RNA–Protein interactions for RNA: ENST00000483053.1

CTPS2-205, Transcript of CTP synthase 2, humanhuman

TSL 1 (best)

Gene CTPS2, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-205ENST00000483053 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
CTPS2-205ENST00000483053 POTEB3A0JP26 581 aa7.9□□□□□ -1.14
CTPS2-205ENST00000483053 POTEBQ6S5H4 581 aa7.9□□□□□ -1.14
CTPS2-205ENST00000483053 CHGAP10645 457 aaKnown RBP7.89□□□□□ -1.15
CTPS2-205ENST00000483053 RNF166Q96A37 237 aaPredicted RBP7.88□□□□□ -1.15
CTPS2-205ENST00000483053 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
CTPS2-205ENST00000483053 ERBB3P21860 1342 aa7.87□□□□□ -1.15
CTPS2-205ENST00000483053 HOXB3P14651 431 aaPredicted RBP7.87□□□□□ -1.15
CTPS2-205ENST00000483053 PTGER2P43116 358 aa7.86□□□□□ -1.15
CTPS2-205ENST00000483053 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
CTPS2-205ENST00000483053 CABP2Q9NPB3 220 aa7.85□□□□□ -1.15
CTPS2-205ENST00000483053 DPY19L2Q6NUT2 758 aa7.84□□□□□ -1.15
CTPS2-205ENST00000483053 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
CTPS2-205ENST00000483053 DNAJC5Q9H3Z4 198 aa7.82□□□□□ -1.16
CTPS2-205ENST00000483053 MYT1LQ9UL68 1186 aa7.8□□□□□ -1.16
CTPS2-205ENST00000483053 HS6ST3Q8IZP7 471 aa7.79□□□□□ -1.16
CTPS2-205ENST00000483053 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
CTPS2-205ENST00000483053 RNF25Q96BH1 459 aaPredicted RBP7.78□□□□□ -1.16
CTPS2-205ENST00000483053 VARS2Q5ST30 1063 aaKnown RBP7.77□□□□□ -1.17
CTPS2-205ENST00000483053 SOX12O15370 315 aa7.74□□□□□ -1.17
CTPS2-205ENST00000483053 NKX1-1Q15270 411 aaPredicted RBP7.74□□□□□ -1.17
CTPS2-205ENST00000483053 NBR1Q14596 966 aa7.73□□□□□ -1.17
CTPS2-205ENST00000483053 GPR153Q6NV75 609 aa7.71□□□□□ -1.18
CTPS2-205ENST00000483053 MICALL2Q8IY33 904 aa7.71□□□□□ -1.18
CTPS2-205ENST00000483053 EFCAB3Q8N7B9 438 aa7.71□□□□□ -1.18
CTPS2-205ENST00000483053 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
CTPS2-205ENST00000483053 RIOK3O14730 519 aaKnown RBP7.66□□□□□ -1.18
CTPS2-205ENST00000483053 ZNF316A6NFI3 1004 aaPredicted RBP7.64□□□□□ -1.19
CTPS2-205ENST00000483053 PBX2P40425 430 aa7.64□□□□□ -1.19
CTPS2-205ENST00000483053 TMEM92Q6UXU6 159 aa7.64□□□□□ -1.19
CTPS2-205ENST00000483053 ANKRD13DQ6ZTN6 518 aa7.64□□□□□ -1.19
CTPS2-205ENST00000483053 STK25O00506 426 aa7.62□□□□□ -1.19
CTPS2-205ENST00000483053 LSM11P83369 360 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTPS2-205ENST00000483053 ARSIQ5FYB1 569 aa7.62□□□□□ -1.19
CTPS2-205ENST00000483053 VGFO15240 615 aaPredicted RBP7.61□□□□□ -1.19
CTPS2-205ENST00000483053 TIMELESSQ9UNS1 1208 aa7.61□□□□□ -1.19
CTPS2-205ENST00000483053 NLRP6P59044 892 aa7.59□□□□□ -1.19
CTPS2-205ENST00000483053 TULP1O00294 542 aaPredicted RBP7.58□□□□□ -1.2
CTPS2-205ENST00000483053 HCSTQ9UBK5 93 aa7.58□□□□□ -1.2
CTPS2-205ENST00000483053 MS4A4AQ96JQ5 239 aa7.57□□□□□ -1.2
CTPS2-205ENST00000483053 GTF3C3Q9Y5Q9 886 aa7.57□□□□□ -1.2
CTPS2-205ENST00000483053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
CTPS2-205ENST00000483053 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
CTPS2-205ENST00000483053 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
CTPS2-205ENST00000483053 PHF8Q9UPP1 1060 aa7.56□□□□□ -1.2
CTPS2-205ENST00000483053 PSDA5PKW4 1024 aaPredicted RBP7.55□□□□□ -1.2
CTPS2-205ENST00000483053 BCL11BQ9C0K0 894 aaPredicted RBP7.55□□□□□ -1.2
CTPS2-205ENST00000483053 STK24Q9Y6E0 443 aa7.55□□□□□ -1.2
CTPS2-205ENST00000483053 SLC34A2O95436 690 aa7.54□□□□□ -1.2
CTPS2-205ENST00000483053 KIF3CO14782 793 aa7.5□□□□□ -1.21
CTPS2-205ENST00000483053 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTPS2-205ENST00000483053 TK2O00142 265 aa7.48□□□□□ -1.21
CTPS2-205ENST00000483053 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
CTPS2-205ENST00000483053 NUDT7P0C024 238 aa7.48□□□□□ -1.21
CTPS2-205ENST00000483053 CADPS2Q86UW7 1296 aa7.48□□□□□ -1.21
CTPS2-205ENST00000483053 FBXO22Q8NEZ5 403 aa7.48□□□□□ -1.21
CTPS2-205ENST00000483053 RYDENQ9NUL5 291 aaKnown RBP7.48□□□□□ -1.21
CTPS2-205ENST00000483053 TMEM132AQ24JP5 1023 aa7.47□□□□□ -1.21
CTPS2-205ENST00000483053 LHX6Q9UPM6 363 aa7.47□□□□□ -1.21
CTPS2-205ENST00000483053 PCDHGA4Q9Y5G9 962 aa7.47□□□□□ -1.21
CTPS2-205ENST00000483053 C2orf72A6NCS6 295 aa7.46□□□□□ -1.22
CTPS2-205ENST00000483053 ADGRD1Q6QNK2 874 aa7.46□□□□□ -1.22
CTPS2-205ENST00000483053 RGS20O76081 388 aa7.45□□□□□ -1.22
CTPS2-205ENST00000483053 TMC2Q8TDI7 906 aa7.45□□□□□ -1.22
CTPS2-205ENST00000483053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTPS2-205ENST00000483053 P3H3Q8IVL6 736 aa7.44□□□□□ -1.22
CTPS2-205ENST00000483053 KCNV2Q8TDN2 545 aa7.44□□□□□ -1.22
CTPS2-205ENST00000483053 STAC3Q96MF2 364 aa7.43□□□□□ -1.22
CTPS2-205ENST00000483053 POTEEQ6S8J3 1075 aa7.42□□□□□ -1.22
CTPS2-205ENST00000483053 AXIN2Q9Y2T1 843 aa7.42□□□□□ -1.22
CTPS2-205ENST00000483053 LMOD2Q6P5Q4 547 aa7.41□□□□□ -1.22
CTPS2-205ENST00000483053 MFRPQ9BY79 579 aa7.41□□□□□ -1.22
CTPS2-205ENST00000483053 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
CTPS2-205ENST00000483053 KCNH8Q96L42 1107 aa7.4□□□□□ -1.22
CTPS2-205ENST00000483053 IRX2Q9BZI1 471 aaPredicted RBP7.4□□□□□ -1.22
CTPS2-205ENST00000483053 HRO43593 1189 aa7.39□□□□□ -1.23
CTPS2-205ENST00000483053 TBC1D12O60347 775 aa7.38□□□□□ -1.23
CTPS2-205ENST00000483053 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
CTPS2-205ENST00000483053 PTCD2Q8WV60 388 aaKnown RBP7.38□□□□□ -1.23
CTPS2-205ENST00000483053 PPP4R3BQ5MIZ7 849 aa7.37□□□□□ -1.23
CTPS2-205ENST00000483053 ERICH6Q7L0X2 663 aa7.37□□□□□ -1.23
CTPS2-205ENST00000483053 KDM4FA0A1W2PPD8 638 aa7.34□□□□□ -1.23
CTPS2-205ENST00000483053 BRPF1P55201 1214 aaPredicted RBP7.34□□□□□ -1.23
CTPS2-205ENST00000483053 PPP1R37O75864 691 aa7.33□□□□□ -1.24
CTPS2-205ENST00000483053 KCTD12Q96CX2 325 aaKnown RBP7.33□□□□□ -1.24
CTPS2-205ENST00000483053 ARXQ96QS3 562 aa7.33□□□□□ -1.24
CTPS2-205ENST00000483053 FOXK1P85037 733 aa7.31□□□□□ -1.24
CTPS2-205ENST00000483053 C14orf37Q86TY3 774 aa7.31□□□□□ -1.24
CTPS2-205ENST00000483053 ZC3H15Q8WU90 426 aaKnown RBP7.31□□□□□ -1.24
CTPS2-205ENST00000483053 ARHGEF1Q92888 912 aaKnown RBP7.31□□□□□ -1.24
CTPS2-205ENST00000483053 DMRTA1Q5VZB9 504 aa7.3□□□□□ -1.24
CTPS2-205ENST00000483053 SLC4A5Q9BY07 1137 aa7.3□□□□□ -1.24
CTPS2-205ENST00000483053 PSEN2P49810 448 aa7.29□□□□□ -1.24
CTPS2-205ENST00000483053 SEMA3EO15041 775 aa7.28□□□□□ -1.24
CTPS2-205ENST00000483053 E2F4Q16254 413 aa7.27□□□□□ -1.25
CTPS2-205ENST00000483053 SLC24A3Q9HC58 644 aa7.27□□□□□ -1.25
CTPS2-205ENST00000483053 GPHNQ9NQX3 736 aaPredicted RBP7.27□□□□□ -1.25
CTPS2-205ENST00000483053 TESPA1A2RU30 521 aaPredicted RBP7.26□□□□□ -1.25
CTPS2-205ENST00000483053 PLPP6Q8IY26 295 aa7.26□□□□□ -1.25
CTPS2-205ENST00000483053 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms