RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 CEP162Q5TB80 1403 aa36.56■■■■□ 3.44
CYTH3-208ENST00000482460 POGZQ7Z3K3 1410 aa36.56■■■■□ 3.44
CYTH3-208ENST00000482460 MAGI2Q86UL8 1455 aa36.55■■■■□ 3.44
CYTH3-208ENST00000482460 CDC42BPBQ9Y5S2 1711 aa36.53■■■■□ 3.44
CYTH3-208ENST00000482460 ARID4BQ4LE39 1312 aaPredicted RBP36.53■■■■□ 3.44
CYTH3-208ENST00000482460 ZFYVE16Q7Z3T8 1539 aa36.5■■■■□ 3.43
CYTH3-208ENST00000482460 ADAMTSL3P82987 1691 aa36.49■■■■□ 3.43
CYTH3-208ENST00000482460 YEATS2Q9ULM3 1422 aa36.49■■■■□ 3.43
CYTH3-208ENST00000482460 PREX2Q70Z35 1606 aa36.47■■■■□ 3.43
CYTH3-208ENST00000482460 BCORL1Q5H9F3 1711 aa36.47■■■■□ 3.43
CYTH3-208ENST00000482460 LOC105371045A0A1W2PR82 267 aa36.44■■■■□ 3.42
CYTH3-208ENST00000482460 ZNF518AQ6AHZ1 1483 aa36.43■■■■□ 3.42
CYTH3-208ENST00000482460 CDC42BPAQ5VT25 1732 aa36.41■■■■□ 3.42
CYTH3-208ENST00000482460 AFAP1Q8N556 730 aa36.39■■■■□ 3.42
CYTH3-208ENST00000482460 MTUS2Q5JR59 1369 aa36.36■■■■□ 3.41
CYTH3-208ENST00000482460 PTPRMP28827 1452 aa36.36■■■■□ 3.41
CYTH3-208ENST00000482460 KDM5CP41229 1560 aa36.36■■■■□ 3.41
CYTH3-208ENST00000482460 ATP10AO60312 1499 aa36.35■■■■□ 3.41
CYTH3-208ENST00000482460 SIGLEC1Q9BZZ2 1709 aa36.33■■■■□ 3.41
CYTH3-208ENST00000482460 MADDQ8WXG6 1647 aa36.33■■■■□ 3.41
CYTH3-208ENST00000482460 ABCC1P33527 1531 aa36.33■■■■□ 3.41
CYTH3-208ENST00000482460 GPATCH8Q9UKJ3 1502 aaKnown RBP36.32■■■■□ 3.4
CYTH3-208ENST00000482460 ARHGEF12Q9NZN5 1544 aa36.3■■■■□ 3.4
CYTH3-208ENST00000482460 C9orf84Q5VXU9 1444 aa36.29■■■■□ 3.4
CYTH3-208ENST00000482460 HECW2Q9P2P5 1572 aa36.28■■■■□ 3.4
CYTH3-208ENST00000482460 TRAPPC8Q9Y2L5 1435 aa36.28■■■■□ 3.4
CYTH3-208ENST00000482460 MYT1LQ9UL68 1186 aa36.28■■■■□ 3.4
CYTH3-208ENST00000482460 ITSN2Q9NZM3 1697 aa36.28■■■■□ 3.4
CYTH3-208ENST00000482460 ZNF777Q9ULD5 760 aaPredicted RBP36.27■■■■□ 3.4
CYTH3-208ENST00000482460 CCNB3Q8WWL7 1395 aa36.26■■■■□ 3.39
CYTH3-208ENST00000482460 MLH3Q9UHC1 1453 aa36.24■■■■□ 3.39
CYTH3-208ENST00000482460 EHBP1L1Q8N3D4 1523 aa36.24■■■■□ 3.39
CYTH3-208ENST00000482460 CFDP1Q9UEE9 299 aaPredicted RBP36.22■■■■□ 3.39
CYTH3-208ENST00000482460 SAMD9LQ8IVG5 1584 aa36.22■■■■□ 3.39
CYTH3-208ENST00000482460 RIMS1Q86UR5 1692 aaKnown RBP36.22■■■■□ 3.39
CYTH3-208ENST00000482460 MLECQ14165 292 aa36.21■■■■□ 3.39
CYTH3-208ENST00000482460 DIP2CQ9Y2E4 1556 aa36.18■■■■□ 3.38
CYTH3-208ENST00000482460 VPS8Q8N3P4 1428 aa36.17■■■■□ 3.38
CYTH3-208ENST00000482460 HNRNPMP52272 730 aaKnown RBP eCLIP36.14■■■■□ 3.382e-7■■□□□ 14.5
CYTH3-208ENST00000482460 KIAA1107Q9UPP5 1409 aa36.14■■■■□ 3.38
CYTH3-208ENST00000482460 SYCP2Q9BX26 1530 aa36.13■■■■□ 3.38
CYTH3-208ENST00000482460 PLEKHH2Q8IVE3 1493 aa36.13■■■■□ 3.37
CYTH3-208ENST00000482460 ABCA6Q8N139 1617 aa36.13■■■■□ 3.37
CYTH3-208ENST00000482460 REREQ9P2R6 1566 aa36.13■■■■□ 3.37
CYTH3-208ENST00000482460 TIAM1Q13009 1591 aa36.12■■■■□ 3.37
CYTH3-208ENST00000482460 FER1L4A9Z1Z3 1794 aa36.11■■■■□ 3.37
CYTH3-208ENST00000482460 KIDINS220Q9ULH0 1771 aa36.11■■■■□ 3.37
CYTH3-208ENST00000482460 SPAG9O60271 1321 aaKnown RBP36.06■■■■□ 3.36
CYTH3-208ENST00000482460 SUPT6HQ7KZ85 1726 aaKnown RBP36.04■■■■□ 3.36
CYTH3-208ENST00000482460 PLPPR3Q6T4P5 718 aa36.02■■■■□ 3.36
CYTH3-208ENST00000482460 NCOA2Q15596 1464 aa36.02■■■■□ 3.36
CYTH3-208ENST00000482460 AGLP35573 1532 aa36.02■■■■□ 3.36
CYTH3-208ENST00000482460 ZNF644Q9H582 1327 aaPredicted RBP36.01■■■■□ 3.35
CYTH3-208ENST00000482460 LRRC9Q6ZRR7 1453 aa35.96■■■■□ 3.35
CYTH3-208ENST00000482460 ATP7AQ04656 1500 aa35.95■■■■□ 3.35
CYTH3-208ENST00000482460 MAP3K1Q13233 1512 aa35.95■■■■□ 3.35
CYTH3-208ENST00000482460 LMTK3Q96Q04 1460 aa35.94■■■■□ 3.34
CYTH3-208ENST00000482460 MBD5Q9P267 1494 aa35.93■■■■□ 3.34
CYTH3-208ENST00000482460 INO80Q9ULG1 1556 aaPredicted RBP35.92■■■■□ 3.34
CYTH3-208ENST00000482460 CEBPAP49715 358 aaPredicted RBP35.87■■■■□ 3.33
CYTH3-208ENST00000482460 KANK4Q5T7N3 995 aaPredicted RBP35.87■■■■□ 3.33
CYTH3-208ENST00000482460 ESF1Q9H501 851 aaKnown RBP35.85■■■■□ 3.33
CYTH3-208ENST00000482460 RSPH4AQ5TD94 716 aa35.83■■■■□ 3.33
CYTH3-208ENST00000482460 A2MP01023 1474 aa35.83■■■■□ 3.33
CYTH3-208ENST00000482460 CAMSAP2Q08AD1 1489 aa35.83■■■■□ 3.33
CYTH3-208ENST00000482460 RTEL1-TNFRSF6BF6WH68 1400 aa35.82■■■■□ 3.32
CYTH3-208ENST00000482460 PLXNC1O60486 1568 aa35.79■■■■□ 3.32
CYTH3-208ENST00000482460 CCDC141Q6ZP82 1450 aa35.78■■■■□ 3.32
CYTH3-208ENST00000482460 ADGBQ8N7X0 1667 aa35.78■■■■□ 3.32
CYTH3-208ENST00000482460 HSPA2P54652 639 aa35.77■■■■□ 3.32
CYTH3-208ENST00000482460 SETD1BQ9UPS6 1966 aaKnown RBP35.76■■■■□ 3.32
CYTH3-208ENST00000482460 CNTLNQ9NXG0 1405 aa35.76■■■■□ 3.32
CYTH3-208ENST00000482460 APLP2Q06481 763 aa35.76■■■■□ 3.32
CYTH3-208ENST00000482460 C3P01024 1663 aa35.75■■■■□ 3.31
CYTH3-208ENST00000482460 PREX1Q8TCU6 1659 aa35.73■■■■□ 3.31
CYTH3-208ENST00000482460 ARHGEF5Q12774 1597 aa35.71■■■■□ 3.31
CYTH3-208ENST00000482460 MYOM3Q5VTT5 1437 aa35.68■■■■□ 3.3
CYTH3-208ENST00000482460 DHX29Q7Z478 1369 aaKnown RBP35.68■■■■□ 3.3
CYTH3-208ENST00000482460 MIA2Q96PC5 1412 aa35.67■■■■□ 3.3
CYTH3-208ENST00000482460 TSPY4P0CV99 314 aa35.67■■■■□ 3.3
CYTH3-208ENST00000482460 TSPY10P0CW01 314 aa35.67■■■■□ 3.3
CYTH3-208ENST00000482460 GGT6Q6P531 493 aa35.67■■■■□ 3.3
CYTH3-208ENST00000482460 MROH2AA6NES4 1674 aa35.65■■■■□ 3.3
CYTH3-208ENST00000482460 PPP6R1Q9UPN7 881 aa35.64■■■■□ 3.3
CYTH3-208ENST00000482460 UHRF1BP1Q6BDS2 1440 aa35.64■■■■□ 3.3
CYTH3-208ENST00000482460 ZMYM3Q14202 1370 aa35.63■■■■□ 3.29
CYTH3-208ENST00000482460 CLTCQ00610 1675 aaKnown RBP35.58■■■■□ 3.29
CYTH3-208ENST00000482460 KIF3BO15066 747 aa35.54■■■■□ 3.28
CYTH3-208ENST00000482460 ILDR1Q86SU0 546 aaPredicted RBP35.54■■■■□ 3.28
CYTH3-208ENST00000482460 NPATQ14207 1427 aa35.54■■■■□ 3.28
CYTH3-208ENST00000482460 MAST1Q9Y2H9 1570 aa35.52■■■■□ 3.28
CYTH3-208ENST00000482460 PTPN23Q9H3S7 1636 aa35.44■■■■□ 3.26
CYTH3-208ENST00000482460 PTPRKQ15262 1439 aa35.43■■■■□ 3.26
CYTH3-208ENST00000482460 STRCQ7RTU9 1775 aa35.42■■■■□ 3.26
CYTH3-208ENST00000482460 FGD6Q6ZV73 1430 aa35.4■■■■□ 3.26
CYTH3-208ENST00000482460 DMRT2Q9Y5R5 561 aa35.4■■■■□ 3.26
CYTH3-208ENST00000482460 FAM135AQ9P2D6 1515 aa35.4■■■■□ 3.26
CYTH3-208ENST00000482460 WASHC2CQ9Y4E1 1318 aa35.37■■■■□ 3.25
CYTH3-208ENST00000482460 KDM5DQ9BY66 1539 aa35.37■■■■□ 3.25
CYTH3-208ENST00000482460 TCOF1Q13428 1488 aaKnown RBP35.36■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms