RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 PREX2Q70Z35 1606 aa33.33■■■□□ 2.93
TRA2A-206ENST00000482395 CDC42BPBQ9Y5S2 1711 aa33.33■■■□□ 2.93
TRA2A-206ENST00000482395 MAGI2Q86UL8 1455 aa33.31■■■□□ 2.92
TRA2A-206ENST00000482395 SCAPERQ9BY12 1400 aa33.31■■■□□ 2.92
TRA2A-206ENST00000482395 POGZQ7Z3K3 1410 aa33.3■■■□□ 2.92
TRA2A-206ENST00000482395 CDC42BPAQ5VT25 1732 aa33.26■■■□□ 2.92
TRA2A-206ENST00000482395 ZFYVE16Q7Z3T8 1539 aa33.26■■■□□ 2.91
TRA2A-206ENST00000482395 ZNF518AQ6AHZ1 1483 aa33.21■■■□□ 2.91
TRA2A-206ENST00000482395 BCORL1Q5H9F3 1711 aa33.21■■■□□ 2.91
TRA2A-206ENST00000482395 ADAMTSL3P82987 1691 aa33.2■■■□□ 2.91
TRA2A-206ENST00000482395 KDM5CP41229 1560 aa33.17■■■□□ 2.9
TRA2A-206ENST00000482395 ABCC1P33527 1531 aa33.15■■■□□ 2.9
TRA2A-206ENST00000482395 MTUS2Q5JR59 1369 aa33.15■■■□□ 2.9
TRA2A-206ENST00000482395 EHBP1L1Q8N3D4 1523 aa33.15■■■□□ 2.9
TRA2A-206ENST00000482395 ITSN2Q9NZM3 1697 aa33.14■■■□□ 2.9
TRA2A-206ENST00000482395 YEATS2Q9ULM3 1422 aa33.14■■■□□ 2.9
TRA2A-206ENST00000482395 ARID4BQ4LE39 1312 aaPredicted RBP33.12■■■□□ 2.89
TRA2A-206ENST00000482395 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
TRA2A-206ENST00000482395 HECW2Q9P2P5 1572 aa33.1■■■□□ 2.89
TRA2A-206ENST00000482395 GPATCH8Q9UKJ3 1502 aaKnown RBP33.08■■■□□ 2.89
TRA2A-206ENST00000482395 MADDQ8WXG6 1647 aa33.06■■■□□ 2.88
TRA2A-206ENST00000482395 ATP10AO60312 1499 aa33.05■■■□□ 2.88
TRA2A-206ENST00000482395 C9orf84Q5VXU9 1444 aa33.05■■■□□ 2.88
TRA2A-206ENST00000482395 VPS8Q8N3P4 1428 aa33.05■■■□□ 2.88
TRA2A-206ENST00000482395 SIGLEC1Q9BZZ2 1709 aa33.04■■■□□ 2.88
TRA2A-206ENST00000482395 SAMD9LQ8IVG5 1584 aa33.04■■■□□ 2.88
TRA2A-206ENST00000482395 CCNB3Q8WWL7 1395 aa33.03■■■□□ 2.88
TRA2A-206ENST00000482395 PTPRMP28827 1452 aa33.02■■■□□ 2.88
TRA2A-206ENST00000482395 MLH3Q9UHC1 1453 aa33.02■■■□□ 2.88
TRA2A-206ENST00000482395 ARHGEF12Q9NZN5 1544 aa33.02■■■□□ 2.88
TRA2A-206ENST00000482395 AFAP1Q8N556 730 aa33■■■□□ 2.87
TRA2A-206ENST00000482395 TIAM1Q13009 1591 aa33■■■□□ 2.87
TRA2A-206ENST00000482395 PLEKHH2Q8IVE3 1493 aa32.99■■■□□ 2.87
TRA2A-206ENST00000482395 REREQ9P2R6 1566 aa32.99■■■□□ 2.87
TRA2A-206ENST00000482395 SUPT6HQ7KZ85 1726 aaKnown RBP32.98■■■□□ 2.87
TRA2A-206ENST00000482395 TRAPPC8Q9Y2L5 1435 aa32.98■■■□□ 2.87
TRA2A-206ENST00000482395 DIP2CQ9Y2E4 1556 aa32.97■■■□□ 2.87
TRA2A-206ENST00000482395 RIMS1Q86UR5 1692 aaKnown RBP32.97■■■□□ 2.87
TRA2A-206ENST00000482395 SYCP2Q9BX26 1530 aa32.95■■■□□ 2.87
TRA2A-206ENST00000482395 ABCA6Q8N139 1617 aa32.95■■■□□ 2.86
TRA2A-206ENST00000482395 KIAA1107Q9UPP5 1409 aa32.94■■■□□ 2.86
TRA2A-206ENST00000482395 CFDP1Q9UEE9 299 aaPredicted RBP32.94■■■□□ 2.86
TRA2A-206ENST00000482395 MYT1LQ9UL68 1186 aa32.93■■■□□ 2.86
TRA2A-206ENST00000482395 ZNF777Q9ULD5 760 aaPredicted RBP32.93■■■□□ 2.86
TRA2A-206ENST00000482395 FER1L4A9Z1Z3 1794 aa32.93■■■□□ 2.86
TRA2A-206ENST00000482395 KIDINS220Q9ULH0 1771 aa32.92■■■□□ 2.86
TRA2A-206ENST00000482395 MAP3K1Q13233 1512 aa32.89■■■□□ 2.86
TRA2A-206ENST00000482395 NCOA2Q15596 1464 aa32.86■■■□□ 2.85
TRA2A-206ENST00000482395 AGLP35573 1532 aa32.83■■■□□ 2.85
TRA2A-206ENST00000482395 LRRC9Q6ZRR7 1453 aa32.83■■■□□ 2.85
TRA2A-206ENST00000482395 INO80Q9ULG1 1556 aaPredicted RBP32.8■■■□□ 2.84
TRA2A-206ENST00000482395 HNRNPMP52272 730 aaKnown RBP eCLIP32.8■■■□□ 2.84
TRA2A-206ENST00000482395 ATP7AQ04656 1500 aa32.79■■■□□ 2.84
TRA2A-206ENST00000482395 MLECQ14165 292 aa32.79■■■□□ 2.84
TRA2A-206ENST00000482395 SPAG9O60271 1321 aaKnown RBP32.78■■■□□ 2.84
TRA2A-206ENST00000482395 MBD5Q9P267 1494 aa32.73■■■□□ 2.83
TRA2A-206ENST00000482395 ADGBQ8N7X0 1667 aa32.7■■■□□ 2.83
TRA2A-206ENST00000482395 CAMSAP2Q08AD1 1489 aa32.7■■■□□ 2.83
TRA2A-206ENST00000482395 ZNF644Q9H582 1327 aaPredicted RBP32.68■■■□□ 2.82
TRA2A-206ENST00000482395 PLXNC1O60486 1568 aa32.66■■■□□ 2.82
TRA2A-206ENST00000482395 RSPH4AQ5TD94 716 aa32.66■■■□□ 2.82
TRA2A-206ENST00000482395 RTEL1-TNFRSF6BF6WH68 1400 aa32.66■■■□□ 2.82
TRA2A-206ENST00000482395 CCDC141Q6ZP82 1450 aa32.65■■■□□ 2.82
TRA2A-206ENST00000482395 APLP2Q06481 763 aa32.64■■■□□ 2.82
TRA2A-206ENST00000482395 ARHGEF5Q12774 1597 aa32.63■■■□□ 2.81
TRA2A-206ENST00000482395 A2MP01023 1474 aa32.63■■■□□ 2.81
TRA2A-206ENST00000482395 LMTK3Q96Q04 1460 aa32.63■■■□□ 2.81
TRA2A-206ENST00000482395 KANK4Q5T7N3 995 aaPredicted RBP32.61■■■□□ 2.81
TRA2A-206ENST00000482395 CNTLNQ9NXG0 1405 aa32.6■■■□□ 2.81
TRA2A-206ENST00000482395 ILDR1Q86SU0 546 aaPredicted RBP32.59■■■□□ 2.81
TRA2A-206ENST00000482395 ESF1Q9H501 851 aaKnown RBP32.59■■■□□ 2.81
TRA2A-206ENST00000482395 SETD1BQ9UPS6 1966 aaKnown RBP32.58■■■□□ 2.81
TRA2A-206ENST00000482395 PREX1Q8TCU6 1659 aa32.58■■■□□ 2.81
TRA2A-206ENST00000482395 MIA2Q96PC5 1412 aa32.58■■■□□ 2.81
TRA2A-206ENST00000482395 MYOM3Q5VTT5 1437 aa32.57■■■□□ 2.8
TRA2A-206ENST00000482395 MROH2AA6NES4 1674 aa32.56■■■□□ 2.8
TRA2A-206ENST00000482395 C3P01024 1663 aa32.56■■■□□ 2.8
TRA2A-206ENST00000482395 PLPPR3Q6T4P5 718 aa32.55■■■□□ 2.8
TRA2A-206ENST00000482395 MAST1Q9Y2H9 1570 aa32.47■■■□□ 2.79
TRA2A-206ENST00000482395 DHX29Q7Z478 1369 aaKnown RBP32.46■■■□□ 2.79
TRA2A-206ENST00000482395 TSPY4P0CV99 314 aa32.46■■■□□ 2.79
TRA2A-206ENST00000482395 TSPY10P0CW01 314 aa32.46■■■□□ 2.79
TRA2A-206ENST00000482395 CEBPAP49715 358 aaPredicted RBP32.46■■■□□ 2.79
TRA2A-206ENST00000482395 PPP6R1Q9UPN7 881 aa32.44■■■□□ 2.78
TRA2A-206ENST00000482395 CLTCQ00610 1675 aaKnown RBP32.43■■■□□ 2.78
TRA2A-206ENST00000482395 UHRF1BP1Q6BDS2 1440 aa32.42■■■□□ 2.78
TRA2A-206ENST00000482395 FAM135AQ9P2D6 1515 aa32.39■■■□□ 2.78
TRA2A-206ENST00000482395 PTPN23Q9H3S7 1636 aa32.39■■■□□ 2.78
TRA2A-206ENST00000482395 NPATQ14207 1427 aa32.36■■■□□ 2.77
TRA2A-206ENST00000482395 GGT6Q6P531 493 aa32.36■■■□□ 2.77
TRA2A-206ENST00000482395 ZMYM3Q14202 1370 aa32.34■■■□□ 2.77
TRA2A-206ENST00000482395 CROCC2H7BZ55 1655 aa32.34■■■□□ 2.77
TRA2A-206ENST00000482395 HSPA2P54652 639 aa32.34■■■□□ 2.77
TRA2A-206ENST00000482395 FGD6Q6ZV73 1430 aa32.32■■■□□ 2.76
TRA2A-206ENST00000482395 TCOF1Q13428 1488 aaKnown RBP32.31■■■□□ 2.76
TRA2A-206ENST00000482395 SHANK2Q9UPX8 1470 aa32.31■■■□□ 2.76
TRA2A-206ENST00000482395 EIF2AK4Q9P2K8 1649 aaKnown RBP32.3■■■□□ 2.76
TRA2A-206ENST00000482395 KIF3BO15066 747 aa32.28■■■□□ 2.76
TRA2A-206ENST00000482395 DNMT1P26358 1616 aaKnown RBP32.27■■■□□ 2.76
TRA2A-206ENST00000482395 KDM5DQ9BY66 1539 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms