RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 DENND4BO75064 1496 aaPredicted RBP25.75■■□□□ 1.71
DDR1-246ENST00000485023 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
DDR1-246ENST00000485023 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
DDR1-246ENST00000485023 CDC42BPBQ9Y5S2 1711 aa25.72■■□□□ 1.71
DDR1-246ENST00000485023 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
DDR1-246ENST00000485023 CDC42BPAQ5VT25 1732 aa25.71■■□□□ 1.71
DDR1-246ENST00000485023 RICTORQ6R327 1708 aa25.71■■□□□ 1.71
DDR1-246ENST00000485023 POGZQ7Z3K3 1410 aa25.66■■□□□ 1.7
DDR1-246ENST00000485023 GPATCH8Q9UKJ3 1502 aaKnown RBP25.66■■□□□ 1.7
DDR1-246ENST00000485023 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
DDR1-246ENST00000485023 ZNF777Q9ULD5 760 aaPredicted RBP25.64■■□□□ 1.7
DDR1-246ENST00000485023 ABCC1P33527 1531 aa25.62■■□□□ 1.69
DDR1-246ENST00000485023 ZMYM4Q5VZL5 1548 aa25.62■■□□□ 1.69
DDR1-246ENST00000485023 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
DDR1-246ENST00000485023 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
DDR1-246ENST00000485023 ARHGEF40Q8TER5 1519 aa25.6■■□□□ 1.69
DDR1-246ENST00000485023 KDM4FA0A1W2PPD8 638 aa25.6■■□□□ 1.69
DDR1-246ENST00000485023 NCOA2Q15596 1464 aa25.6■■□□□ 1.69
DDR1-246ENST00000485023 SAMD9LQ8IVG5 1584 aa25.59■■□□□ 1.69
DDR1-246ENST00000485023 CFDP1Q9UEE9 299 aaPredicted RBP25.58■■□□□ 1.69
DDR1-246ENST00000485023 ZFYVE16Q7Z3T8 1539 aa25.58■■□□□ 1.68
DDR1-246ENST00000485023 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
DDR1-246ENST00000485023 YEATS2Q9ULM3 1422 aa25.57■■□□□ 1.68
DDR1-246ENST00000485023 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
DDR1-246ENST00000485023 ITSN2Q9NZM3 1697 aa25.57■■□□□ 1.68
DDR1-246ENST00000485023 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
DDR1-246ENST00000485023 ZNF518AQ6AHZ1 1483 aa25.56■■□□□ 1.68
DDR1-246ENST00000485023 APLP2Q06481 763 aa25.55■■□□□ 1.68
DDR1-246ENST00000485023 AFAP1Q8N556 730 aa25.55■■□□□ 1.68
DDR1-246ENST00000485023 SYCP2Q9BX26 1530 aa25.54■■□□□ 1.68
DDR1-246ENST00000485023 TRAPPC8Q9Y2L5 1435 aa25.54■■□□□ 1.68
DDR1-246ENST00000485023 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
DDR1-246ENST00000485023 KDM5CP41229 1560 aa25.52■■□□□ 1.68
DDR1-246ENST00000485023 MAGI2Q86UL8 1455 aa25.51■■□□□ 1.67
DDR1-246ENST00000485023 ARID4BQ4LE39 1312 aaPredicted RBP25.5■■□□□ 1.67
DDR1-246ENST00000485023 HECW2Q9P2P5 1572 aa25.48■■□□□ 1.67
DDR1-246ENST00000485023 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
DDR1-246ENST00000485023 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
DDR1-246ENST00000485023 PLEKHH2Q8IVE3 1493 aa25.46■■□□□ 1.67
DDR1-246ENST00000485023 SIGLEC1Q9BZZ2 1709 aa25.44■■□□□ 1.66
DDR1-246ENST00000485023 KIAA1107Q9UPP5 1409 aa25.42■■□□□ 1.66
DDR1-246ENST00000485023 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
DDR1-246ENST00000485023 CAMSAP2Q08AD1 1489 aa25.41■■□□□ 1.66
DDR1-246ENST00000485023 DIP2CQ9Y2E4 1556 aa25.41■■□□□ 1.66
DDR1-246ENST00000485023 ATP10AO60312 1499 aa25.4■■□□□ 1.66
DDR1-246ENST00000485023 MLH3Q9UHC1 1453 aa25.4■■□□□ 1.66
DDR1-246ENST00000485023 C9orf84Q5VXU9 1444 aa25.4■■□□□ 1.66
DDR1-246ENST00000485023 BCORL1Q5H9F3 1711 aa25.38■■□□□ 1.65
DDR1-246ENST00000485023 KIDINS220Q9ULH0 1771 aa25.37■■□□□ 1.65
DDR1-246ENST00000485023 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
DDR1-246ENST00000485023 MYOM3Q5VTT5 1437 aa25.36■■□□□ 1.65
DDR1-246ENST00000485023 MBD5Q9P267 1494 aa25.35■■□□□ 1.65
DDR1-246ENST00000485023 MLECQ14165 292 aa25.35■■□□□ 1.65
DDR1-246ENST00000485023 ADAMTSL3P82987 1691 aa25.34■■□□□ 1.65
DDR1-246ENST00000485023 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
DDR1-246ENST00000485023 ATP7AQ04656 1500 aa25.33■■□□□ 1.65
DDR1-246ENST00000485023 INO80Q9ULG1 1556 aaPredicted RBP25.33■■□□□ 1.65
DDR1-246ENST00000485023 CCDC141Q6ZP82 1450 aa25.3■■□□□ 1.64
DDR1-246ENST00000485023 MIA2Q96PC5 1412 aa25.28■■□□□ 1.64
DDR1-246ENST00000485023 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
DDR1-246ENST00000485023 RIMS1Q86UR5 1692 aaKnown RBP25.26■■□□□ 1.63
DDR1-246ENST00000485023 ARHGEF5Q12774 1597 aa25.24■■□□□ 1.63
DDR1-246ENST00000485023 PTPRMP28827 1452 aa25.24■■□□□ 1.63
DDR1-246ENST00000485023 PPARGC1BQ86YN6 1023 aaKnown RBP25.24■■□□□ 1.63
DDR1-246ENST00000485023 PTPN23Q9H3S7 1636 aa25.23■■□□□ 1.63
DDR1-246ENST00000485023 PLPPR3Q6T4P5 718 aa25.22■■□□□ 1.63
DDR1-246ENST00000485023 FGD6Q6ZV73 1430 aa25.21■■□□□ 1.63
DDR1-246ENST00000485023 FER1L4A9Z1Z3 1794 aa25.21■■□□□ 1.63
DDR1-246ENST00000485023 A2MP01023 1474 aa25.2■■□□□ 1.62
DDR1-246ENST00000485023 AGLP35573 1532 aa25.19■■□□□ 1.62
DDR1-246ENST00000485023 RTEL1-TNFRSF6BF6WH68 1400 aa25.18■■□□□ 1.62
DDR1-246ENST00000485023 RSPH4AQ5TD94 716 aa25.17■■□□□ 1.62
DDR1-246ENST00000485023 PLXNC1O60486 1568 aa25.17■■□□□ 1.62
DDR1-246ENST00000485023 ADGBQ8N7X0 1667 aa25.17■■□□□ 1.62
DDR1-246ENST00000485023 TSPY4P0CV99 314 aa25.15■■□□□ 1.62
DDR1-246ENST00000485023 TSPY10P0CW01 314 aa25.15■■□□□ 1.62
DDR1-246ENST00000485023 TCOF1Q13428 1488 aaKnown RBP25.13■■□□□ 1.61
DDR1-246ENST00000485023 MAST1Q9Y2H9 1570 aa25.11■■□□□ 1.61
DDR1-246ENST00000485023 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
DDR1-246ENST00000485023 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
DDR1-246ENST00000485023 ABCC5O15440 1437 aa25.09■■□□□ 1.61
DDR1-246ENST00000485023 DAPK1P53355 1430 aa25.08■■□□□ 1.61
DDR1-246ENST00000485023 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.6
DDR1-246ENST00000485023 ESF1Q9H501 851 aaKnown RBP25.07■■□□□ 1.6
DDR1-246ENST00000485023 DHX29Q7Z478 1369 aaKnown RBP25.06■■□□□ 1.6
DDR1-246ENST00000485023 CEBPAP49715 358 aaPredicted RBP25.05■■□□□ 1.6
DDR1-246ENST00000485023 GGT6Q6P531 493 aa25.05■■□□□ 1.6
DDR1-246ENST00000485023 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
DDR1-246ENST00000485023 KIF3BO15066 747 aa25.01■■□□□ 1.59
DDR1-246ENST00000485023 CHIC2Q9UKJ5 165 aa25.01■■□□□ 1.59
DDR1-246ENST00000485023 C3P01024 1663 aa24.98■■□□□ 1.59
DDR1-246ENST00000485023 CLTCQ00610 1675 aaKnown RBP24.98■■□□□ 1.59
DDR1-246ENST00000485023 CNTLNQ9NXG0 1405 aa24.97■■□□□ 1.59
DDR1-246ENST00000485023 KIF15Q9NS87 1388 aa24.97■■□□□ 1.59
DDR1-246ENST00000485023 RRP7BPQ9NSQ0 103 aa24.97■■□□□ 1.59
DDR1-246ENST00000485023 DUOX2Q9NRD8 1548 aa24.94■■□□□ 1.58
DDR1-246ENST00000485023 MROH2AA6NES4 1674 aa24.92■■□□□ 1.58
DDR1-246ENST00000485023 LMTK3Q96Q04 1460 aa24.92■■□□□ 1.58
DDR1-246ENST00000485023 ANKRD30AQ9BXX3 1397 aa24.91■■□□□ 1.58
DDR1-246ENST00000485023 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms