RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 PLCH2O75038 1416 aa24.38■■□□□ 1.49
RFTN1-209ENST00000483671 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
RFTN1-209ENST00000483671 PTPRKQ15262 1439 aa24.37■■□□□ 1.49
RFTN1-209ENST00000483671 KCNH8Q96L42 1107 aa24.37■■□□□ 1.49
RFTN1-209ENST00000483671 ZNF644Q9H582 1327 aaPredicted RBP24.35■■□□□ 1.49
RFTN1-209ENST00000483671 ITGAEP38570 1179 aa24.35■■□□□ 1.49
RFTN1-209ENST00000483671 DAPK1P53355 1430 aa24.34■■□□□ 1.49
RFTN1-209ENST00000483671 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
RFTN1-209ENST00000483671 ABCC5O15440 1437 aa24.33■■□□□ 1.49
RFTN1-209ENST00000483671 ARHGAP5Q13017 1502 aa24.32■■□□□ 1.48
RFTN1-209ENST00000483671 PLEKHH2Q8IVE3 1493 aa24.31■■□□□ 1.48
RFTN1-209ENST00000483671 SAMD9LQ8IVG5 1584 aa24.31■■□□□ 1.48
RFTN1-209ENST00000483671 HFM1A2PYH4 1435 aa24.31■■□□□ 1.48
RFTN1-209ENST00000483671 ARHGEF5Q12774 1597 aa24.3■■□□□ 1.48
RFTN1-209ENST00000483671 SETD5Q9C0A6 1442 aa24.3■■□□□ 1.48
RFTN1-209ENST00000483671 KIAA1107Q9UPP5 1409 aa24.3■■□□□ 1.48
RFTN1-209ENST00000483671 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
RFTN1-209ENST00000483671 MBD5Q9P267 1494 aa24.28■■□□□ 1.48
RFTN1-209ENST00000483671 HRCP23327 699 aa24.28■■□□□ 1.48
RFTN1-209ENST00000483671 SHANK2Q9UPX8 1470 aa24.27■■□□□ 1.48
RFTN1-209ENST00000483671 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
RFTN1-209ENST00000483671 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
RFTN1-209ENST00000483671 EFCAB2Q5VUJ9 269 aa24.26■■□□□ 1.47
RFTN1-209ENST00000483671 ZNF777Q9ULD5 760 aaPredicted RBP24.26■■□□□ 1.47
RFTN1-209ENST00000483671 GLI2P10070 1586 aa24.24■■□□□ 1.47
RFTN1-209ENST00000483671 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
RFTN1-209ENST00000483671 NAIPQ13075 1403 aa24.23■■□□□ 1.47
RFTN1-209ENST00000483671 RAB3GAP2Q9H2M9 1393 aa24.23■■□□□ 1.47
RFTN1-209ENST00000483671 ABCC1P33527 1531 aa24.21■■□□□ 1.47
RFTN1-209ENST00000483671 CCDC141Q6ZP82 1450 aa24.21■■□□□ 1.47
RFTN1-209ENST00000483671 GCC2Q8IWJ2 1684 aa24.19■■□□□ 1.46
RFTN1-209ENST00000483671 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
RFTN1-209ENST00000483671 FANCAO15360 1455 aa24.18■■□□□ 1.46
RFTN1-209ENST00000483671 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
RFTN1-209ENST00000483671 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
RFTN1-209ENST00000483671 MAST1Q9Y2H9 1570 aa24.16■■□□□ 1.46
RFTN1-209ENST00000483671 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
RFTN1-209ENST00000483671 NCOA1Q15788 1441 aa24.15■■□□□ 1.46
RFTN1-209ENST00000483671 C9orf84Q5VXU9 1444 aa24.15■■□□□ 1.46
RFTN1-209ENST00000483671 MAP3K4Q9Y6R4 1608 aa24.15■■□□□ 1.46
RFTN1-209ENST00000483671 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.46
RFTN1-209ENST00000483671 CFAP74Q9C0B2 1584 aa24.14■■□□□ 1.46
RFTN1-209ENST00000483671 DIP2BQ9P265 1576 aa24.14■■□□□ 1.46
RFTN1-209ENST00000483671 CHIC2Q9UKJ5 165 aa24.13■■□□□ 1.45
RFTN1-209ENST00000483671 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
RFTN1-209ENST00000483671 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
RFTN1-209ENST00000483671 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
RFTN1-209ENST00000483671 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
RFTN1-209ENST00000483671 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
RFTN1-209ENST00000483671 DHX57Q6P158 1386 aaKnown RBP24.1■■□□□ 1.45
RFTN1-209ENST00000483671 NEO1Q92859 1461 aa24.09■■□□□ 1.45
RFTN1-209ENST00000483671 RRP7BPQ9NSQ0 103 aa24.09■■□□□ 1.45
RFTN1-209ENST00000483671 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.44
RFTN1-209ENST00000483671 ADGRL1O94910 1474 aa24.07■■□□□ 1.44
RFTN1-209ENST00000483671 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
RFTN1-209ENST00000483671 DNAJC5Q9H3Z4 198 aa24.06■■□□□ 1.44
RFTN1-209ENST00000483671 TRAPPC8Q9Y2L5 1435 aa24.06■■□□□ 1.44
RFTN1-209ENST00000483671 PLXNC1O60486 1568 aa24.05■■□□□ 1.44
RFTN1-209ENST00000483671 RTEL1-TNFRSF6BF6WH68 1400 aa24.04■■□□□ 1.44
RFTN1-209ENST00000483671 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
RFTN1-209ENST00000483671 KDM6BO15054 1643 aa24.01■■□□□ 1.43
RFTN1-209ENST00000483671 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
RFTN1-209ENST00000483671 KIF15Q9NS87 1388 aa23.99■■□□□ 1.43
RFTN1-209ENST00000483671 ANKRD50Q9ULJ7 1429 aa23.98■■□□□ 1.43
RFTN1-209ENST00000483671 ZNF518AQ6AHZ1 1483 aa23.97■■□□□ 1.43
RFTN1-209ENST00000483671 ZFYVE16Q7Z3T8 1539 aa23.97■■□□□ 1.43
RFTN1-209ENST00000483671 INO80Q9ULG1 1556 aaPredicted RBP23.96■■□□□ 1.43
RFTN1-209ENST00000483671 POGZQ7Z3K3 1410 aa23.96■■□□□ 1.43
RFTN1-209ENST00000483671 KIF13AQ9H1H9 1805 aa23.95■■□□□ 1.43
RFTN1-209ENST00000483671 TEX14Q8IWB6 1497 aa23.95■■□□□ 1.42
RFTN1-209ENST00000483671 KDM5CP41229 1560 aa23.95■■□□□ 1.42
RFTN1-209ENST00000483671 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
RFTN1-209ENST00000483671 PPRC1Q5VV67 1664 aaKnown RBP23.94■■□□□ 1.42
RFTN1-209ENST00000483671 AFAP1Q8N556 730 aa23.93■■□□□ 1.42
RFTN1-209ENST00000483671 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
RFTN1-209ENST00000483671 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
RFTN1-209ENST00000483671 DENND4BO75064 1496 aaPredicted RBP23.91■■□□□ 1.42
RFTN1-209ENST00000483671 ERBINQ96RT1 1412 aa23.89■■□□□ 1.42
RFTN1-209ENST00000483671 MLH3Q9UHC1 1453 aa23.89■■□□□ 1.41
RFTN1-209ENST00000483671 KDM5DQ9BY66 1539 aa23.86■■□□□ 1.41
RFTN1-209ENST00000483671 KIDINS220Q9ULH0 1771 aa23.84■■□□□ 1.41
RFTN1-209ENST00000483671 RICTORQ6R327 1708 aa23.83■■□□□ 1.41
RFTN1-209ENST00000483671 HECW2Q9P2P5 1572 aa23.83■■□□□ 1.41
RFTN1-209ENST00000483671 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
RFTN1-209ENST00000483671 PZPP20742 1482 aa23.81■■□□□ 1.4
RFTN1-209ENST00000483671 UNC13BO14795 1591 aa23.81■■□□□ 1.4
RFTN1-209ENST00000483671 TSPOAP1O95153 1857 aa23.8■■□□□ 1.4
RFTN1-209ENST00000483671 ZMYM4Q5VZL5 1548 aa23.8■■□□□ 1.4
RFTN1-209ENST00000483671 FRMPD1Q5SYB0 1578 aa23.79■■□□□ 1.4
RFTN1-209ENST00000483671 MAGI2Q86UL8 1455 aa23.79■■□□□ 1.4
RFTN1-209ENST00000483671 MPHOSPH9Q99550 1183 aa23.79■■□□□ 1.4
RFTN1-209ENST00000483671 DHX29Q7Z478 1369 aaKnown RBP23.78■■□□□ 1.4
RFTN1-209ENST00000483671 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
RFTN1-209ENST00000483671 RAPGEF3O95398 923 aa23.75■■□□□ 1.39
RFTN1-209ENST00000483671 NUP155O75694 1391 aa23.73■■□□□ 1.39
RFTN1-209ENST00000483671 A2MP01023 1474 aa23.72■■□□□ 1.39
RFTN1-209ENST00000483671 DEPDC5O75140 1603 aa23.71■■□□□ 1.39
RFTN1-209ENST00000483671 ABCA6Q8N139 1617 aa23.71■■□□□ 1.39
RFTN1-209ENST00000483671 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
RFTN1-209ENST00000483671 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms