RNA–Protein interactions for RNA: ENST00000485092.5

SDHB-206, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-206ENST00000485092 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
SDHB-206ENST00000485092 KIF3CO14782 793 aa12.72□□□□□ -0.37
SDHB-206ENST00000485092 DOK7Q18PE1 504 aa12.71□□□□□ -0.37
SDHB-206ENST00000485092 ST18O60284 1047 aa12.7□□□□□ -0.38
SDHB-206ENST00000485092 LCE2DQ5TA82 110 aaPredicted RBP12.69□□□□□ -0.38
SDHB-206ENST00000485092 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
SDHB-206ENST00000485092 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
SDHB-206ENST00000485092 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
SDHB-206ENST00000485092 RIMBP2O15034 1052 aa12.66□□□□□ -0.38
SDHB-206ENST00000485092 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
SDHB-206ENST00000485092 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
SDHB-206ENST00000485092 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
SDHB-206ENST00000485092 POTEMA6NI47 508 aa12.61□□□□□ -0.39
SDHB-206ENST00000485092 PDE4AP27815 886 aa12.61□□□□□ -0.39
SDHB-206ENST00000485092 FOXK1P85037 733 aa12.61□□□□□ -0.39
SDHB-206ENST00000485092 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
SDHB-206ENST00000485092 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
SDHB-206ENST00000485092 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
SDHB-206ENST00000485092 DSG2Q14126 1118 aa12.58□□□□□ -0.4
SDHB-206ENST00000485092 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
SDHB-206ENST00000485092 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
SDHB-206ENST00000485092 HOXB1P14653 301 aaPredicted RBP12.55□□□□□ -0.4
SDHB-206ENST00000485092 MARVELD3Q96A59 401 aa12.55□□□□□ -0.4
SDHB-206ENST00000485092 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
SDHB-206ENST00000485092 SLC34A2O95436 690 aa12.54□□□□□ -0.4
SDHB-206ENST00000485092 EMP3P54852 163 aa12.54□□□□□ -0.4
SDHB-206ENST00000485092 PPP1R15BQ5SWA1 713 aa12.54□□□□□ -0.4
SDHB-206ENST00000485092 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
SDHB-206ENST00000485092 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
SDHB-206ENST00000485092 MFSD10Q14728 455 aa12.5□□□□□ -0.41
SDHB-206ENST00000485092 ARSIQ5FYB1 569 aa12.5□□□□□ -0.41
SDHB-206ENST00000485092 PCDHGA4Q9Y5G9 962 aa12.48□□□□□ -0.41
SDHB-206ENST00000485092 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
SDHB-206ENST00000485092 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
SDHB-206ENST00000485092 TBC1D12O60347 775 aa12.44□□□□□ -0.42
SDHB-206ENST00000485092 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.42
SDHB-206ENST00000485092 ERBB3P21860 1342 aa12.43□□□□□ -0.42
SDHB-206ENST00000485092 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
SDHB-206ENST00000485092 PCDH10Q9P2E7 1040 aa12.42□□□□□ -0.42
SDHB-206ENST00000485092 NUDT7P0C024 238 aa12.41□□□□□ -0.42
SDHB-206ENST00000485092 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
SDHB-206ENST00000485092 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
SDHB-206ENST00000485092 HS3ST6Q96QI5 342 aa12.4□□□□□ -0.42
SDHB-206ENST00000485092 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
SDHB-206ENST00000485092 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
SDHB-206ENST00000485092 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
SDHB-206ENST00000485092 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
SDHB-206ENST00000485092 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
SDHB-206ENST00000485092 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
SDHB-206ENST00000485092 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
SDHB-206ENST00000485092 CAMK2BQ13554 666 aa12.33□□□□□ -0.44
SDHB-206ENST00000485092 EMILIN3Q9NT22 766 aa12.33□□□□□ -0.44
SDHB-206ENST00000485092 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
SDHB-206ENST00000485092 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
SDHB-206ENST00000485092 MAP3K9P80192 1104 aa12.32□□□□□ -0.44
SDHB-206ENST00000485092 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
SDHB-206ENST00000485092 E2F4Q16254 413 aa12.28□□□□□ -0.44
SDHB-206ENST00000485092 EVI5O60447 810 aa12.27□□□□□ -0.45
SDHB-206ENST00000485092 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
SDHB-206ENST00000485092 ZNF687Q8N1G0 1237 aa12.26□□□□□ -0.45
SDHB-206ENST00000485092 DPYSL4O14531 572 aa12.24□□□□□ -0.45
SDHB-206ENST00000485092 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
SDHB-206ENST00000485092 PPP4R3BQ5MIZ7 849 aa12.21□□□□□ -0.45
SDHB-206ENST00000485092 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
SDHB-206ENST00000485092 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
SDHB-206ENST00000485092 ZNF454Q8N9F8 522 aa12.18□□□□□ -0.46
SDHB-206ENST00000485092 PBX2P40425 430 aa12.17□□□□□ -0.46
SDHB-206ENST00000485092 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
SDHB-206ENST00000485092 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
SDHB-206ENST00000485092 FOSBP53539 338 aa12.15□□□□□ -0.46
SDHB-206ENST00000485092 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
SDHB-206ENST00000485092 PDIA6Q15084 440 aa12.14□□□□□ -0.47
SDHB-206ENST00000485092 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
SDHB-206ENST00000485092 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
SDHB-206ENST00000485092 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
SDHB-206ENST00000485092 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
SDHB-206ENST00000485092 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
SDHB-206ENST00000485092 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
SDHB-206ENST00000485092 PLSCR2Q9NRY7 297 aa12.1□□□□□ -0.47
SDHB-206ENST00000485092 PTGER2P43116 358 aa12.09□□□□□ -0.47
SDHB-206ENST00000485092 POTEEQ6S8J3 1075 aa12.09□□□□□ -0.47
SDHB-206ENST00000485092 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
SDHB-206ENST00000485092 PHF14O94880 888 aa12.08□□□□□ -0.48
SDHB-206ENST00000485092 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
SDHB-206ENST00000485092 BCL2L12Q9HB09 334 aa12.08□□□□□ -0.48
SDHB-206ENST00000485092 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
SDHB-206ENST00000485092 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
SDHB-206ENST00000485092 KCNK17Q96T54 332 aa12.07□□□□□ -0.48
SDHB-206ENST00000485092 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
SDHB-206ENST00000485092 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
SDHB-206ENST00000485092 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
SDHB-206ENST00000485092 DDX12PQ92771 950 aa12.06□□□□□ -0.48
SDHB-206ENST00000485092 EPAS1Q99814 870 aa12.06□□□□□ -0.48
SDHB-206ENST00000485092 PSEN2P49810 448 aa12.05□□□□□ -0.48
SDHB-206ENST00000485092 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
SDHB-206ENST00000485092 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
SDHB-206ENST00000485092 PTPREP23469 700 aa12.04□□□□□ -0.48
SDHB-206ENST00000485092 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
SDHB-206ENST00000485092 NBR1Q14596 966 aa12□□□□□ -0.49
SDHB-206ENST00000485092 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms