RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 RIMBP2O15034 1052 aa7.92□□□□□ -1.14
LTN1-205ENST00000483326 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
LTN1-205ENST00000483326 TMEM92Q6UXU6 159 aa7.92□□□□□ -1.14
LTN1-205ENST00000483326 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
LTN1-205ENST00000483326 MARVELD3Q96A59 401 aa7.91□□□□□ -1.14
LTN1-205ENST00000483326 DCAF8L2P0C7V8 631 aa7.9□□□□□ -1.14
LTN1-205ENST00000483326 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
LTN1-205ENST00000483326 EMP3P54852 163 aa7.9□□□□□ -1.14
LTN1-205ENST00000483326 DNAJC5Q9H3Z4 198 aa7.9□□□□□ -1.14
LTN1-205ENST00000483326 RYDENQ9NUL5 291 aaKnown RBP7.89□□□□□ -1.15
LTN1-205ENST00000483326 ZSWIM6Q9HCJ5 1215 aa7.89□□□□□ -1.15
LTN1-205ENST00000483326 HOXB1P14653 301 aaPredicted RBP7.88□□□□□ -1.15
LTN1-205ENST00000483326 PPP1R37O75864 691 aa7.86□□□□□ -1.15
LTN1-205ENST00000483326 TMC2Q8TDI7 906 aa7.85□□□□□ -1.15
LTN1-205ENST00000483326 C2orf72A6NCS6 295 aa7.84□□□□□ -1.15
LTN1-205ENST00000483326 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
LTN1-205ENST00000483326 KIF3CO14782 793 aa7.84□□□□□ -1.15
LTN1-205ENST00000483326 HS3ST6Q96QI5 342 aa7.83□□□□□ -1.16
LTN1-205ENST00000483326 DAXXQ9UER7 740 aaPredicted RBP7.82□□□□□ -1.16
LTN1-205ENST00000483326 HAP1P54257 671 aaPredicted RBP7.82□□□□□ -1.16
LTN1-205ENST00000483326 NKX1-1Q15270 411 aaPredicted RBP7.82□□□□□ -1.16
LTN1-205ENST00000483326 ERBB3P21860 1342 aa7.81□□□□□ -1.16
LTN1-205ENST00000483326 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
LTN1-205ENST00000483326 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
LTN1-205ENST00000483326 SLC34A2O95436 690 aa7.77□□□□□ -1.17
LTN1-205ENST00000483326 ARSIQ5FYB1 569 aa7.77□□□□□ -1.17
LTN1-205ENST00000483326 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
LTN1-205ENST00000483326 GPHNQ9NQX3 736 aaPredicted RBP7.76□□□□□ -1.17
LTN1-205ENST00000483326 VSIG10Q8N0Z9 540 aa7.75□□□□□ -1.17
LTN1-205ENST00000483326 FOXK1P85037 733 aa7.74□□□□□ -1.17
LTN1-205ENST00000483326 VARS2Q5ST30 1063 aaKnown RBP7.74□□□□□ -1.17
LTN1-205ENST00000483326 GTPBP6O43824 516 aaPredicted RBP7.74□□□□□ -1.17
LTN1-205ENST00000483326 TPRNQ4KMQ1 711 aa7.73□□□□□ -1.17
LTN1-205ENST00000483326 PCDHGA4Q9Y5G9 962 aa7.73□□□□□ -1.17
LTN1-205ENST00000483326 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
LTN1-205ENST00000483326 PLPP6Q8IY26 295 aa7.72□□□□□ -1.17
LTN1-205ENST00000483326 SPNS2Q8IVW8 549 aa7.71□□□□□ -1.17
LTN1-205ENST00000483326 ZNF687Q8N1G0 1237 aa7.71□□□□□ -1.17
LTN1-205ENST00000483326 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
LTN1-205ENST00000483326 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.17
LTN1-205ENST00000483326 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.185e-7■□□□□ 10.9
LTN1-205ENST00000483326 PDE4AP27815 886 aa7.7□□□□□ -1.18
LTN1-205ENST00000483326 ARXQ96QS3 562 aa7.7□□□□□ -1.18
LTN1-205ENST00000483326 TBC1D12O60347 775 aa7.69□□□□□ -1.18
LTN1-205ENST00000483326 NUDT7P0C024 238 aa7.69□□□□□ -1.18
LTN1-205ENST00000483326 DSG2Q14126 1118 aa7.69□□□□□ -1.18
LTN1-205ENST00000483326 PTCD2Q8WV60 388 aaKnown RBP7.69□□□□□ -1.18
LTN1-205ENST00000483326 CRISPLD2Q9H0B8 497 aa7.69□□□□□ -1.18
LTN1-205ENST00000483326 BBXQ8WY36 941 aaPredicted RBP7.67□□□□□ -1.18
LTN1-205ENST00000483326 PSDA5PKW4 1024 aaPredicted RBP7.66□□□□□ -1.18
LTN1-205ENST00000483326 MMRN1Q13201 1228 aa7.66□□□□□ -1.18
LTN1-205ENST00000483326 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
LTN1-205ENST00000483326 PPP1R15BQ5SWA1 713 aa7.65□□□□□ -1.18
LTN1-205ENST00000483326 PBX2P40425 430 aa7.64□□□□□ -1.19
LTN1-205ENST00000483326 NCKAP5LQ9HCH0 1330 aa7.63□□□□□ -1.19
LTN1-205ENST00000483326 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
LTN1-205ENST00000483326 LARP6Q9BRS8 491 aaKnown RBP7.62□□□□□ -1.19
LTN1-205ENST00000483326 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
LTN1-205ENST00000483326 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
LTN1-205ENST00000483326 OXER1Q8TDS5 423 aa7.61□□□□□ -1.19
LTN1-205ENST00000483326 DDX27Q96GQ7 796 aaKnown RBP7.61□□□□□ -1.19
LTN1-205ENST00000483326 MFSD10Q14728 455 aa7.6□□□□□ -1.19
LTN1-205ENST00000483326 PTGER2P43116 358 aa7.59□□□□□ -1.19
LTN1-205ENST00000483326 ERICH6Q7L0X2 663 aa7.59□□□□□ -1.2
LTN1-205ENST00000483326 SPRYD3Q8NCJ5 442 aa7.59□□□□□ -1.2
LTN1-205ENST00000483326 UPF1Q92900 1129 aaKnown RBP eCLIP7.59□□□□□ -1.2
LTN1-205ENST00000483326 LSM11P83369 360 aaKnown RBP eCLIP7.58□□□□□ -1.2
LTN1-205ENST00000483326 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
LTN1-205ENST00000483326 ANKRD13DQ6ZTN6 518 aa7.58□□□□□ -1.2
LTN1-205ENST00000483326 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
LTN1-205ENST00000483326 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
LTN1-205ENST00000483326 CADPS2Q86UW7 1296 aa7.55□□□□□ -1.2
LTN1-205ENST00000483326 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
LTN1-205ENST00000483326 MAP3K9P80192 1104 aa7.54□□□□□ -1.2
LTN1-205ENST00000483326 KCNH8Q96L42 1107 aa7.54□□□□□ -1.2
LTN1-205ENST00000483326 MYT1LQ9UL68 1186 aa7.54□□□□□ -1.2
LTN1-205ENST00000483326 PAXIP1Q6ZW49 1069 aaPredicted RBP7.54□□□□□ -1.2
LTN1-205ENST00000483326 POTEEQ6S8J3 1075 aa7.53□□□□□ -1.2
LTN1-205ENST00000483326 RNF166Q96A37 237 aaPredicted RBP7.53□□□□□ -1.2
LTN1-205ENST00000483326 ANO8Q9HCE9 1232 aaPredicted RBP7.53□□□□□ -1.2
LTN1-205ENST00000483326 AXIN2Q9Y2T1 843 aa7.53□□□□□ -1.2
LTN1-205ENST00000483326 EVI5O60447 810 aa7.52□□□□□ -1.21
LTN1-205ENST00000483326 KDM2AQ9Y2K7 1162 aa7.52□□□□□ -1.21
LTN1-205ENST00000483326 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
LTN1-205ENST00000483326 TK2O00142 265 aa7.5□□□□□ -1.21
LTN1-205ENST00000483326 GTF3C3Q9Y5Q9 886 aa7.5□□□□□ -1.21
LTN1-205ENST00000483326 FOSBP53539 338 aa7.49□□□□□ -1.21
LTN1-205ENST00000483326 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
LTN1-205ENST00000483326 CAMK2BQ13554 666 aa7.48□□□□□ -1.21
LTN1-205ENST00000483326 ADGRD1Q6QNK2 874 aa7.48□□□□□ -1.21
LTN1-205ENST00000483326 JPH4Q96JJ6 628 aa7.48□□□□□ -1.21
LTN1-205ENST00000483326 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
LTN1-205ENST00000483326 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
LTN1-205ENST00000483326 PSEN2P49810 448 aa7.47□□□□□ -1.21
LTN1-205ENST00000483326 HOMEZQ8IX15 550 aa7.47□□□□□ -1.21
LTN1-205ENST00000483326 DMRTA1Q5VZB9 504 aa7.46□□□□□ -1.21
LTN1-205ENST00000483326 PTPREP23469 700 aa7.46□□□□□ -1.22
LTN1-205ENST00000483326 ZDHHC16Q969W1 377 aa7.46□□□□□ -1.22
LTN1-205ENST00000483326 STAC3Q96MF2 364 aa7.45□□□□□ -1.22
LTN1-205ENST00000483326 SLC4A5Q9BY07 1137 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms