRCH4-206ENST00000485583 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
LRCH4-206ENST00000485583 TIAM1Q13009 1591 aa29.02■■■□□ 2.24
LRCH4-206ENST00000485583 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.24
LRCH4-206ENST00000485583 CNTLNQ9NXG0 1405 aa29■■■□□ 2.23
LRCH4-206ENST00000485583 SUPT6HQ7KZ85 1726 aaKnown RBP28.99■■■□□ 2.23
LRCH4-206ENST00000485583 STRCQ7RTU9 1775 aa28.97■■■□□ 2.23
LRCH4-206ENST00000485583 ZNF644Q9H582 1327 aaPredicted RBP28.95■■■□□ 2.23
LRCH4-206ENST00000485583 PLXNC1O60486 1568 aa28.95■■■□□ 2.22
LRCH4-206ENST00000485583 MROH2AA6NES4 1674 aa28.93■■■□□ 2.22
LRCH4-206ENST00000485583 A2MP01023 1474 aa28.93■■■□□ 2.22
LRCH4-206ENST00000485583 MBD5Q9P267 1494 aa28.92■■■□□ 2.22
LRCH4-206ENST00000485583 CERKQ8TCT0 537 aa28.89■■■□□ 2.22
LRCH4-206ENST00000485583 DMRT2Q9Y5R5 561 aa28.89■■■□□ 2.22
LRCH4-206ENST00000485583 ADGBQ8N7X0 1667 aa28.88■■■□□ 2.21
LRCH4-206ENST00000485583 ZMYM3Q14202 1370 aa28.88■■■□□ 2.21
LRCH4-206ENST00000485583 NPATQ14207 1427 aa28.86■■■□□ 2.21
LRCH4-206ENST00000485583 NCOA2Q15596 1464 aa28.86■■■□□ 2.21
LRCH4-206ENST00000485583 CLTCQ00610 1675 aaKnown RBP28.85■■■□□ 2.21
LRCH4-206ENST00000485583 RTEL1-TNFRSF6BF6WH68 1400 aa28.85■■■□□ 2.21
LRCH4-206ENST00000485583 LOC105371045A0A1W2PR82 267 aa28.82■■■□□ 2.2
LRCH4-206ENST00000485583 GGT6Q6P531 493 aa28.81■■■□□ 2.2
LRCH4-206ENST00000485583 PTPRTO14522 1441 aa28.79■■■□□ 2.2
LRCH4-206ENST00000485583 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
LRCH4-206ENST00000485583 CAMSAP2Q08AD1 1489 aa28.78■■■□□ 2.2
LRCH4-206ENST00000485583 PPP6R1Q9UPN7 881 aa28.78■■■□□ 2.2
LRCH4-206ENST00000485583 CCDC141Q6ZP82 1450 aa28.77■■■□□ 2.2
LRCH4-206ENST00000485583 DHX29Q7Z478 1369 aaKnown RBP28.76■■■□□ 2.2
LRCH4-206ENST00000485583 NCOA1Q15788 1441 aa28.76■■■□□ 2.19
LRCH4-206ENST00000485583 RSPH4AQ5TD94 716 aa28.74■■■□□ 2.19
LRCH4-206ENST00000485583 PTPRKQ15262 1439 aa28.74■■■□□ 2.19
LRCH4-206ENST00000485583 CAMSAP1Q5T5Y3 1602 aa28.72■■■□□ 2.19
LRCH4-206ENST00000485583 LRRC9Q6ZRR7 1453 aa28.72■■■□□ 2.19
LRCH4-206ENST00000485583 MYO3AQ8NEV4 1616 aa28.71■■■□□ 2.19
LRCH4-206ENST00000485583 ZNF142P52746 1687 aaPredicted RBP28.7■■■□□ 2.18
LRCH4-206ENST00000485583 ARHGEF5Q12774 1597 aa28.69■■■□□ 2.18
LRCH4-206ENST00000485583 MAP3K1Q13233 1512 aa28.66■■■□□ 2.18
LRCH4-206ENST00000485583 KIF3BO15066 747 aa28.65■■■□□ 2.18
LRCH4-206ENST00000485583 CEP170BQ9Y4F5 1589 aaPredicted RBP28.65■■■□□ 2.18
LRCH4-206ENST00000485583 LTBP4Q8N2S1 1624 aa28.63■■■□□ 2.17
LRCH4-206ENST00000485583 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
LRCH4-206ENST00000485583 TSPY4P0CV99 314 aa28.62■■■□□ 2.17
LRCH4-206ENST00000485583 TSPY10P0CW01 314 aa28.62■■■□□ 2.17
LRCH4-206ENST00000485583 PLA2R1Q13018 1463 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms