RNA–Protein interactions for RNA: ENST00000481037.5

RBM39-232, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-232ENST00000481037 HS3ST6Q96QI5 342 aa16.36■□□□□ 0.21
RBM39-232ENST00000481037 FAM205CA6NFA0 338 aa16.35■□□□□ 0.21
RBM39-232ENST00000481037 HS6ST3Q8IZP7 471 aa16.33■□□□□ 0.2
RBM39-232ENST00000481037 ZSWIM6Q9HCJ5 1215 aa16.32■□□□□ 0.2
RBM39-232ENST00000481037 POTEB3A0JP26 581 aa16.31■□□□□ 0.2
RBM39-232ENST00000481037 POTEBQ6S5H4 581 aa16.31■□□□□ 0.2
RBM39-232ENST00000481037 KIF3CO14782 793 aa16.26■□□□□ 0.19
RBM39-232ENST00000481037 C2orf72A6NCS6 295 aa16.23■□□□□ 0.19
RBM39-232ENST00000481037 PPP1R37O75864 691 aa16.23■□□□□ 0.19
RBM39-232ENST00000481037 GPR153Q6NV75 609 aa16.23■□□□□ 0.19
RBM39-232ENST00000481037 ERBB3P21860 1342 aa16.22■□□□□ 0.19
RBM39-232ENST00000481037 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
RBM39-232ENST00000481037 KRTAP3-3Q9BYR6 98 aa16.2■□□□□ 0.18
RBM39-232ENST00000481037 KRTAP3-2Q9BYR7 98 aa16.2■□□□□ 0.18
RBM39-232ENST00000481037 SPNS2Q8IVW8 549 aa16.19■□□□□ 0.18
RBM39-232ENST00000481037 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
RBM39-232ENST00000481037 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
RBM39-232ENST00000481037 VARS2Q5ST30 1063 aaKnown RBP16.14■□□□□ 0.17
RBM39-232ENST00000481037 ARSIQ5FYB1 569 aa16.13■□□□□ 0.17
RBM39-232ENST00000481037 MMRN1Q13201 1228 aa16.12■□□□□ 0.17
RBM39-232ENST00000481037 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
RBM39-232ENST00000481037 SLC34A2O95436 690 aa16.07■□□□□ 0.16
RBM39-232ENST00000481037 KHSRPQ92945 711 aaKnown RBP eCLIP16.05■□□□□ 0.162e-10■■□□□ 13.5
RBM39-232ENST00000481037 RYDENQ9NUL5 291 aaKnown RBP16.05■□□□□ 0.16
RBM39-232ENST00000481037 ZNF687Q8N1G0 1237 aa16.04■□□□□ 0.16
RBM39-232ENST00000481037 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
RBM39-232ENST00000481037 PCDHGA4Q9Y5G9 962 aa16■□□□□ 0.15
RBM39-232ENST00000481037 FOXK1P85037 733 aa15.98■□□□□ 0.15
RBM39-232ENST00000481037 GPHNQ9NQX3 736 aaPredicted RBP15.98■□□□□ 0.15
RBM39-232ENST00000481037 NUDT7P0C024 238 aa15.97■□□□□ 0.15
RBM39-232ENST00000481037 PLPP6Q8IY26 295 aa15.92■□□□□ 0.14
RBM39-232ENST00000481037 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
RBM39-232ENST00000481037 DCAF8L2P0C7V8 631 aa15.89■□□□□ 0.13
RBM39-232ENST00000481037 DSG2Q14126 1118 aa15.89■□□□□ 0.13
RBM39-232ENST00000481037 LHX6Q9UPM6 363 aa15.89■□□□□ 0.13
RBM39-232ENST00000481037 GTPBP6O43824 516 aaPredicted RBP15.86■□□□□ 0.13
RBM39-232ENST00000481037 CRISPLD2Q9H0B8 497 aa15.84■□□□□ 0.13
RBM39-232ENST00000481037 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
RBM39-232ENST00000481037 PBX2P40425 430 aa15.81■□□□□ 0.12
RBM39-232ENST00000481037 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
RBM39-232ENST00000481037 TBC1D12O60347 775 aa15.77■□□□□ 0.12
RBM39-232ENST00000481037 PTGER2P43116 358 aa15.77■□□□□ 0.12
RBM39-232ENST00000481037 LSM11P83369 360 aaKnown RBP eCLIP15.77■□□□□ 0.121e-13■□□□□ 8.6
RBM39-232ENST00000481037 ANKRD13DQ6ZTN6 518 aa15.76■□□□□ 0.11
RBM39-232ENST00000481037 NCKAP5LQ9HCH0 1330 aa15.75■□□□□ 0.11
RBM39-232ENST00000481037 PPP1R15BQ5SWA1 713 aa15.75■□□□□ 0.11
RBM39-232ENST00000481037 RNF166Q96A37 237 aaPredicted RBP15.75■□□□□ 0.11
RBM39-232ENST00000481037 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
RBM39-232ENST00000481037 PDE4AP27815 886 aa15.74■□□□□ 0.11
RBM39-232ENST00000481037 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
RBM39-232ENST00000481037 OXER1Q8TDS5 423 aa15.72■□□□□ 0.11
RBM39-232ENST00000481037 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
RBM39-232ENST00000481037 UPF1Q92900 1129 aaKnown RBP eCLIP15.67■□□□□ 0.1
RBM39-232ENST00000481037 ARHGAP33O14559 1287 aa15.65■□□□□ 0.1
RBM39-232ENST00000481037 PPP4R3BQ5MIZ7 849 aa15.65■□□□□ 0.1
RBM39-232ENST00000481037 LARP6Q9BRS8 491 aaKnown RBP15.64■□□□□ 0.09
RBM39-232ENST00000481037 DDX27Q96GQ7 796 aaKnown RBP15.63■□□□□ 0.09
RBM39-232ENST00000481037 MFSD10Q14728 455 aa15.62■□□□□ 0.09
RBM39-232ENST00000481037 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
RBM39-232ENST00000481037 ADGRD1Q6QNK2 874 aa15.56■□□□□ 0.08
RBM39-232ENST00000481037 CADPS2Q86UW7 1296 aa15.55■□□□□ 0.08
RBM39-232ENST00000481037 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
RBM39-232ENST00000481037 PSEN2P49810 448 aa15.54■□□□□ 0.08
RBM39-232ENST00000481037 TK2O00142 265 aa15.53■□□□□ 0.08
RBM39-232ENST00000481037 DMRTA1Q5VZB9 504 aa15.52■□□□□ 0.08
RBM39-232ENST00000481037 ZNF454Q8N9F8 522 aa15.51■□□□□ 0.07
RBM39-232ENST00000481037 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
RBM39-232ENST00000481037 KCNH8Q96L42 1107 aa15.5■□□□□ 0.07
RBM39-232ENST00000481037 EVI5O60447 810 aa15.49■□□□□ 0.07
RBM39-232ENST00000481037 KCNK17Q96T54 332 aa15.48■□□□□ 0.07
RBM39-232ENST00000481037 FOSBP53539 338 aa15.47■□□□□ 0.07
RBM39-232ENST00000481037 EMILIN3Q9NT22 766 aa15.47■□□□□ 0.07
RBM39-232ENST00000481037 MAP3K9P80192 1104 aa15.46■□□□□ 0.07
RBM39-232ENST00000481037 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
RBM39-232ENST00000481037 HRO43593 1189 aa15.45■□□□□ 0.06
RBM39-232ENST00000481037 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
RBM39-232ENST00000481037 RTN4Q9NQC3 1192 aaKnown RBP15.45■□□□□ 0.06
RBM39-232ENST00000481037 PTPREP23469 700 aa15.38■□□□□ 0.05
RBM39-232ENST00000481037 CAMK2BQ13554 666 aa15.38■□□□□ 0.05
RBM39-232ENST00000481037 ZDHHC16Q969W1 377 aa15.38■□□□□ 0.05
RBM39-232ENST00000481037 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
RBM39-232ENST00000481037 SPRYD3Q8NCJ5 442 aa15.37■□□□□ 0.05
RBM39-232ENST00000481037 SLC4A5Q9BY07 1137 aa15.36■□□□□ 0.05
RBM39-232ENST00000481037 VPS9D1Q9Y2B5 631 aa15.36■□□□□ 0.05
RBM39-232ENST00000481037 ADAM33Q9BZ11 813 aa15.34■□□□□ 0.05
RBM39-232ENST00000481037 STAC3Q96MF2 364 aa15.33■□□□□ 0.04
RBM39-232ENST00000481037 HCSTQ9UBK5 93 aa15.33■□□□□ 0.04
RBM39-232ENST00000481037 PCDHGA10Q9Y5H3 936 aa15.3■□□□□ 0.04
RBM39-232ENST00000481037 ZBED2Q9BTP6 218 aa15.29■□□□□ 0.04
RBM39-232ENST00000481037 DPYSL4O14531 572 aa15.27■□□□□ 0.04
RBM39-232ENST00000481037 PHF14O94880 888 aa15.26■□□□□ 0.03
RBM39-232ENST00000481037 FBXW7Q969H0 707 aa15.25■□□□□ 0.03
RBM39-232ENST00000481037 KCTD12Q96CX2 325 aaKnown RBP15.25■□□□□ 0.03
RBM39-232ENST00000481037 BHMG1C9JSJ3 638 aaPredicted RBP15.24■□□□□ 0.03
RBM39-232ENST00000481037 TYW1BQ6NUM6 668 aa15.24■□□□□ 0.03
RBM39-232ENST00000481037 PPP1R3GB7ZBB8 358 aa15.22■□□□□ 0.03
RBM39-232ENST00000481037 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
RBM39-232ENST00000481037 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
RBM39-232ENST00000481037 EPAS1Q99814 870 aa15.19■□□□□ 0.02
RBM39-232ENST00000481037 NBPF3Q9H094 633 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms