RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 C2orf72A6NCS6 295 aa17.17■□□□□ 0.34
UBR3-210ENST00000484596 KIF3CO14782 793 aa17.17■□□□□ 0.34
UBR3-210ENST00000484596 GTPBP6O43824 516 aaPredicted RBP17.17■□□□□ 0.34
UBR3-210ENST00000484596 DOK7Q18PE1 504 aa17.16■□□□□ 0.34
UBR3-210ENST00000484596 MARVELD3Q96A59 401 aa17.15■□□□□ 0.34
UBR3-210ENST00000484596 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
UBR3-210ENST00000484596 TMC2Q8TDI7 906 aa17.11■□□□□ 0.33
UBR3-210ENST00000484596 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
UBR3-210ENST00000484596 EMP3P54852 163 aa17.04■□□□□ 0.32
UBR3-210ENST00000484596 BBXQ8WY36 941 aaPredicted RBP17.04■□□□□ 0.32
UBR3-210ENST00000484596 HOXB1P14653 301 aaPredicted RBP17.03■□□□□ 0.32
UBR3-210ENST00000484596 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
UBR3-210ENST00000484596 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
UBR3-210ENST00000484596 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
UBR3-210ENST00000484596 GPR153Q6NV75 609 aa16.98■□□□□ 0.31
UBR3-210ENST00000484596 CDAN1Q8IWY9 1227 aa16.97■□□□□ 0.31
UBR3-210ENST00000484596 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
UBR3-210ENST00000484596 FOXK1P85037 733 aa16.94■□□□□ 0.3
UBR3-210ENST00000484596 ARSIQ5FYB1 569 aa16.94■□□□□ 0.3
UBR3-210ENST00000484596 POTEB3A0JP26 581 aa16.92■□□□□ 0.3
UBR3-210ENST00000484596 DSG2Q14126 1118 aa16.92■□□□□ 0.3
UBR3-210ENST00000484596 POTEBQ6S5H4 581 aa16.92■□□□□ 0.3
UBR3-210ENST00000484596 HS3ST6Q96QI5 342 aa16.91■□□□□ 0.3
UBR3-210ENST00000484596 CRISPLD2Q9H0B8 497 aa16.91■□□□□ 0.3
UBR3-210ENST00000484596 SLC34A2O95436 690 aa16.9■□□□□ 0.3
UBR3-210ENST00000484596 PLPP6Q8IY26 295 aa16.9■□□□□ 0.3
UBR3-210ENST00000484596 KHSRPQ92945 711 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBR3-210ENST00000484596 NCKAP5LQ9HCH0 1330 aa16.88■□□□□ 0.29
UBR3-210ENST00000484596 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
UBR3-210ENST00000484596 ERBB3P21860 1342 aa16.86■□□□□ 0.29
UBR3-210ENST00000484596 PDE4AP27815 886 aa16.85■□□□□ 0.29
UBR3-210ENST00000484596 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
UBR3-210ENST00000484596 PCDHGA4Q9Y5G9 962 aa16.84■□□□□ 0.29
UBR3-210ENST00000484596 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
UBR3-210ENST00000484596 NUDT7P0C024 238 aa16.79■□□□□ 0.28
UBR3-210ENST00000484596 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
UBR3-210ENST00000484596 PPP1R15BQ5SWA1 713 aa16.79■□□□□ 0.28
UBR3-210ENST00000484596 PTCD2Q8WV60 388 aaKnown RBP16.79■□□□□ 0.28
UBR3-210ENST00000484596 LARP6Q9BRS8 491 aaKnown RBP16.79■□□□□ 0.28
UBR3-210ENST00000484596 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
UBR3-210ENST00000484596 PLSCR2Q9NRY7 297 aa16.78■□□□□ 0.28
UBR3-210ENST00000484596 CFAP44Q96MT7 982 aa16.76■□□□□ 0.27
UBR3-210ENST00000484596 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
UBR3-210ENST00000484596 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
UBR3-210ENST00000484596 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
UBR3-210ENST00000484596 MFSD10Q14728 455 aa16.71■□□□□ 0.27
UBR3-210ENST00000484596 KRTAP3-3Q9BYR6 98 aa16.69■□□□□ 0.26
UBR3-210ENST00000484596 KRTAP3-2Q9BYR7 98 aa16.69■□□□□ 0.26
UBR3-210ENST00000484596 LHX6Q9UPM6 363 aa16.69■□□□□ 0.26
UBR3-210ENST00000484596 TBC1D12O60347 775 aa16.68■□□□□ 0.26
UBR3-210ENST00000484596 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
UBR3-210ENST00000484596 OXER1Q8TDS5 423 aa16.67■□□□□ 0.26
UBR3-210ENST00000484596 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBR3-210ENST00000484596 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
UBR3-210ENST00000484596 SPNS2Q8IVW8 549 aa16.56■□□□□ 0.24
UBR3-210ENST00000484596 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
UBR3-210ENST00000484596 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
UBR3-210ENST00000484596 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
UBR3-210ENST00000484596 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
UBR3-210ENST00000484596 CAMK2BQ13554 666 aa16.48■□□□□ 0.23
UBR3-210ENST00000484596 EVI5O60447 810 aa16.47■□□□□ 0.23
UBR3-210ENST00000484596 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
UBR3-210ENST00000484596 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
UBR3-210ENST00000484596 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
UBR3-210ENST00000484596 PBX2P40425 430 aa16.43■□□□□ 0.22
UBR3-210ENST00000484596 MMRN1Q13201 1228 aa16.43■□□□□ 0.22
UBR3-210ENST00000484596 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
UBR3-210ENST00000484596 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
UBR3-210ENST00000484596 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
UBR3-210ENST00000484596 LSM11P83369 360 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBR3-210ENST00000484596 ZNF454Q8N9F8 522 aa16.39■□□□□ 0.21
UBR3-210ENST00000484596 DPYSL4O14531 572 aa16.38■□□□□ 0.21
UBR3-210ENST00000484596 WDR70Q9NW82 654 aa16.38■□□□□ 0.21
UBR3-210ENST00000484596 ARHGAP33O14559 1287 aa16.37■□□□□ 0.21
UBR3-210ENST00000484596 FOSBP53539 338 aa16.36■□□□□ 0.21
UBR3-210ENST00000484596 E2F4Q16254 413 aa16.34■□□□□ 0.21
UBR3-210ENST00000484596 JPH4Q96JJ6 628 aa16.33■□□□□ 0.2
UBR3-210ENST00000484596 PSEN2P49810 448 aa16.32■□□□□ 0.2
UBR3-210ENST00000484596 DMRTA1Q5VZB9 504 aa16.28■□□□□ 0.2
UBR3-210ENST00000484596 KCNK17Q96T54 332 aa16.28■□□□□ 0.2
UBR3-210ENST00000484596 BCL2L12Q9HB09 334 aa16.27■□□□□ 0.2
UBR3-210ENST00000484596 HAP1P54257 671 aaPredicted RBP16.25■□□□□ 0.19
UBR3-210ENST00000484596 ZDHHC16Q969W1 377 aa16.25■□□□□ 0.19
UBR3-210ENST00000484596 PCDHGA10Q9Y5H3 936 aa16.25■□□□□ 0.19
UBR3-210ENST00000484596 ADAM33Q9BZ11 813 aa16.23■□□□□ 0.19
UBR3-210ENST00000484596 ADGRD1Q6QNK2 874 aa16.22■□□□□ 0.19
UBR3-210ENST00000484596 MYT1LQ9UL68 1186 aa16.22■□□□□ 0.19
UBR3-210ENST00000484596 PTGER2P43116 358 aa16.21■□□□□ 0.19
UBR3-210ENST00000484596 KCNH8Q96L42 1107 aa16.21■□□□□ 0.19
UBR3-210ENST00000484596 PHF14O94880 888 aa16.2■□□□□ 0.18
UBR3-210ENST00000484596 PDIA6Q15084 440 aa16.2■□□□□ 0.18
UBR3-210ENST00000484596 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
UBR3-210ENST00000484596 PTPREP23469 700 aa16.19■□□□□ 0.18
UBR3-210ENST00000484596 TK2O00142 265 aa16.18■□□□□ 0.18
UBR3-210ENST00000484596 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
UBR3-210ENST00000484596 SPDYE16A6NNV3 312 aaPredicted RBP16.17■□□□□ 0.18
UBR3-210ENST00000484596 DDX12PQ92771 950 aa16.17■□□□□ 0.18
UBR3-210ENST00000484596 RNF166Q96A37 237 aaPredicted RBP16.17■□□□□ 0.18
UBR3-210ENST00000484596 FBXW7Q969H0 707 aa16.15■□□□□ 0.18
UBR3-210ENST00000484596 EPAS1Q99814 870 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms