RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 PREX2Q70Z35 1606 aa19.64■□□□□ 0.73
HDLBP-239ENST00000483086 ADAMTSL3P82987 1691 aa19.63■□□□□ 0.73
HDLBP-239ENST00000483086 LOC105371045A0A1W2PR82 267 aa19.63■□□□□ 0.73
HDLBP-239ENST00000483086 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
HDLBP-239ENST00000483086 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
HDLBP-239ENST00000483086 POGZQ7Z3K3 1410 aa19.61■□□□□ 0.73
HDLBP-239ENST00000483086 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
HDLBP-239ENST00000483086 YEATS2Q9ULM3 1422 aa19.61■□□□□ 0.73
HDLBP-239ENST00000483086 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
HDLBP-239ENST00000483086 ZFYVE16Q7Z3T8 1539 aa19.57■□□□□ 0.72
HDLBP-239ENST00000483086 ARHGEF12Q9NZN5 1544 aa19.57■□□□□ 0.72
HDLBP-239ENST00000483086 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
HDLBP-239ENST00000483086 MADDQ8WXG6 1647 aa19.55■□□□□ 0.72
HDLBP-239ENST00000483086 KDM5CP41229 1560 aa19.55■□□□□ 0.72
HDLBP-239ENST00000483086 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
HDLBP-239ENST00000483086 ABCC1P33527 1531 aa19.54■□□□□ 0.72
HDLBP-239ENST00000483086 SAMD9LQ8IVG5 1584 aa19.52■□□□□ 0.71
HDLBP-239ENST00000483086 MAGI2Q86UL8 1455 aa19.51■□□□□ 0.71
HDLBP-239ENST00000483086 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
HDLBP-239ENST00000483086 TRAPPC8Q9Y2L5 1435 aa19.5■□□□□ 0.71
HDLBP-239ENST00000483086 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
HDLBP-239ENST00000483086 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
HDLBP-239ENST00000483086 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
HDLBP-239ENST00000483086 PTPRMP28827 1452 aa19.48■□□□□ 0.71
HDLBP-239ENST00000483086 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
HDLBP-239ENST00000483086 DIP2CQ9Y2E4 1556 aa19.48■□□□□ 0.71
HDLBP-239ENST00000483086 ZNF518AQ6AHZ1 1483 aa19.48■□□□□ 0.71
HDLBP-239ENST00000483086 TIAM1Q13009 1591 aa19.47■□□□□ 0.71
HDLBP-239ENST00000483086 KIDINS220Q9ULH0 1771 aa19.46■□□□□ 0.71
HDLBP-239ENST00000483086 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
HDLBP-239ENST00000483086 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
HDLBP-239ENST00000483086 SYCP2Q9BX26 1530 aa19.44■□□□□ 0.7
HDLBP-239ENST00000483086 ATP10AO60312 1499 aa19.43■□□□□ 0.7
HDLBP-239ENST00000483086 FER1L4A9Z1Z3 1794 aa19.43■□□□□ 0.7
HDLBP-239ENST00000483086 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
HDLBP-239ENST00000483086 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
HDLBP-239ENST00000483086 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
HDLBP-239ENST00000483086 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
HDLBP-239ENST00000483086 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
HDLBP-239ENST00000483086 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
HDLBP-239ENST00000483086 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
HDLBP-239ENST00000483086 MLECQ14165 292 aa19.37■□□□□ 0.69
HDLBP-239ENST00000483086 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
HDLBP-239ENST00000483086 ZNF644Q9H582 1327 aaPredicted RBP19.36■□□□□ 0.69
HDLBP-239ENST00000483086 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.69
HDLBP-239ENST00000483086 INO80Q9ULG1 1556 aaPredicted RBP19.35■□□□□ 0.69
HDLBP-239ENST00000483086 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
HDLBP-239ENST00000483086 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
HDLBP-239ENST00000483086 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
HDLBP-239ENST00000483086 MBD5Q9P267 1494 aa19.32■□□□□ 0.68
HDLBP-239ENST00000483086 KIAA1107Q9UPP5 1409 aa19.32■□□□□ 0.68
HDLBP-239ENST00000483086 ATP7AQ04656 1500 aa19.3■□□□□ 0.68
HDLBP-239ENST00000483086 LMTK3Q96Q04 1460 aa19.3■□□□□ 0.68
HDLBP-239ENST00000483086 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
HDLBP-239ENST00000483086 AGLP35573 1532 aa19.3■□□□□ 0.68
HDLBP-239ENST00000483086 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
HDLBP-239ENST00000483086 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
HDLBP-239ENST00000483086 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.68
HDLBP-239ENST00000483086 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.68
HDLBP-239ENST00000483086 MAP3K1Q13233 1512 aa19.26■□□□□ 0.67
HDLBP-239ENST00000483086 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
HDLBP-239ENST00000483086 C3P01024 1663 aa19.26■□□□□ 0.67
HDLBP-239ENST00000483086 ADGBQ8N7X0 1667 aa19.26■□□□□ 0.67
HDLBP-239ENST00000483086 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
HDLBP-239ENST00000483086 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
HDLBP-239ENST00000483086 A2MP01023 1474 aa19.19■□□□□ 0.66
HDLBP-239ENST00000483086 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
HDLBP-239ENST00000483086 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
HDLBP-239ENST00000483086 CCDC141Q6ZP82 1450 aa19.17■□□□□ 0.66
HDLBP-239ENST00000483086 HSPA2P54652 639 aa19.16■□□□□ 0.66
HDLBP-239ENST00000483086 CLTCQ00610 1675 aaKnown RBP19.16■□□□□ 0.66
HDLBP-239ENST00000483086 MROH2AA6NES4 1674 aa19.15■□□□□ 0.66
HDLBP-239ENST00000483086 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
HDLBP-239ENST00000483086 SETD1BQ9UPS6 1966 aaKnown RBP19.13■□□□□ 0.65
HDLBP-239ENST00000483086 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
HDLBP-239ENST00000483086 STRCQ7RTU9 1775 aa19.1■□□□□ 0.65
HDLBP-239ENST00000483086 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
HDLBP-239ENST00000483086 MIA2Q96PC5 1412 aa19.08■□□□□ 0.64
HDLBP-239ENST00000483086 CROCC2H7BZ55 1655 aa19.08■□□□□ 0.64
HDLBP-239ENST00000483086 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
HDLBP-239ENST00000483086 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
HDLBP-239ENST00000483086 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
HDLBP-239ENST00000483086 ZMYM3Q14202 1370 aa19.05■□□□□ 0.64
HDLBP-239ENST00000483086 GGT6Q6P531 493 aa19.04■□□□□ 0.64
HDLBP-239ENST00000483086 UHRF1BP1Q6BDS2 1440 aa19.01■□□□□ 0.63
HDLBP-239ENST00000483086 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
HDLBP-239ENST00000483086 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
HDLBP-239ENST00000483086 ABCC5O15440 1437 aa19■□□□□ 0.63
HDLBP-239ENST00000483086 PTPRKQ15262 1439 aa19■□□□□ 0.63
HDLBP-239ENST00000483086 FGD6Q6ZV73 1430 aa19■□□□□ 0.63
HDLBP-239ENST00000483086 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
HDLBP-239ENST00000483086 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
HDLBP-239ENST00000483086 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
HDLBP-239ENST00000483086 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
HDLBP-239ENST00000483086 ILDR1Q86SU0 546 aaPredicted RBP18.99■□□□□ 0.63
HDLBP-239ENST00000483086 ESF1Q9H501 851 aaKnown RBP18.99■□□□□ 0.63
HDLBP-239ENST00000483086 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
HDLBP-239ENST00000483086 KIF3BO15066 747 aa18.98■□□□□ 0.63
HDLBP-239ENST00000483086 NPATQ14207 1427 aa18.98■□□□□ 0.63
HDLBP-239ENST00000483086 EIF2AK4Q9P2K8 1649 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms