RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CDC42BPBQ9Y5S2 1711 aa26.99■■□□□ 1.91
CHMP3-207ENST00000485465 ARHGAP5Q13017 1502 aa26.99■■□□□ 1.91
CHMP3-207ENST00000485465 FGD6Q6ZV73 1430 aa26.99■■□□□ 1.91
CHMP3-207ENST00000485465 EFCAB2Q5VUJ9 269 aa26.98■■□□□ 1.91
CHMP3-207ENST00000485465 FANCAO15360 1455 aa26.94■■□□□ 1.9
CHMP3-207ENST00000485465 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
CHMP3-207ENST00000485465 PPRC1Q5VV67 1664 aaKnown RBP26.92■■□□□ 1.9
CHMP3-207ENST00000485465 TSPOAP1O95153 1857 aa26.92■■□□□ 1.9
CHMP3-207ENST00000485465 ZNF644Q9H582 1327 aaPredicted RBP26.91■■□□□ 1.9
CHMP3-207ENST00000485465 RRBP1Q9P2E9 1410 aaKnown RBP26.91■■□□□ 1.9
CHMP3-207ENST00000485465 TEX14Q8IWB6 1497 aa26.91■■□□□ 1.9
CHMP3-207ENST00000485465 PTPN23Q9H3S7 1636 aa26.9■■□□□ 1.9
CHMP3-207ENST00000485465 NEO1Q92859 1461 aa26.89■■□□□ 1.9
CHMP3-207ENST00000485465 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
CHMP3-207ENST00000485465 TCOF1Q13428 1488 aaKnown RBP26.88■■□□□ 1.89
CHMP3-207ENST00000485465 AKNAQ7Z591 1439 aa26.88■■□□□ 1.89
CHMP3-207ENST00000485465 SAMD9LQ8IVG5 1584 aa26.88■■□□□ 1.89
CHMP3-207ENST00000485465 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
CHMP3-207ENST00000485465 FAM50AQ14320 339 aaKnown RBP26.86■■□□□ 1.89
CHMP3-207ENST00000485465 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
CHMP3-207ENST00000485465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.83■■□□□ 1.88
CHMP3-207ENST00000485465 KIAA1107Q9UPP5 1409 aa26.82■■□□□ 1.88
CHMP3-207ENST00000485465 ADGRL1O94910 1474 aa26.81■■□□□ 1.88
CHMP3-207ENST00000485465 ABCC1P33527 1531 aa26.81■■□□□ 1.88
CHMP3-207ENST00000485465 HNRNPMP52272 730 aaKnown RBP eCLIP26.8■■□□□ 1.88
CHMP3-207ENST00000485465 SCAPERQ9BY12 1400 aa26.79■■□□□ 1.88
CHMP3-207ENST00000485465 ARHGEF12Q9NZN5 1544 aa26.79■■□□□ 1.88
CHMP3-207ENST00000485465 SYCP2Q9BX26 1530 aa26.78■■□□□ 1.88
CHMP3-207ENST00000485465 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
CHMP3-207ENST00000485465 RSPH4AQ5TD94 716 aa26.74■■□□□ 1.87
CHMP3-207ENST00000485465 TRIM26Q12899 539 aaPredicted RBP26.73■■□□□ 1.87
CHMP3-207ENST00000485465 ARHGEF5Q12774 1597 aa26.72■■□□□ 1.87
CHMP3-207ENST00000485465 DENND4BO75064 1496 aaPredicted RBP26.72■■□□□ 1.87
CHMP3-207ENST00000485465 TRAPPC8Q9Y2L5 1435 aa26.72■■□□□ 1.87
CHMP3-207ENST00000485465 ABCC5O15440 1437 aa26.7■■□□□ 1.86
CHMP3-207ENST00000485465 CCDC141Q6ZP82 1450 aa26.69■■□□□ 1.86
CHMP3-207ENST00000485465 DNMT1P26358 1616 aaKnown RBP26.69■■□□□ 1.86
CHMP3-207ENST00000485465 DAPK1P53355 1430 aa26.69■■□□□ 1.86
CHMP3-207ENST00000485465 POGZQ7Z3K3 1410 aa26.69■■□□□ 1.86
CHMP3-207ENST00000485465 AFAP1Q8N556 730 aa26.69■■□□□ 1.86
CHMP3-207ENST00000485465 RAPGEF3O95398 923 aa26.68■■□□□ 1.86
CHMP3-207ENST00000485465 ITGAEP38570 1179 aa26.68■■□□□ 1.86
CHMP3-207ENST00000485465 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
CHMP3-207ENST00000485465 ZNF518AQ6AHZ1 1483 aa26.66■■□□□ 1.86
CHMP3-207ENST00000485465 TSPY4P0CV99 314 aa26.65■■□□□ 1.86
CHMP3-207ENST00000485465 TSPY10P0CW01 314 aa26.65■■□□□ 1.86
CHMP3-207ENST00000485465 PTPRKQ15262 1439 aa26.63■■□□□ 1.85
CHMP3-207ENST00000485465 RICTORQ6R327 1708 aa26.62■■□□□ 1.85
CHMP3-207ENST00000485465 FRMPD1Q5SYB0 1578 aa26.61■■□□□ 1.85
CHMP3-207ENST00000485465 SHANK2Q9UPX8 1470 aa26.61■■□□□ 1.85
CHMP3-207ENST00000485465 KDM5CP41229 1560 aa26.6■■□□□ 1.85
CHMP3-207ENST00000485465 SPAG9O60271 1321 aaKnown RBP26.6■■□□□ 1.85
CHMP3-207ENST00000485465 CROCC2H7BZ55 1655 aa26.6■■□□□ 1.85
CHMP3-207ENST00000485465 C9orf84Q5VXU9 1444 aa26.59■■□□□ 1.85
CHMP3-207ENST00000485465 KDM6BO15054 1643 aa26.59■■□□□ 1.85
CHMP3-207ENST00000485465 CHIC2Q9UKJ5 165 aa26.58■■□□□ 1.85
CHMP3-207ENST00000485465 MAST1Q9Y2H9 1570 aa26.57■■□□□ 1.84
CHMP3-207ENST00000485465 RTEL1-TNFRSF6BF6WH68 1400 aa26.56■■□□□ 1.84
CHMP3-207ENST00000485465 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
CHMP3-207ENST00000485465 ZMYM4Q5VZL5 1548 aa26.55■■□□□ 1.84
CHMP3-207ENST00000485465 MYT1LQ9UL68 1186 aa26.53■■□□□ 1.84
CHMP3-207ENST00000485465 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
CHMP3-207ENST00000485465 INO80Q9ULG1 1556 aaPredicted RBP26.52■■□□□ 1.84
CHMP3-207ENST00000485465 HECW2Q9P2P5 1572 aa26.51■■□□□ 1.83
CHMP3-207ENST00000485465 ATP7AQ04656 1500 aa26.51■■□□□ 1.83
CHMP3-207ENST00000485465 ADGRL2O95490 1459 aa26.51■■□□□ 1.83
CHMP3-207ENST00000485465 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
CHMP3-207ENST00000485465 MAGI2Q86UL8 1455 aa26.5■■□□□ 1.83
CHMP3-207ENST00000485465 ANKRD30AQ9BXX3 1397 aa26.5■■□□□ 1.83
CHMP3-207ENST00000485465 NCOA1Q15788 1441 aa26.49■■□□□ 1.83
CHMP3-207ENST00000485465 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
CHMP3-207ENST00000485465 ADGBQ8N7X0 1667 aa26.48■■□□□ 1.83
CHMP3-207ENST00000485465 PCGF6Q9BYE7 350 aa26.47■■□□□ 1.83
CHMP3-207ENST00000485465 RRP7BPQ9NSQ0 103 aa26.46■■□□□ 1.83
CHMP3-207ENST00000485465 PLXNC1O60486 1568 aa26.45■■□□□ 1.82
CHMP3-207ENST00000485465 YEATS2Q9ULM3 1422 aa26.44■■□□□ 1.82
CHMP3-207ENST00000485465 KIF15Q9NS87 1388 aa26.43■■□□□ 1.82
CHMP3-207ENST00000485465 ABCA6Q8N139 1617 aa26.4■■□□□ 1.82
CHMP3-207ENST00000485465 DIP2CQ9Y2E4 1556 aa26.4■■□□□ 1.82
CHMP3-207ENST00000485465 HFM1A2PYH4 1435 aa26.39■■□□□ 1.82
CHMP3-207ENST00000485465 NAIPQ13075 1403 aa26.39■■□□□ 1.81
CHMP3-207ENST00000485465 ARHGEF40Q8TER5 1519 aa26.38■■□□□ 1.81
CHMP3-207ENST00000485465 ATP10AO60312 1499 aa26.37■■□□□ 1.81
CHMP3-207ENST00000485465 DUOX2Q9NRD8 1548 aa26.37■■□□□ 1.81
CHMP3-207ENST00000485465 A2MP01023 1474 aa26.36■■□□□ 1.81
CHMP3-207ENST00000485465 DHX29Q7Z478 1369 aaKnown RBP26.35■■□□□ 1.81
CHMP3-207ENST00000485465 SETD5Q9C0A6 1442 aa26.33■■□□□ 1.81
CHMP3-207ENST00000485465 GCC2Q8IWJ2 1684 aa26.33■■□□□ 1.81
CHMP3-207ENST00000485465 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
CHMP3-207ENST00000485465 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
CHMP3-207ENST00000485465 REREQ9P2R6 1566 aa26.29■■□□□ 1.8
CHMP3-207ENST00000485465 RAB3GAP2Q9H2M9 1393 aa26.25■■□□□ 1.79
CHMP3-207ENST00000485465 EIF2AK4Q9P2K8 1649 aaKnown RBP26.22■■□□□ 1.79
CHMP3-207ENST00000485465 KIF3BO15066 747 aa26.22■■□□□ 1.79
CHMP3-207ENST00000485465 AGLP35573 1532 aa26.22■■□□□ 1.79
CHMP3-207ENST00000485465 HRCP23327 699 aa26.21■■□□□ 1.79
CHMP3-207ENST00000485465 SIGLEC1Q9BZZ2 1709 aa26.19■■□□□ 1.78
CHMP3-207ENST00000485465 BCORL1Q5H9F3 1711 aa26.17■■□□□ 1.78
CHMP3-207ENST00000485465 ARID4BQ4LE39 1312 aaPredicted RBP26.16■■□□□ 1.78
CHMP3-207ENST00000485465 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms