RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
RPA3-207ENST00000483031 NLRP6P59044 892 aa11.74□□□□□ -0.53
RPA3-207ENST00000483031 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
RPA3-207ENST00000483031 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
RPA3-207ENST00000483031 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
RPA3-207ENST00000483031 GPR153Q6NV75 609 aa11.67□□□□□ -0.54
RPA3-207ENST00000483031 FBXO22Q8NEZ5 403 aa11.67□□□□□ -0.54
RPA3-207ENST00000483031 STK25O00506 426 aa11.64□□□□□ -0.55
RPA3-207ENST00000483031 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
RPA3-207ENST00000483031 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
RPA3-207ENST00000483031 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
RPA3-207ENST00000483031 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
RPA3-207ENST00000483031 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
RPA3-207ENST00000483031 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
RPA3-207ENST00000483031 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
RPA3-207ENST00000483031 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPA3-207ENST00000483031 C2orf72A6NCS6 295 aa11.53□□□□□ -0.56
RPA3-207ENST00000483031 KIF3CO14782 793 aa11.53□□□□□ -0.56
RPA3-207ENST00000483031 RGL2O15211 777 aa11.52□□□□□ -0.57
RPA3-207ENST00000483031 PTGER2P43116 358 aa11.51□□□□□ -0.57
RPA3-207ENST00000483031 PKD2Q13563 968 aa11.51□□□□□ -0.57
RPA3-207ENST00000483031 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
RPA3-207ENST00000483031 ANKRD13DQ6ZTN6 518 aa11.47□□□□□ -0.57
RPA3-207ENST00000483031 NUDT7P0C024 238 aa11.46□□□□□ -0.57
RPA3-207ENST00000483031 SLC34A2O95436 690 aa11.45□□□□□ -0.58
RPA3-207ENST00000483031 PCDHGA4Q9Y5G9 962 aa11.44□□□□□ -0.58
RPA3-207ENST00000483031 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
RPA3-207ENST00000483031 PBX2P40425 430 aa11.42□□□□□ -0.58
RPA3-207ENST00000483031 LHX6Q9UPM6 363 aa11.41□□□□□ -0.58
RPA3-207ENST00000483031 PPP1R37O75864 691 aa11.39□□□□□ -0.59
RPA3-207ENST00000483031 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
RPA3-207ENST00000483031 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
RPA3-207ENST00000483031 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
RPA3-207ENST00000483031 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
RPA3-207ENST00000483031 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
RPA3-207ENST00000483031 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
RPA3-207ENST00000483031 FOXK1P85037 733 aa11.28□□□□□ -0.6
RPA3-207ENST00000483031 PLPP6Q8IY26 295 aa11.27□□□□□ -0.61
RPA3-207ENST00000483031 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
RPA3-207ENST00000483031 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
RPA3-207ENST00000483031 ADGRD1Q6QNK2 874 aa11.25□□□□□ -0.61
RPA3-207ENST00000483031 TBC1D12O60347 775 aa11.24□□□□□ -0.61
RPA3-207ENST00000483031 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
RPA3-207ENST00000483031 DSG2Q14126 1118 aa11.22□□□□□ -0.61
RPA3-207ENST00000483031 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
RPA3-207ENST00000483031 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
RPA3-207ENST00000483031 TK2O00142 265 aa11.2□□□□□ -0.62
RPA3-207ENST00000483031 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
RPA3-207ENST00000483031 PSEN2P49810 448 aa11.17□□□□□ -0.62
RPA3-207ENST00000483031 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
RPA3-207ENST00000483031 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
RPA3-207ENST00000483031 DNAJC5Q9H3Z4 198 aa11.15□□□□□ -0.62
RPA3-207ENST00000483031 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
RPA3-207ENST00000483031 HRO43593 1189 aa11.14□□□□□ -0.63
RPA3-207ENST00000483031 STAC3Q96MF2 364 aa11.13□□□□□ -0.63
RPA3-207ENST00000483031 NKX1-1Q15270 411 aaPredicted RBP11.12□□□□□ -0.63
RPA3-207ENST00000483031 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
RPA3-207ENST00000483031 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
RPA3-207ENST00000483031 UPF1Q92900 1129 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPA3-207ENST00000483031 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
RPA3-207ENST00000483031 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
RPA3-207ENST00000483031 ZNF454Q8N9F8 522 aa11.07□□□□□ -0.64
RPA3-207ENST00000483031 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
RPA3-207ENST00000483031 PDE4AP27815 886 aa11.04□□□□□ -0.64
RPA3-207ENST00000483031 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
RPA3-207ENST00000483031 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
RPA3-207ENST00000483031 NCKAP5LQ9HCH0 1330 aa11.01□□□□□ -0.65
RPA3-207ENST00000483031 FOSBP53539 338 aa11□□□□□ -0.65
RPA3-207ENST00000483031 SLC4A5Q9BY07 1137 aa11□□□□□ -0.65
RPA3-207ENST00000483031 PTPREP23469 700 aa10.99□□□□□ -0.65
RPA3-207ENST00000483031 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
RPA3-207ENST00000483031 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
RPA3-207ENST00000483031 EVI5O60447 810 aa10.96□□□□□ -0.65
RPA3-207ENST00000483031 DDX27Q96GQ7 796 aaKnown RBP10.96□□□□□ -0.65
RPA3-207ENST00000483031 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
RPA3-207ENST00000483031 PTPN5P54829 565 aa10.95□□□□□ -0.66
RPA3-207ENST00000483031 LARP6Q9BRS8 491 aaKnown RBP10.95□□□□□ -0.66
RPA3-207ENST00000483031 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
RPA3-207ENST00000483031 GOLGA8CPA6NN73 597 aa10.93□□□□□ -0.66
RPA3-207ENST00000483031 ZBED2Q9BTP6 218 aa10.93□□□□□ -0.66
RPA3-207ENST00000483031 BHMG1C9JSJ3 638 aaPredicted RBP10.92□□□□□ -0.66
RPA3-207ENST00000483031 MAP3K9P80192 1104 aa10.92□□□□□ -0.66
RPA3-207ENST00000483031 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
RPA3-207ENST00000483031 THSD4Q6ZMP0 1018 aa10.9□□□□□ -0.66
RPA3-207ENST00000483031 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
RPA3-207ENST00000483031 MFSD10Q14728 455 aa10.89□□□□□ -0.67
RPA3-207ENST00000483031 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
RPA3-207ENST00000483031 WNT2BQ93097 391 aa10.88□□□□□ -0.67
RPA3-207ENST00000483031 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
RPA3-207ENST00000483031 IFFO2Q5TF58 517 aa10.84□□□□□ -0.67
RPA3-207ENST00000483031 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
RPA3-207ENST00000483031 PPP1R3GB7ZBB8 358 aa10.83□□□□□ -0.68
RPA3-207ENST00000483031 PCDHGA10Q9Y5H3 936 aa10.82□□□□□ -0.68
RPA3-207ENST00000483031 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
RPA3-207ENST00000483031 RGS20O76081 388 aa10.8□□□□□ -0.68
RPA3-207ENST00000483031 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
RPA3-207ENST00000483031 RABGEF1Q9UJ41 708 aa10.79□□□□□ -0.68
RPA3-207ENST00000483031 PHF14O94880 888 aa10.78□□□□□ -0.68
RPA3-207ENST00000483031 PROX2Q3B8N5 592 aa10.77□□□□□ -0.69
RPA3-207ENST00000483031 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms