RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
MSL3-216ENST00000483645 PAXIP1Q6ZW49 1069 aaPredicted RBP11.16□□□□□ -0.62
MSL3-216ENST00000483645 SNPHO15079 494 aa11.15□□□□□ -0.62
MSL3-216ENST00000483645 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
MSL3-216ENST00000483645 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
MSL3-216ENST00000483645 C2orf72A6NCS6 295 aa11.06□□□□□ -0.64
MSL3-216ENST00000483645 FAM163AQ96GL9 167 aaPredicted RBP11.05□□□□□ -0.64
MSL3-216ENST00000483645 PDE4AP27815 886 aa11.04□□□□□ -0.64
MSL3-216ENST00000483645 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
MSL3-216ENST00000483645 KIF3CO14782 793 aa11.03□□□□□ -0.64
MSL3-216ENST00000483645 RIMBP2O15034 1052 aa11.03□□□□□ -0.64
MSL3-216ENST00000483645 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
MSL3-216ENST00000483645 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
MSL3-216ENST00000483645 LCE2DQ5TA82 110 aaPredicted RBP10.99□□□□□ -0.65
MSL3-216ENST00000483645 FOXK1P85037 733 aa10.98□□□□□ -0.65
MSL3-216ENST00000483645 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
MSL3-216ENST00000483645 PLCB2Q00722 1185 aa10.97□□□□□ -0.65
MSL3-216ENST00000483645 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
MSL3-216ENST00000483645 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
MSL3-216ENST00000483645 ST18O60284 1047 aa10.95□□□□□ -0.66
MSL3-216ENST00000483645 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
MSL3-216ENST00000483645 PLPP6Q8IY26 295 aa10.95□□□□□ -0.66
MSL3-216ENST00000483645 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
MSL3-216ENST00000483645 DSG2Q14126 1118 aa10.94□□□□□ -0.66
MSL3-216ENST00000483645 PPP1R15BQ5SWA1 713 aa10.94□□□□□ -0.66
MSL3-216ENST00000483645 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
MSL3-216ENST00000483645 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
MSL3-216ENST00000483645 SLC34A2O95436 690 aa10.9□□□□□ -0.66
MSL3-216ENST00000483645 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
MSL3-216ENST00000483645 MFSD10Q14728 455 aa10.89□□□□□ -0.67
MSL3-216ENST00000483645 TBC1D12O60347 775 aa10.88□□□□□ -0.67
MSL3-216ENST00000483645 TSHZ2Q9NRE2 1034 aa10.87□□□□□ -0.67
MSL3-216ENST00000483645 HOXB1P14653 301 aaPredicted RBP10.86□□□□□ -0.67
MSL3-216ENST00000483645 EMP3P54852 163 aa10.86□□□□□ -0.67
MSL3-216ENST00000483645 HAP1P54257 671 aaPredicted RBP10.85□□□□□ -0.67
MSL3-216ENST00000483645 ARSIQ5FYB1 569 aa10.85□□□□□ -0.67
MSL3-216ENST00000483645 PCDHGA4Q9Y5G9 962 aa10.84□□□□□ -0.67
MSL3-216ENST00000483645 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
MSL3-216ENST00000483645 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
MSL3-216ENST00000483645 MARVELD3Q96A59 401 aa10.83□□□□□ -0.68
MSL3-216ENST00000483645 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSL3-216ENST00000483645 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
MSL3-216ENST00000483645 ERBB3P21860 1342 aa10.79□□□□□ -0.68
MSL3-216ENST00000483645 NUDT7P0C024 238 aa10.78□□□□□ -0.68
MSL3-216ENST00000483645 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
MSL3-216ENST00000483645 OXER1Q8TDS5 423 aa10.78□□□□□ -0.68
MSL3-216ENST00000483645 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.69
MSL3-216ENST00000483645 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
MSL3-216ENST00000483645 E2F4Q16254 413 aa10.76□□□□□ -0.69
MSL3-216ENST00000483645 CAMK2BQ13554 666 aa10.75□□□□□ -0.69
MSL3-216ENST00000483645 HS3ST6Q96QI5 342 aa10.72□□□□□ -0.69
MSL3-216ENST00000483645 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
MSL3-216ENST00000483645 PSDA5PKW4 1024 aaPredicted RBP10.71□□□□□ -0.69
MSL3-216ENST00000483645 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
MSL3-216ENST00000483645 EVI5O60447 810 aa10.69□□□□□ -0.7
MSL3-216ENST00000483645 LHX6Q9UPM6 363 aa10.69□□□□□ -0.7
MSL3-216ENST00000483645 DPYSL4O14531 572 aa10.68□□□□□ -0.7
MSL3-216ENST00000483645 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
MSL3-216ENST00000483645 CDAN1Q8IWY9 1227 aa10.67□□□□□ -0.7
MSL3-216ENST00000483645 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
MSL3-216ENST00000483645 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
MSL3-216ENST00000483645 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
MSL3-216ENST00000483645 SPDYE16A6NNV3 312 aaPredicted RBP10.63□□□□□ -0.71
MSL3-216ENST00000483645 ZNF687Q8N1G0 1237 aa10.62□□□□□ -0.71
MSL3-216ENST00000483645 ANO8Q9HCE9 1232 aaPredicted RBP10.62□□□□□ -0.71
MSL3-216ENST00000483645 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
MSL3-216ENST00000483645 POTEB3A0JP26 581 aa10.61□□□□□ -0.71
MSL3-216ENST00000483645 POTEBQ6S5H4 581 aa10.61□□□□□ -0.71
MSL3-216ENST00000483645 ZNF454Q8N9F8 522 aa10.6□□□□□ -0.71
MSL3-216ENST00000483645 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
MSL3-216ENST00000483645 PDIA6Q15084 440 aa10.59□□□□□ -0.71
MSL3-216ENST00000483645 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
MSL3-216ENST00000483645 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
MSL3-216ENST00000483645 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
MSL3-216ENST00000483645 PBX2P40425 430 aa10.57□□□□□ -0.72
MSL3-216ENST00000483645 FOSBP53539 338 aa10.56□□□□□ -0.72
MSL3-216ENST00000483645 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
MSL3-216ENST00000483645 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
MSL3-216ENST00000483645 PHF14O94880 888 aa10.54□□□□□ -0.72
MSL3-216ENST00000483645 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
MSL3-216ENST00000483645 PTGER2P43116 358 aa10.53□□□□□ -0.72
MSL3-216ENST00000483645 DDX12PQ92771 950 aa10.53□□□□□ -0.72
MSL3-216ENST00000483645 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
MSL3-216ENST00000483645 EPAS1Q99814 870 aa10.53□□□□□ -0.72
MSL3-216ENST00000483645 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
MSL3-216ENST00000483645 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
MSL3-216ENST00000483645 PCDHGA10Q9Y5H3 936 aa10.5□□□□□ -0.73
MSL3-216ENST00000483645 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 PTPREP23469 700 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 NBR1Q14596 966 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 KCNK17Q96T54 332 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 BCL2L12Q9HB09 334 aa10.49□□□□□ -0.73
MSL3-216ENST00000483645 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
MSL3-216ENST00000483645 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
MSL3-216ENST00000483645 ANKRD13DQ6ZTN6 518 aa10.46□□□□□ -0.73
MSL3-216ENST00000483645 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.73
MSL3-216ENST00000483645 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
MSL3-216ENST00000483645 PSEN2P49810 448 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms