RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 ST18O60284 1047 aa8.2□□□□□ -1.1
SGIP1-211ENST00000484988 C2orf72A6NCS6 295 aa8.19□□□□□ -1.1
SGIP1-211ENST00000484988 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
SGIP1-211ENST00000484988 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
SGIP1-211ENST00000484988 POTEMA6NI47 508 aa8.14□□□□□ -1.11
SGIP1-211ENST00000484988 DOK7Q18PE1 504 aa8.14□□□□□ -1.11
SGIP1-211ENST00000484988 POTEGQ6S5H5 508 aa8.14□□□□□ -1.11
SGIP1-211ENST00000484988 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-211ENST00000484988 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-211ENST00000484988 SPRYD3Q8NCJ5 442 aa8.13□□□□□ -1.11
SGIP1-211ENST00000484988 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
SGIP1-211ENST00000484988 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
SGIP1-211ENST00000484988 FOXK1P85037 733 aa8.11□□□□□ -1.11
SGIP1-211ENST00000484988 ZSWIM6Q9HCJ5 1215 aa8.1□□□□□ -1.11
SGIP1-211ENST00000484988 NCKAP5LQ9HCH0 1330 aa8.09□□□□□ -1.11
SGIP1-211ENST00000484988 SLC34A2O95436 690 aa8.09□□□□□ -1.11
SGIP1-211ENST00000484988 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
SGIP1-211ENST00000484988 GPR153Q6NV75 609 aa8.09□□□□□ -1.11
SGIP1-211ENST00000484988 PAXIP1Q6ZW49 1069 aaPredicted RBP8.09□□□□□ -1.11
SGIP1-211ENST00000484988 ZNF710Q8N1W2 664 aa8.09□□□□□ -1.11
SGIP1-211ENST00000484988 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
SGIP1-211ENST00000484988 PDE4AP27815 886 aa8.08□□□□□ -1.12
SGIP1-211ENST00000484988 DSG2Q14126 1118 aa8.08□□□□□ -1.12
SGIP1-211ENST00000484988 CADPS2Q86UW7 1296 aa8.08□□□□□ -1.12
SGIP1-211ENST00000484988 PLPP6Q8IY26 295 aa8.07□□□□□ -1.12
SGIP1-211ENST00000484988 MARVELD3Q96A59 401 aa8.07□□□□□ -1.12
SGIP1-211ENST00000484988 CFAP44Q96MT7 982 aa8.07□□□□□ -1.12
SGIP1-211ENST00000484988 EMP3P54852 163 aa8.04□□□□□ -1.12
SGIP1-211ENST00000484988 MFSD10Q14728 455 aa8.04□□□□□ -1.12
SGIP1-211ENST00000484988 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
SGIP1-211ENST00000484988 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
SGIP1-211ENST00000484988 PTCD2Q8WV60 388 aaKnown RBP8.03□□□□□ -1.12
SGIP1-211ENST00000484988 LARP6Q9BRS8 491 aaKnown RBP8.03□□□□□ -1.12
SGIP1-211ENST00000484988 POTEB3A0JP26 581 aa8.02□□□□□ -1.13
SGIP1-211ENST00000484988 POTEBQ6S5H4 581 aa8.02□□□□□ -1.13
SGIP1-211ENST00000484988 PCDHGA4Q9Y5G9 962 aa8.02□□□□□ -1.13
SGIP1-211ENST00000484988 KHSRPQ92945 711 aaKnown RBP eCLIP8.01□□□□□ -1.13
SGIP1-211ENST00000484988 FAM205CA6NFA0 338 aa8□□□□□ -1.13
SGIP1-211ENST00000484988 DDX27Q96GQ7 796 aaKnown RBP8□□□□□ -1.13
SGIP1-211ENST00000484988 HS3ST6Q96QI5 342 aa7.99□□□□□ -1.13
SGIP1-211ENST00000484988 KDM4FA0A1W2PPD8 638 aa7.98□□□□□ -1.13
SGIP1-211ENST00000484988 CDAN1Q8IWY9 1227 aa7.98□□□□□ -1.13
SGIP1-211ENST00000484988 OXER1Q8TDS5 423 aa7.98□□□□□ -1.13
SGIP1-211ENST00000484988 NUDT7P0C024 238 aa7.97□□□□□ -1.13
SGIP1-211ENST00000484988 ERBB3P21860 1342 aa7.97□□□□□ -1.13
SGIP1-211ENST00000484988 ZNF316A6NFI3 1004 aaPredicted RBP7.96□□□□□ -1.14
SGIP1-211ENST00000484988 TBC1D12O60347 775 aa7.95□□□□□ -1.14
SGIP1-211ENST00000484988 CAMK2BQ13554 666 aa7.94□□□□□ -1.14
SGIP1-211ENST00000484988 VARS2Q5ST30 1063 aaKnown RBP7.94□□□□□ -1.14
SGIP1-211ENST00000484988 TSHZ2Q9NRE2 1034 aa7.94□□□□□ -1.14
SGIP1-211ENST00000484988 UPF1Q92900 1129 aaKnown RBP eCLIP7.93□□□□□ -1.14
SGIP1-211ENST00000484988 EMILIN3Q9NT22 766 aa7.93□□□□□ -1.14
SGIP1-211ENST00000484988 LHX6Q9UPM6 363 aa7.93□□□□□ -1.14
SGIP1-211ENST00000484988 PLCB2Q00722 1185 aa7.92□□□□□ -1.14
SGIP1-211ENST00000484988 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
SGIP1-211ENST00000484988 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
SGIP1-211ENST00000484988 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
SGIP1-211ENST00000484988 ANO8Q9HCE9 1232 aaPredicted RBP7.9□□□□□ -1.14
SGIP1-211ENST00000484988 MAP3K9P80192 1104 aa7.88□□□□□ -1.15
SGIP1-211ENST00000484988 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
SGIP1-211ENST00000484988 EVI5O60447 810 aa7.86□□□□□ -1.15
SGIP1-211ENST00000484988 E2F4Q16254 413 aa7.86□□□□□ -1.15
SGIP1-211ENST00000484988 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
SGIP1-211ENST00000484988 POTEEQ6S8J3 1075 aa7.84□□□□□ -1.15
SGIP1-211ENST00000484988 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
SGIP1-211ENST00000484988 DPYSL4O14531 572 aa7.83□□□□□ -1.16
SGIP1-211ENST00000484988 FOSBP53539 338 aa7.82□□□□□ -1.16
SGIP1-211ENST00000484988 PBX2P40425 430 aa7.81□□□□□ -1.16
SGIP1-211ENST00000484988 PPP4R3BQ5MIZ7 849 aa7.8□□□□□ -1.16
SGIP1-211ENST00000484988 SPNS2Q8IVW8 549 aa7.8□□□□□ -1.16
SGIP1-211ENST00000484988 ZNF454Q8N9F8 522 aa7.79□□□□□ -1.16
SGIP1-211ENST00000484988 JPH4Q96JJ6 628 aa7.79□□□□□ -1.16
SGIP1-211ENST00000484988 SPDYE16A6NNV3 312 aaPredicted RBP7.78□□□□□ -1.16
SGIP1-211ENST00000484988 PTGER2P43116 358 aa7.78□□□□□ -1.16
SGIP1-211ENST00000484988 PDIA6Q15084 440 aa7.78□□□□□ -1.16
SGIP1-211ENST00000484988 AXIN2Q9Y2T1 843 aa7.78□□□□□ -1.16
SGIP1-211ENST00000484988 ARHGAP33O14559 1287 aa7.77□□□□□ -1.17
SGIP1-211ENST00000484988 HAP1P54257 671 aaPredicted RBP7.77□□□□□ -1.17
SGIP1-211ENST00000484988 LSM11P83369 360 aaKnown RBP eCLIP7.77□□□□□ -1.17
SGIP1-211ENST00000484988 BCL2L12Q9HB09 334 aa7.77□□□□□ -1.17
SGIP1-211ENST00000484988 PCDHGA10Q9Y5H3 936 aa7.77□□□□□ -1.17
SGIP1-211ENST00000484988 PHF14O94880 888 aa7.76□□□□□ -1.17
SGIP1-211ENST00000484988 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
SGIP1-211ENST00000484988 PSEN2P49810 448 aa7.74□□□□□ -1.17
SGIP1-211ENST00000484988 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
SGIP1-211ENST00000484988 ADAM33Q9BZ11 813 aa7.74□□□□□ -1.17
SGIP1-211ENST00000484988 MMRN1Q13201 1228 aa7.73□□□□□ -1.17
SGIP1-211ENST00000484988 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
SGIP1-211ENST00000484988 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
SGIP1-211ENST00000484988 ANKRD13DQ6ZTN6 518 aa7.73□□□□□ -1.17
SGIP1-211ENST00000484988 ARHGEF1Q92888 912 aaKnown RBP7.73□□□□□ -1.17
SGIP1-211ENST00000484988 EPAS1Q99814 870 aa7.73□□□□□ -1.17
SGIP1-211ENST00000484988 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
SGIP1-211ENST00000484988 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
SGIP1-211ENST00000484988 KCNK17Q96T54 332 aa7.72□□□□□ -1.17
SGIP1-211ENST00000484988 DDX12PQ92771 950 aa7.71□□□□□ -1.18
SGIP1-211ENST00000484988 TK2O00142 265 aa7.7□□□□□ -1.18
SGIP1-211ENST00000484988 PTPREP23469 700 aa7.7□□□□□ -1.18
SGIP1-211ENST00000484988 ADGRD1Q6QNK2 874 aa7.69□□□□□ -1.18
SGIP1-211ENST00000484988 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms