RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 SOX12O15370 315 aa8.84□□□□□ -0.99
KDM1A-204ENST00000481879 ANKRD13DQ6ZTN6 518 aa8.84□□□□□ -0.99
KDM1A-204ENST00000481879 TAOK2Q9UL54 1235 aa8.8□□□□□ -1
KDM1A-204ENST00000481879 ZSWIM6Q9HCJ5 1215 aa8.79□□□□□ -1
KDM1A-204ENST00000481879 MICALL2Q8IY33 904 aa8.78□□□□□ -1
KDM1A-204ENST00000481879 PHF8Q9UPP1 1060 aa8.78□□□□□ -1
KDM1A-204ENST00000481879 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
KDM1A-204ENST00000481879 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
KDM1A-204ENST00000481879 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
KDM1A-204ENST00000481879 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
KDM1A-204ENST00000481879 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
KDM1A-204ENST00000481879 NLRP6P59044 892 aa8.74□□□□□ -1.01
KDM1A-204ENST00000481879 HCSTQ9UBK5 93 aa8.74□□□□□ -1.01
KDM1A-204ENST00000481879 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
KDM1A-204ENST00000481879 TMEM92Q6UXU6 159 aa8.72□□□□□ -1.01
KDM1A-204ENST00000481879 STK25O00506 426 aa8.7□□□□□ -1.02
KDM1A-204ENST00000481879 PKD2Q13563 968 aa8.7□□□□□ -1.02
KDM1A-204ENST00000481879 FBXO22Q8NEZ5 403 aa8.69□□□□□ -1.02
KDM1A-204ENST00000481879 MFRPQ9BY79 579 aa8.67□□□□□ -1.02
KDM1A-204ENST00000481879 RGL2O15211 777 aa8.66□□□□□ -1.02
KDM1A-204ENST00000481879 ZNF316A6NFI3 1004 aaPredicted RBP8.65□□□□□ -1.02
KDM1A-204ENST00000481879 ARSIQ5FYB1 569 aa8.65□□□□□ -1.02
KDM1A-204ENST00000481879 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
KDM1A-204ENST00000481879 PBX2P40425 430 aa8.6□□□□□ -1.03
KDM1A-204ENST00000481879 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
KDM1A-204ENST00000481879 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.037e-15■■■□□ 16.4
KDM1A-204ENST00000481879 RGS20O76081 388 aa8.57□□□□□ -1.04
KDM1A-204ENST00000481879 C2orf72A6NCS6 295 aa8.56□□□□□ -1.04
KDM1A-204ENST00000481879 KIF3CO14782 793 aa8.56□□□□□ -1.04
KDM1A-204ENST00000481879 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
KDM1A-204ENST00000481879 TMC2Q8TDI7 906 aa8.53□□□□□ -1.04
KDM1A-204ENST00000481879 PPP1R37O75864 691 aa8.52□□□□□ -1.05
KDM1A-204ENST00000481879 ADGRD1Q6QNK2 874 aa8.51□□□□□ -1.05
KDM1A-204ENST00000481879 SLC34A2O95436 690 aa8.49□□□□□ -1.05
KDM1A-204ENST00000481879 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
KDM1A-204ENST00000481879 NUDT7P0C024 238 aa8.47□□□□□ -1.05
KDM1A-204ENST00000481879 PCDHGA4Q9Y5G9 962 aa8.47□□□□□ -1.05
KDM1A-204ENST00000481879 CHGAP10645 457 aaKnown RBP8.45□□□□□ -1.06
KDM1A-204ENST00000481879 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
KDM1A-204ENST00000481879 KCTD12Q96CX2 325 aaKnown RBP8.44□□□□□ -1.06
KDM1A-204ENST00000481879 LHX6Q9UPM6 363 aa8.44□□□□□ -1.06
KDM1A-204ENST00000481879 HRO43593 1189 aa8.43□□□□□ -1.06
KDM1A-204ENST00000481879 ARHGAP33O14559 1287 aa8.42□□□□□ -1.06
KDM1A-204ENST00000481879 TK2O00142 265 aa8.41□□□□□ -1.06
KDM1A-204ENST00000481879 A0A0G2JS52 829 aa8.4□□□□□ -1.06
KDM1A-204ENST00000481879 FOXK1P85037 733 aa8.4□□□□□ -1.06
KDM1A-204ENST00000481879 GPHNQ9NQX3 736 aaPredicted RBP8.4□□□□□ -1.06
KDM1A-204ENST00000481879 Q6ZNB5 142 aa8.39□□□□□ -1.07
KDM1A-204ENST00000481879 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
KDM1A-204ENST00000481879 DNAJC5Q9H3Z4 198 aa8.39□□□□□ -1.07
KDM1A-204ENST00000481879 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
KDM1A-204ENST00000481879 PSDA5PKW4 1024 aaPredicted RBP8.36□□□□□ -1.07
KDM1A-204ENST00000481879 DSG2Q14126 1118 aa8.36□□□□□ -1.07
KDM1A-204ENST00000481879 NKX1-1Q15270 411 aaPredicted RBP8.36□□□□□ -1.07
KDM1A-204ENST00000481879 RYDENQ9NUL5 291 aaKnown RBP8.36□□□□□ -1.07
KDM1A-204ENST00000481879 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
KDM1A-204ENST00000481879 TBC1D12O60347 775 aa8.35□□□□□ -1.07
KDM1A-204ENST00000481879 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
KDM1A-204ENST00000481879 PTPN5P54829 565 aa8.34□□□□□ -1.07
KDM1A-204ENST00000481879 PSEN2P49810 448 aa8.31□□□□□ -1.08
KDM1A-204ENST00000481879 STAC3Q96MF2 364 aa8.31□□□□□ -1.08
KDM1A-204ENST00000481879 PPP4R3BQ5MIZ7 849 aa8.28□□□□□ -1.08
KDM1A-204ENST00000481879 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
KDM1A-204ENST00000481879 PDE4AP27815 886 aa8.27□□□□□ -1.09
KDM1A-204ENST00000481879 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
KDM1A-204ENST00000481879 LCE2BO14633 110 aa8.26□□□□□ -1.09
KDM1A-204ENST00000481879 GTPBP6O43824 516 aaPredicted RBP8.25□□□□□ -1.09
KDM1A-204ENST00000481879 PPP1R15BQ5SWA1 713 aa8.25□□□□□ -1.09
KDM1A-204ENST00000481879 UPF1Q92900 1129 aaKnown RBP eCLIP8.25□□□□□ -1.09
KDM1A-204ENST00000481879 NCKAP5LQ9HCH0 1330 aa8.23□□□□□ -1.09
KDM1A-204ENST00000481879 DCAF8L2P0C7V8 631 aa8.22□□□□□ -1.09
KDM1A-204ENST00000481879 KCNH8Q96L42 1107 aa8.22□□□□□ -1.09
KDM1A-204ENST00000481879 THSD4Q6ZMP0 1018 aa8.21□□□□□ -1.1
KDM1A-204ENST00000481879 TRAF7Q6Q0C0 670 aa8.2□□□□□ -1.1
KDM1A-204ENST00000481879 ZNF454Q8N9F8 522 aa8.2□□□□□ -1.1
KDM1A-204ENST00000481879 KCNK17Q96T54 332 aa8.2□□□□□ -1.1
KDM1A-204ENST00000481879 LARP6Q9BRS8 491 aaKnown RBP8.2□□□□□ -1.1
KDM1A-204ENST00000481879 DDX27Q96GQ7 796 aaKnown RBP8.18□□□□□ -1.1
KDM1A-204ENST00000481879 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
KDM1A-204ENST00000481879 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
KDM1A-204ENST00000481879 LAPTM4AQ15012 233 aa8.17□□□□□ -1.1
KDM1A-204ENST00000481879 EVI5O60447 810 aa8.16□□□□□ -1.1
KDM1A-204ENST00000481879 FOSBP53539 338 aa8.16□□□□□ -1.1
KDM1A-204ENST00000481879 BCL2L12Q9HB09 334 aa8.16□□□□□ -1.1
KDM1A-204ENST00000481879 MAP3K9P80192 1104 aa8.15□□□□□ -1.1
KDM1A-204ENST00000481879 MFSD10Q14728 455 aa8.15□□□□□ -1.1
KDM1A-204ENST00000481879 PTPREP23469 700 aa8.13□□□□□ -1.11
KDM1A-204ENST00000481879 JPH4Q96JJ6 628 aa8.13□□□□□ -1.11
KDM1A-204ENST00000481879 SLC4A5Q9BY07 1137 aa8.13□□□□□ -1.11
KDM1A-204ENST00000481879 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
KDM1A-204ENST00000481879 BHMG1C9JSJ3 638 aaPredicted RBP8.11□□□□□ -1.11
KDM1A-204ENST00000481879 WNT2BQ93097 391 aa8.11□□□□□ -1.11
KDM1A-204ENST00000481879 ZDHHC16Q969W1 377 aa8.11□□□□□ -1.11
KDM1A-204ENST00000481879 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
KDM1A-204ENST00000481879 EMILIN3Q9NT22 766 aa8.1□□□□□ -1.11
KDM1A-204ENST00000481879 ZBED2Q9BTP6 218 aa8.09□□□□□ -1.11
KDM1A-204ENST00000481879 ADAM33Q9BZ11 813 aa8.09□□□□□ -1.11
KDM1A-204ENST00000481879 GOLGA8CPA6NN73 597 aa8.08□□□□□ -1.12
KDM1A-204ENST00000481879 GFRA3O60609 400 aa8.08□□□□□ -1.12
KDM1A-204ENST00000481879 ZNF775Q96BV0 537 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms