RNA–Protein interactions for RNA: ENST00000484398.1

CAB39-205, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-205ENST00000484398 ZNF710Q8N1W2 664 aa18.18■□□□□ 0.5
CAB39-205ENST00000484398 PCDH10Q9P2E7 1040 aa18.17■□□□□ 0.5
CAB39-205ENST00000484398 MARVELD3Q96A59 401 aa18.15■□□□□ 0.5
CAB39-205ENST00000484398 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
CAB39-205ENST00000484398 TMC2Q8TDI7 906 aa18.11■□□□□ 0.49
CAB39-205ENST00000484398 RTN4Q9NQC3 1192 aaKnown RBP18.11■□□□□ 0.49
CAB39-205ENST00000484398 C2orf72A6NCS6 295 aa18.1■□□□□ 0.49
CAB39-205ENST00000484398 EMP3P54852 163 aa18.09■□□□□ 0.49
CAB39-205ENST00000484398 KIF3CO14782 793 aa18.07■□□□□ 0.48
CAB39-205ENST00000484398 HOXB1P14653 301 aaPredicted RBP18.03■□□□□ 0.48
CAB39-205ENST00000484398 CDAN1Q8IWY9 1227 aa18.03■□□□□ 0.48
CAB39-205ENST00000484398 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
CAB39-205ENST00000484398 GTPBP6O43824 516 aaPredicted RBP18■□□□□ 0.47
CAB39-205ENST00000484398 FAM205CA6NFA0 338 aa17.96■□□□□ 0.47
CAB39-205ENST00000484398 GPR153Q6NV75 609 aa17.92■□□□□ 0.46
CAB39-205ENST00000484398 PLSCR2Q9NRY7 297 aa17.92■□□□□ 0.46
CAB39-205ENST00000484398 HS3ST6Q96QI5 342 aa17.91■□□□□ 0.46
CAB39-205ENST00000484398 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
CAB39-205ENST00000484398 ARSIQ5FYB1 569 aa17.89■□□□□ 0.45
CAB39-205ENST00000484398 ERBB3P21860 1342 aa17.89■□□□□ 0.45
CAB39-205ENST00000484398 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
CAB39-205ENST00000484398 FOXK1P85037 733 aa17.86■□□□□ 0.45
CAB39-205ENST00000484398 SLC34A2O95436 690 aa17.85■□□□□ 0.45
CAB39-205ENST00000484398 PLPP6Q8IY26 295 aa17.83■□□□□ 0.44
CAB39-205ENST00000484398 POTEB3A0JP26 581 aa17.82■□□□□ 0.44
CAB39-205ENST00000484398 POTEBQ6S5H4 581 aa17.82■□□□□ 0.44
CAB39-205ENST00000484398 DSG2Q14126 1118 aa17.81■□□□□ 0.44
CAB39-205ENST00000484398 KHSRPQ92945 711 aaKnown RBP eCLIP17.79■□□□□ 0.44
CAB39-205ENST00000484398 CRISPLD2Q9H0B8 497 aa17.79■□□□□ 0.44
CAB39-205ENST00000484398 PCDHGA4Q9Y5G9 962 aa17.79■□□□□ 0.44
CAB39-205ENST00000484398 VARS2Q5ST30 1063 aaKnown RBP17.78■□□□□ 0.44
CAB39-205ENST00000484398 PDE4AP27815 886 aa17.77■□□□□ 0.44
CAB39-205ENST00000484398 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
CAB39-205ENST00000484398 NUDT7P0C024 238 aa17.73■□□□□ 0.43
CAB39-205ENST00000484398 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
CAB39-205ENST00000484398 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
CAB39-205ENST00000484398 PTCD2Q8WV60 388 aaKnown RBP17.71■□□□□ 0.43
CAB39-205ENST00000484398 PPP1R15BQ5SWA1 713 aa17.7■□□□□ 0.42
CAB39-205ENST00000484398 SPRYD3Q8NCJ5 442 aa17.69■□□□□ 0.42
CAB39-205ENST00000484398 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
CAB39-205ENST00000484398 TBC1D12O60347 775 aa17.67■□□□□ 0.42
CAB39-205ENST00000484398 ZNF687Q8N1G0 1237 aa17.64■□□□□ 0.41
CAB39-205ENST00000484398 DDX27Q96GQ7 796 aaKnown RBP17.64■□□□□ 0.41
CAB39-205ENST00000484398 KRTAP3-3Q9BYR6 98 aa17.64■□□□□ 0.41
CAB39-205ENST00000484398 KRTAP3-2Q9BYR7 98 aa17.64■□□□□ 0.41
CAB39-205ENST00000484398 LHX6Q9UPM6 363 aa17.62■□□□□ 0.41
CAB39-205ENST00000484398 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
CAB39-205ENST00000484398 UPF1Q92900 1129 aaKnown RBP eCLIP17.58■□□□□ 0.4
CAB39-205ENST00000484398 MFSD10Q14728 455 aa17.57■□□□□ 0.4
CAB39-205ENST00000484398 PAXIP1Q6ZW49 1069 aaPredicted RBP17.57■□□□□ 0.4
CAB39-205ENST00000484398 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
CAB39-205ENST00000484398 CFAP44Q96MT7 982 aa17.57■□□□□ 0.4
CAB39-205ENST00000484398 SPNS2Q8IVW8 549 aa17.56■□□□□ 0.4
CAB39-205ENST00000484398 KDM4FA0A1W2PPD8 638 aa17.54■□□□□ 0.4
CAB39-205ENST00000484398 PSDA5PKW4 1024 aaPredicted RBP17.54■□□□□ 0.4
CAB39-205ENST00000484398 PBX2P40425 430 aa17.45■□□□□ 0.38
CAB39-205ENST00000484398 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
CAB39-205ENST00000484398 MAP3K9P80192 1104 aa17.42■□□□□ 0.38
CAB39-205ENST00000484398 PPP4R3BQ5MIZ7 849 aa17.41■□□□□ 0.38
CAB39-205ENST00000484398 EMILIN3Q9NT22 766 aa17.39■□□□□ 0.37
CAB39-205ENST00000484398 ANKRD13DQ6ZTN6 518 aa17.38■□□□□ 0.37
CAB39-205ENST00000484398 EVI5O60447 810 aa17.37■□□□□ 0.37
CAB39-205ENST00000484398 LSM11P83369 360 aaKnown RBP eCLIP17.37■□□□□ 0.37
CAB39-205ENST00000484398 AXIN2Q9Y2T1 843 aa17.36■□□□□ 0.37
CAB39-205ENST00000484398 ARHGAP33O14559 1287 aa17.33■□□□□ 0.36
CAB39-205ENST00000484398 CAMK2BQ13554 666 aa17.33■□□□□ 0.36
CAB39-205ENST00000484398 POTEEQ6S8J3 1075 aa17.33■□□□□ 0.36
CAB39-205ENST00000484398 ZNF454Q8N9F8 522 aa17.32■□□□□ 0.36
CAB39-205ENST00000484398 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
CAB39-205ENST00000484398 KCNH8Q96L42 1107 aa17.28■□□□□ 0.36
CAB39-205ENST00000484398 WDR70Q9NW82 654 aa17.28■□□□□ 0.36
CAB39-205ENST00000484398 PTGER2P43116 358 aa17.27■□□□□ 0.36
CAB39-205ENST00000484398 FOSBP53539 338 aa17.25■□□□□ 0.35
CAB39-205ENST00000484398 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
CAB39-205ENST00000484398 DPYSL4O14531 572 aa17.23■□□□□ 0.35
CAB39-205ENST00000484398 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
CAB39-205ENST00000484398 PSEN2P49810 448 aa17.22■□□□□ 0.35
CAB39-205ENST00000484398 KCNK17Q96T54 332 aa17.22■□□□□ 0.35
CAB39-205ENST00000484398 E2F4Q16254 413 aa17.19■□□□□ 0.34
CAB39-205ENST00000484398 RNF166Q96A37 237 aaPredicted RBP17.19■□□□□ 0.34
CAB39-205ENST00000484398 BCL2L12Q9HB09 334 aa17.19■□□□□ 0.34
CAB39-205ENST00000484398 DMRTA1Q5VZB9 504 aa17.18■□□□□ 0.34
CAB39-205ENST00000484398 ZDHHC16Q969W1 377 aa17.18■□□□□ 0.34
CAB39-205ENST00000484398 ADGRD1Q6QNK2 874 aa17.17■□□□□ 0.34
CAB39-205ENST00000484398 TK2O00142 265 aa17.15■□□□□ 0.34
CAB39-205ENST00000484398 TSHZ2Q9NRE2 1034 aa17.15■□□□□ 0.34
CAB39-205ENST00000484398 PTPREP23469 700 aa17.14■□□□□ 0.33
CAB39-205ENST00000484398 PCDHGA10Q9Y5H3 936 aa17.12■□□□□ 0.33
CAB39-205ENST00000484398 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
CAB39-205ENST00000484398 PHF14O94880 888 aa17.1■□□□□ 0.33
CAB39-205ENST00000484398 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
CAB39-205ENST00000484398 TYW1BQ6NUM6 668 aa17.08■□□□□ 0.32
CAB39-205ENST00000484398 SPDYE16A6NNV3 312 aaPredicted RBP17.06■□□□□ 0.32
CAB39-205ENST00000484398 PDIA6Q15084 440 aa17.06■□□□□ 0.32
CAB39-205ENST00000484398 STAC3Q96MF2 364 aa17.04■□□□□ 0.32
CAB39-205ENST00000484398 EPAS1Q99814 870 aa17.04■□□□□ 0.32
CAB39-205ENST00000484398 DDX12PQ92771 950 aa17.03■□□□□ 0.32
CAB39-205ENST00000484398 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
CAB39-205ENST00000484398 HRO43593 1189 aa17.02■□□□□ 0.32
CAB39-205ENST00000484398 SLC4A5Q9BY07 1137 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms