RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
SFPQ-209ENST00000485454 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
SFPQ-209ENST00000485454 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
SFPQ-209ENST00000485454 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
SFPQ-209ENST00000485454 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
SFPQ-209ENST00000485454 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
SFPQ-209ENST00000485454 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
SFPQ-209ENST00000485454 RIMBP2O15034 1052 aa9.32□□□□□ -0.92
SFPQ-209ENST00000485454 PPP1R37O75864 691 aa9.32□□□□□ -0.92
SFPQ-209ENST00000485454 TMEM92Q6UXU6 159 aa9.32□□□□□ -0.92
SFPQ-209ENST00000485454 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
SFPQ-209ENST00000485454 GTPBP6O43824 516 aaPredicted RBP9.3□□□□□ -0.92
SFPQ-209ENST00000485454 HOXB1P14653 301 aaPredicted RBP9.3□□□□□ -0.92
SFPQ-209ENST00000485454 POTEB3A0JP26 581 aa9.29□□□□□ -0.92
SFPQ-209ENST00000485454 POTEBQ6S5H4 581 aa9.29□□□□□ -0.92
SFPQ-209ENST00000485454 SPNS2Q8IVW8 549 aa9.28□□□□□ -0.92
SFPQ-209ENST00000485454 MMRN1Q13201 1228 aa9.26□□□□□ -0.93
SFPQ-209ENST00000485454 ERBB3P21860 1342 aa9.26□□□□□ -0.93
SFPQ-209ENST00000485454 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
SFPQ-209ENST00000485454 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
SFPQ-209ENST00000485454 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-209ENST00000485454 ZSWIM6Q9HCJ5 1215 aa9.24□□□□□ -0.93
SFPQ-209ENST00000485454 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
SFPQ-209ENST00000485454 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
SFPQ-209ENST00000485454 GPR153Q6NV75 609 aa9.19□□□□□ -0.94
SFPQ-209ENST00000485454 C2orf72A6NCS6 295 aa9.18□□□□□ -0.94
SFPQ-209ENST00000485454 KIF3CO14782 793 aa9.18□□□□□ -0.94
SFPQ-209ENST00000485454 TMC2Q8TDI7 906 aa9.18□□□□□ -0.94
SFPQ-209ENST00000485454 ARSIQ5FYB1 569 aa9.16□□□□□ -0.94
SFPQ-209ENST00000485454 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
SFPQ-209ENST00000485454 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
SFPQ-209ENST00000485454 GPHNQ9NQX3 736 aaPredicted RBP9.13□□□□□ -0.95
SFPQ-209ENST00000485454 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
SFPQ-209ENST00000485454 KHSRPQ92945 711 aaKnown RBP eCLIP9.12□□□□□ -0.95
SFPQ-209ENST00000485454 CRISPLD2Q9H0B8 497 aa9.11□□□□□ -0.95
SFPQ-209ENST00000485454 PDE4AP27815 886 aa9.1□□□□□ -0.95
SFPQ-209ENST00000485454 FOXK1P85037 733 aa9.1□□□□□ -0.95
SFPQ-209ENST00000485454 ZNF316A6NFI3 1004 aaPredicted RBP9.09□□□□□ -0.95
SFPQ-209ENST00000485454 NCKAP5LQ9HCH0 1330 aa9.08□□□□□ -0.96
SFPQ-209ENST00000485454 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
SFPQ-209ENST00000485454 NUDT7P0C024 238 aa9.07□□□□□ -0.96
SFPQ-209ENST00000485454 DSG2Q14126 1118 aa9.07□□□□□ -0.96
SFPQ-209ENST00000485454 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
SFPQ-209ENST00000485454 SLC34A2O95436 690 aa9.06□□□□□ -0.96
SFPQ-209ENST00000485454 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
SFPQ-209ENST00000485454 PCDHGA4Q9Y5G9 962 aa9.05□□□□□ -0.96
SFPQ-209ENST00000485454 PPP1R15BQ5SWA1 713 aa9.04□□□□□ -0.96
SFPQ-209ENST00000485454 MFSD10Q14728 455 aa9.02□□□□□ -0.97
SFPQ-209ENST00000485454 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
SFPQ-209ENST00000485454 DDX27Q96GQ7 796 aaKnown RBP9.02□□□□□ -0.97
SFPQ-209ENST00000485454 LHX6Q9UPM6 363 aa9.02□□□□□ -0.97
SFPQ-209ENST00000485454 MYT1LQ9UL68 1186 aa9.01□□□□□ -0.97
SFPQ-209ENST00000485454 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
SFPQ-209ENST00000485454 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
SFPQ-209ENST00000485454 PTGER2P43116 358 aa8.98□□□□□ -0.97
SFPQ-209ENST00000485454 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
SFPQ-209ENST00000485454 LSM11P83369 360 aaKnown RBP eCLIP8.97□□□□□ -0.972e-7■■□□□ 12.2
SFPQ-209ENST00000485454 TBC1D12O60347 775 aa8.96□□□□□ -0.98
SFPQ-209ENST00000485454 PBX2P40425 430 aa8.96□□□□□ -0.98
SFPQ-209ENST00000485454 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
SFPQ-209ENST00000485454 PSDA5PKW4 1024 aaPredicted RBP8.94□□□□□ -0.98
SFPQ-209ENST00000485454 OXER1Q8TDS5 423 aa8.94□□□□□ -0.98
SFPQ-209ENST00000485454 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
SFPQ-209ENST00000485454 AXIN2Q9Y2T1 843 aa8.94□□□□□ -0.98
SFPQ-209ENST00000485454 POTEEQ6S8J3 1075 aa8.92□□□□□ -0.98
SFPQ-209ENST00000485454 WDR70Q9NW82 654 aa8.92□□□□□ -0.98
SFPQ-209ENST00000485454 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
SFPQ-209ENST00000485454 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.98
SFPQ-209ENST00000485454 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
SFPQ-209ENST00000485454 ARHGAP33O14559 1287 aa8.88□□□□□ -0.99
SFPQ-209ENST00000485454 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
SFPQ-209ENST00000485454 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
SFPQ-209ENST00000485454 HAP1P54257 671 aaPredicted RBP8.86□□□□□ -0.99
SFPQ-209ENST00000485454 E2F4Q16254 413 aa8.86□□□□□ -0.99
SFPQ-209ENST00000485454 ADGRD1Q6QNK2 874 aa8.85□□□□□ -0.99
SFPQ-209ENST00000485454 EVI5O60447 810 aa8.84□□□□□ -0.99
SFPQ-209ENST00000485454 PSEN2P49810 448 aa8.83□□□□□ -1
SFPQ-209ENST00000485454 DPYSL4O14531 572 aa8.82□□□□□ -1
SFPQ-209ENST00000485454 KCNH8Q96L42 1107 aa8.82□□□□□ -1
SFPQ-209ENST00000485454 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
SFPQ-209ENST00000485454 DMRTA1Q5VZB9 504 aa8.81□□□□□ -1
SFPQ-209ENST00000485454 TK2O00142 265 aa8.8□□□□□ -1
SFPQ-209ENST00000485454 ZNF454Q8N9F8 522 aa8.79□□□□□ -1
SFPQ-209ENST00000485454 KCNK17Q96T54 332 aa8.79□□□□□ -1
SFPQ-209ENST00000485454 ARIH1Q9Y4X5 557 aaPredicted RBP8.79□□□□□ -1
SFPQ-209ENST00000485454 HRO43593 1189 aa8.76□□□□□ -1.01
SFPQ-209ENST00000485454 FOSBP53539 338 aa8.76□□□□□ -1.01
SFPQ-209ENST00000485454 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
SFPQ-209ENST00000485454 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
SFPQ-209ENST00000485454 SPDYE16A6NNV3 312 aaPredicted RBP8.75□□□□□ -1.01
SFPQ-209ENST00000485454 PDIA6Q15084 440 aa8.75□□□□□ -1.01
SFPQ-209ENST00000485454 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
SFPQ-209ENST00000485454 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
SFPQ-209ENST00000485454 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
SFPQ-209ENST00000485454 PHF14O94880 888 aa8.72□□□□□ -1.01
SFPQ-209ENST00000485454 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
SFPQ-209ENST00000485454 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
SFPQ-209ENST00000485454 ARHGEF1Q92888 912 aaKnown RBP8.72□□□□□ -1.01
SFPQ-209ENST00000485454 PTPREP23469 700 aa8.71□□□□□ -1.02
SFPQ-209ENST00000485454 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms