RNA–Protein interactions for RNA: ENST00000485439.5

RPL35A-208, Transcript of ribosomal protein L35a, humanhuman

TSL 2

Gene RPL35A, Length 677 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-208ENST00000485439 PLCH2O75038 1416 aa12.7□□□□□ -0.38
RPL35A-208ENST00000485439 ZFYVE16Q7Z3T8 1539 aa12.68□□□□□ -0.38
RPL35A-208ENST00000485439 CDC42BPAQ5VT25 1732 aa12.68□□□□□ -0.38
RPL35A-208ENST00000485439 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
RPL35A-208ENST00000485439 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
RPL35A-208ENST00000485439 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
RPL35A-208ENST00000485439 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
RPL35A-208ENST00000485439 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
RPL35A-208ENST00000485439 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
RPL35A-208ENST00000485439 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
RPL35A-208ENST00000485439 KDM5CP41229 1560 aa12.64□□□□□ -0.39
RPL35A-208ENST00000485439 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
RPL35A-208ENST00000485439 RIMS1Q86UR5 1692 aaKnown RBP12.63□□□□□ -0.39
RPL35A-208ENST00000485439 ABCC1P33527 1531 aa12.62□□□□□ -0.39
RPL35A-208ENST00000485439 FER1L4A9Z1Z3 1794 aa12.62□□□□□ -0.39
RPL35A-208ENST00000485439 ZNF518AQ6AHZ1 1483 aa12.62□□□□□ -0.39
RPL35A-208ENST00000485439 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
RPL35A-208ENST00000485439 EFCAB2Q5VUJ9 269 aa12.61□□□□□ -0.39
RPL35A-208ENST00000485439 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
RPL35A-208ENST00000485439 PTPRMP28827 1452 aa12.6□□□□□ -0.39
RPL35A-208ENST00000485439 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
RPL35A-208ENST00000485439 C9orf84Q5VXU9 1444 aa12.58□□□□□ -0.4
RPL35A-208ENST00000485439 ARID4BQ4LE39 1312 aaPredicted RBP12.58□□□□□ -0.4
RPL35A-208ENST00000485439 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
RPL35A-208ENST00000485439 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
RPL35A-208ENST00000485439 DIP2CQ9Y2E4 1556 aa12.57□□□□□ -0.4
RPL35A-208ENST00000485439 REREQ9P2R6 1566 aa12.56□□□□□ -0.4
RPL35A-208ENST00000485439 ATP10AO60312 1499 aa12.55□□□□□ -0.4
RPL35A-208ENST00000485439 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
RPL35A-208ENST00000485439 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
RPL35A-208ENST00000485439 ARHGEF12Q9NZN5 1544 aa12.54□□□□□ -0.4
RPL35A-208ENST00000485439 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
RPL35A-208ENST00000485439 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
RPL35A-208ENST00000485439 TIAM1Q13009 1591 aa12.53□□□□□ -0.4
RPL35A-208ENST00000485439 MTUS2Q5JR59 1369 aa12.53□□□□□ -0.4
RPL35A-208ENST00000485439 TRAPPC8Q9Y2L5 1435 aa12.52□□□□□ -0.41
RPL35A-208ENST00000485439 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
RPL35A-208ENST00000485439 PLEKHH2Q8IVE3 1493 aa12.5□□□□□ -0.41
RPL35A-208ENST00000485439 INO80Q9ULG1 1556 aaPredicted RBP12.5□□□□□ -0.41
RPL35A-208ENST00000485439 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
RPL35A-208ENST00000485439 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
RPL35A-208ENST00000485439 AGLP35573 1532 aa12.48□□□□□ -0.41
RPL35A-208ENST00000485439 LMTK3Q96Q04 1460 aa12.48□□□□□ -0.41
RPL35A-208ENST00000485439 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
RPL35A-208ENST00000485439 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
RPL35A-208ENST00000485439 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
RPL35A-208ENST00000485439 KIAA1107Q9UPP5 1409 aa12.47□□□□□ -0.41
RPL35A-208ENST00000485439 MLECQ14165 292 aa12.46□□□□□ -0.41
RPL35A-208ENST00000485439 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
RPL35A-208ENST00000485439 C3P01024 1663 aa12.45□□□□□ -0.42
RPL35A-208ENST00000485439 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
RPL35A-208ENST00000485439 PLXNC1O60486 1568 aa12.45□□□□□ -0.42
RPL35A-208ENST00000485439 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
RPL35A-208ENST00000485439 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
RPL35A-208ENST00000485439 SETD1BQ9UPS6 1966 aaKnown RBP12.44□□□□□ -0.42
RPL35A-208ENST00000485439 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
RPL35A-208ENST00000485439 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
RPL35A-208ENST00000485439 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
RPL35A-208ENST00000485439 SPAG9O60271 1321 aaKnown RBP12.41□□□□□ -0.42
RPL35A-208ENST00000485439 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
RPL35A-208ENST00000485439 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.42
RPL35A-208ENST00000485439 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
RPL35A-208ENST00000485439 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
RPL35A-208ENST00000485439 MBD5Q9P267 1494 aa12.4□□□□□ -0.43
RPL35A-208ENST00000485439 HNRNPMP52272 730 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPL35A-208ENST00000485439 A2MP01023 1474 aa12.39□□□□□ -0.43
RPL35A-208ENST00000485439 CCDC141Q6ZP82 1450 aa12.39□□□□□ -0.43
RPL35A-208ENST00000485439 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
RPL35A-208ENST00000485439 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
RPL35A-208ENST00000485439 CNTLNQ9NXG0 1405 aa12.38□□□□□ -0.43
RPL35A-208ENST00000485439 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
RPL35A-208ENST00000485439 RTEL1-TNFRSF6BF6WH68 1400 aa12.36□□□□□ -0.43
RPL35A-208ENST00000485439 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
RPL35A-208ENST00000485439 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
RPL35A-208ENST00000485439 CROCC2H7BZ55 1655 aa12.33□□□□□ -0.44
RPL35A-208ENST00000485439 CEBPAP49715 358 aaPredicted RBP12.33□□□□□ -0.44
RPL35A-208ENST00000485439 HSPA2P54652 639 aa12.33□□□□□ -0.44
RPL35A-208ENST00000485439 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
RPL35A-208ENST00000485439 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.44
RPL35A-208ENST00000485439 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.44
RPL35A-208ENST00000485439 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
RPL35A-208ENST00000485439 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
RPL35A-208ENST00000485439 NPATQ14207 1427 aa12.31□□□□□ -0.44
RPL35A-208ENST00000485439 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
RPL35A-208ENST00000485439 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
RPL35A-208ENST00000485439 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
RPL35A-208ENST00000485439 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
RPL35A-208ENST00000485439 EIF2AK4Q9P2K8 1649 aaKnown RBP12.29□□□□□ -0.44
RPL35A-208ENST00000485439 KDM5DQ9BY66 1539 aa12.28□□□□□ -0.44
RPL35A-208ENST00000485439 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
RPL35A-208ENST00000485439 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
RPL35A-208ENST00000485439 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
RPL35A-208ENST00000485439 DHX29Q7Z478 1369 aaKnown RBP12.28□□□□□ -0.44
RPL35A-208ENST00000485439 ZC3H13Q5T200 1668 aaKnown RBP12.27□□□□□ -0.45
RPL35A-208ENST00000485439 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
RPL35A-208ENST00000485439 ZMYM3Q14202 1370 aa12.26□□□□□ -0.45
RPL35A-208ENST00000485439 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
RPL35A-208ENST00000485439 PTPRKQ15262 1439 aa12.25□□□□□ -0.45
RPL35A-208ENST00000485439 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
RPL35A-208ENST00000485439 APLP2Q06481 763 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms