RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
LSM5-210ENST00000480956 FLIIQ13045 1269 aa12.85□□□□□ -0.35
LSM5-210ENST00000480956 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
LSM5-210ENST00000480956 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
LSM5-210ENST00000480956 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
LSM5-210ENST00000480956 MAP3K13O43283 966 aa12.82□□□□□ -0.36
LSM5-210ENST00000480956 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
LSM5-210ENST00000480956 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
LSM5-210ENST00000480956 TMCO4Q5TGY1 634 aa12.8□□□□□ -0.36
LSM5-210ENST00000480956 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
LSM5-210ENST00000480956 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.36
LSM5-210ENST00000480956 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
LSM5-210ENST00000480956 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
LSM5-210ENST00000480956 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
LSM5-210ENST00000480956 MS4A3Q96HJ5 214 aa12.75□□□□□ -0.37
LSM5-210ENST00000480956 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
LSM5-210ENST00000480956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
LSM5-210ENST00000480956 GABBR2O75899 941 aa12.74□□□□□ -0.37
LSM5-210ENST00000480956 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
LSM5-210ENST00000480956 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
LSM5-210ENST00000480956 PCDHB13Q9Y5F0 798 aa12.74□□□□□ -0.37
LSM5-210ENST00000480956 TRAK2O60296 914 aa12.73□□□□□ -0.37
LSM5-210ENST00000480956 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
LSM5-210ENST00000480956 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
LSM5-210ENST00000480956 E2F4Q16254 413 aa12.72□□□□□ -0.37
LSM5-210ENST00000480956 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
LSM5-210ENST00000480956 A6NJR5 290 aa12.71□□□□□ -0.38
LSM5-210ENST00000480956 FOXD4L5Q5VV16 416 aaPredicted RBP12.71□□□□□ -0.38
LSM5-210ENST00000480956 FOXD4L4Q8WXT5 416 aaPredicted RBP12.71□□□□□ -0.38
LSM5-210ENST00000480956 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.38
LSM5-210ENST00000480956 PDE4DQ08499 809 aa12.68□□□□□ -0.38
LSM5-210ENST00000480956 ZNF428Q96B54 188 aa12.68□□□□□ -0.38
LSM5-210ENST00000480956 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
LSM5-210ENST00000480956 GZF1Q9H116 711 aaPredicted RBP12.66□□□□□ -0.38
LSM5-210ENST00000480956 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
LSM5-210ENST00000480956 TRIM66O15016 1216 aa12.64□□□□□ -0.39
LSM5-210ENST00000480956 E9PSI1 815 aa12.63□□□□□ -0.39
LSM5-210ENST00000480956 FAM117AQ9C073 453 aa12.62□□□□□ -0.39
LSM5-210ENST00000480956 ONECUT3O60422 494 aaPredicted RBP12.6□□□□□ -0.39
LSM5-210ENST00000480956 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
LSM5-210ENST00000480956 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
LSM5-210ENST00000480956 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
LSM5-210ENST00000480956 CLCN6P51797 869 aa12.57□□□□□ -0.4
LSM5-210ENST00000480956 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
LSM5-210ENST00000480956 SERPINA10Q9UK55 444 aa12.57□□□□□ -0.4
LSM5-210ENST00000480956 DDRGK1Q96HY6 314 aa12.56□□□□□ -0.4
LSM5-210ENST00000480956 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
LSM5-210ENST00000480956 PSEN1P49768 467 aa12.54□□□□□ -0.4
LSM5-210ENST00000480956 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
LSM5-210ENST00000480956 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
LSM5-210ENST00000480956 ZNF777Q9ULD5 760 aaPredicted RBP12.53□□□□□ -0.4
LSM5-210ENST00000480956 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
LSM5-210ENST00000480956 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
LSM5-210ENST00000480956 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
LSM5-210ENST00000480956 CHMP4AQ9BY43 222 aa12.52□□□□□ -0.41
LSM5-210ENST00000480956 TIE1P35590 1138 aa12.51□□□□□ -0.41
LSM5-210ENST00000480956 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
LSM5-210ENST00000480956 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
LSM5-210ENST00000480956 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
LSM5-210ENST00000480956 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
LSM5-210ENST00000480956 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
LSM5-210ENST00000480956 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
LSM5-210ENST00000480956 IRF5Q13568 498 aa12.46□□□□□ -0.41
LSM5-210ENST00000480956 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
LSM5-210ENST00000480956 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
LSM5-210ENST00000480956 MCM6Q14566 821 aa12.41□□□□□ -0.42
LSM5-210ENST00000480956 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
LSM5-210ENST00000480956 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.43
LSM5-210ENST00000480956 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.43
LSM5-210ENST00000480956 CABP2Q9NPB3 220 aa12.4□□□□□ -0.43
LSM5-210ENST00000480956 PATL2C9JE40 543 aaKnown RBP12.39□□□□□ -0.43
LSM5-210ENST00000480956 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
LSM5-210ENST00000480956 EFCAB3Q8N7B9 438 aa12.37□□□□□ -0.43
LSM5-210ENST00000480956 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
LSM5-210ENST00000480956 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
LSM5-210ENST00000480956 PDE4CQ08493 712 aa12.34□□□□□ -0.43
LSM5-210ENST00000480956 AMOTL2Q9Y2J4 779 aa12.34□□□□□ -0.43
LSM5-210ENST00000480956 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
LSM5-210ENST00000480956 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
LSM5-210ENST00000480956 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
LSM5-210ENST00000480956 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
LSM5-210ENST00000480956 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
LSM5-210ENST00000480956 PARP9Q8IXQ6 854 aa12.29□□□□□ -0.44
LSM5-210ENST00000480956 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
LSM5-210ENST00000480956 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
LSM5-210ENST00000480956 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
LSM5-210ENST00000480956 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
LSM5-210ENST00000480956 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
LSM5-210ENST00000480956 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
LSM5-210ENST00000480956 POM121Q96HA1 1249 aa12.28□□□□□ -0.44
LSM5-210ENST00000480956 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
LSM5-210ENST00000480956 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
LSM5-210ENST00000480956 PPP1R37O75864 691 aa12.27□□□□□ -0.45
LSM5-210ENST00000480956 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
LSM5-210ENST00000480956 AMHR2Q16671 573 aa12.26□□□□□ -0.45
LSM5-210ENST00000480956 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
LSM5-210ENST00000480956 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
LSM5-210ENST00000480956 NCKAP5LQ9HCH0 1330 aa12.25□□□□□ -0.45
LSM5-210ENST00000480956 KCNA1Q09470 495 aa12.25□□□□□ -0.45
LSM5-210ENST00000480956 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms