RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 HOXB1P14653 301 aaPredicted RBP9.5□□□□□ -0.89
FN1-221ENST00000480737 RYDENQ9NUL5 291 aaKnown RBP9.48□□□□□ -0.89
FN1-221ENST00000480737 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
FN1-221ENST00000480737 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
FN1-221ENST00000480737 AMER1Q5JTC6 1135 aaPredicted RBP9.46□□□□□ -0.9
FN1-221ENST00000480737 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
FN1-221ENST00000480737 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
FN1-221ENST00000480737 EMP3P54852 163 aa9.45□□□□□ -0.9
FN1-221ENST00000480737 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
FN1-221ENST00000480737 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
FN1-221ENST00000480737 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
FN1-221ENST00000480737 SLC34A2O95436 690 aa9.43□□□□□ -0.9
FN1-221ENST00000480737 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
FN1-221ENST00000480737 GTPBP6O43824 516 aaPredicted RBP9.42□□□□□ -0.9
FN1-221ENST00000480737 HS3ST6Q96QI5 342 aa9.41□□□□□ -0.9
FN1-221ENST00000480737 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
FN1-221ENST00000480737 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
FN1-221ENST00000480737 FOXK1P85037 733 aa9.38□□□□□ -0.91
FN1-221ENST00000480737 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
FN1-221ENST00000480737 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
FN1-221ENST00000480737 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
FN1-221ENST00000480737 KRTAP3-3Q9BYR6 98 aa9.35□□□□□ -0.91
FN1-221ENST00000480737 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
FN1-221ENST00000480737 ARSIQ5FYB1 569 aa9.33□□□□□ -0.92
FN1-221ENST00000480737 PLSCR2Q9NRY7 297 aa9.33□□□□□ -0.92
FN1-221ENST00000480737 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
FN1-221ENST00000480737 DSG2Q14126 1118 aa9.32□□□□□ -0.92
FN1-221ENST00000480737 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
FN1-221ENST00000480737 ERBB3P21860 1342 aa9.31□□□□□ -0.92
FN1-221ENST00000480737 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
FN1-221ENST00000480737 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
FN1-221ENST00000480737 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
FN1-221ENST00000480737 PLPP6Q8IY26 295 aa9.3□□□□□ -0.92
FN1-221ENST00000480737 BBXQ8WY36 941 aaPredicted RBP9.3□□□□□ -0.92
FN1-221ENST00000480737 KHSRPQ92945 711 aaKnown RBP eCLIP9.3□□□□□ -0.92
FN1-221ENST00000480737 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
FN1-221ENST00000480737 VARS2Q5ST30 1063 aaKnown RBP9.29□□□□□ -0.92
FN1-221ENST00000480737 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
FN1-221ENST00000480737 MFSD10Q14728 455 aa9.27□□□□□ -0.93
FN1-221ENST00000480737 NUDT7P0C024 238 aa9.26□□□□□ -0.93
FN1-221ENST00000480737 SPNS2Q8IVW8 549 aa9.26□□□□□ -0.93
FN1-221ENST00000480737 PDE4AP27815 886 aa9.25□□□□□ -0.93
FN1-221ENST00000480737 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
FN1-221ENST00000480737 OXER1Q8TDS5 423 aa9.24□□□□□ -0.93
FN1-221ENST00000480737 CADPS2Q86UW7 1296 aa9.21□□□□□ -0.94
FN1-221ENST00000480737 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
FN1-221ENST00000480737 MMRN1Q13201 1228 aa9.2□□□□□ -0.94
FN1-221ENST00000480737 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
FN1-221ENST00000480737 DDX27Q96GQ7 796 aaKnown RBP9.19□□□□□ -0.94
FN1-221ENST00000480737 TBC1D12O60347 775 aa9.18□□□□□ -0.94
FN1-221ENST00000480737 PBX2P40425 430 aa9.17□□□□□ -0.94
FN1-221ENST00000480737 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
FN1-221ENST00000480737 LARP6Q9BRS8 491 aaKnown RBP9.17□□□□□ -0.94
FN1-221ENST00000480737 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
FN1-221ENST00000480737 CAMK2BQ13554 666 aa9.14□□□□□ -0.95
FN1-221ENST00000480737 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.14□□□□□ -0.95
FN1-221ENST00000480737 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
FN1-221ENST00000480737 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
FN1-221ENST00000480737 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
FN1-221ENST00000480737 UPF1Q92900 1129 aaKnown RBP eCLIP9.11□□□□□ -0.95
FN1-221ENST00000480737 PTGER2P43116 358 aa9.1□□□□□ -0.95
FN1-221ENST00000480737 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
FN1-221ENST00000480737 ARHGAP33O14559 1287 aa9.07□□□□□ -0.96
FN1-221ENST00000480737 FOSBP53539 338 aa9.07□□□□□ -0.96
FN1-221ENST00000480737 JPH4Q96JJ6 628 aa9.06□□□□□ -0.96
FN1-221ENST00000480737 EVI5O60447 810 aa9.05□□□□□ -0.96
FN1-221ENST00000480737 PAXIP1Q6ZW49 1069 aaPredicted RBP9.05□□□□□ -0.96
FN1-221ENST00000480737 BCL2L12Q9HB09 334 aa9.04□□□□□ -0.96
FN1-221ENST00000480737 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
FN1-221ENST00000480737 TK2O00142 265 aa9.03□□□□□ -0.96
FN1-221ENST00000480737 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
FN1-221ENST00000480737 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
FN1-221ENST00000480737 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
FN1-221ENST00000480737 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
FN1-221ENST00000480737 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
FN1-221ENST00000480737 CFAP44Q96MT7 982 aa9.01□□□□□ -0.97
FN1-221ENST00000480737 ARIH1Q9Y4X5 557 aaPredicted RBP9.01□□□□□ -0.97
FN1-221ENST00000480737 HRO43593 1189 aa9□□□□□ -0.97
FN1-221ENST00000480737 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
FN1-221ENST00000480737 ADGRD1Q6QNK2 874 aa9□□□□□ -0.97
FN1-221ENST00000480737 PSEN2P49810 448 aa8.99□□□□□ -0.97
FN1-221ENST00000480737 SLC4A5Q9BY07 1137 aa8.99□□□□□ -0.97
FN1-221ENST00000480737 DPYSL4O14531 572 aa8.97□□□□□ -0.97
FN1-221ENST00000480737 ZDHHC16Q969W1 377 aa8.97□□□□□ -0.97
FN1-221ENST00000480737 PHF14O94880 888 aa8.96□□□□□ -0.98
FN1-221ENST00000480737 PDIA6Q15084 440 aa8.96□□□□□ -0.98
FN1-221ENST00000480737 KCNK17Q96T54 332 aa8.96□□□□□ -0.98
FN1-221ENST00000480737 PCDHGA10Q9Y5H3 936 aa8.96□□□□□ -0.98
FN1-221ENST00000480737 ADAM33Q9BZ11 813 aa8.95□□□□□ -0.98
FN1-221ENST00000480737 PTPREP23469 700 aa8.94□□□□□ -0.98
FN1-221ENST00000480737 E2F4Q16254 413 aa8.94□□□□□ -0.98
FN1-221ENST00000480737 FBXW7Q969H0 707 aa8.94□□□□□ -0.98
FN1-221ENST00000480737 TYW1BQ6NUM6 668 aa8.93□□□□□ -0.98
FN1-221ENST00000480737 KCNH8Q96L42 1107 aa8.93□□□□□ -0.98
FN1-221ENST00000480737 ZBED2Q9BTP6 218 aa8.93□□□□□ -0.98
FN1-221ENST00000480737 VPS9D1Q9Y2B5 631 aa8.93□□□□□ -0.98
FN1-221ENST00000480737 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
FN1-221ENST00000480737 EPAS1Q99814 870 aa8.91□□□□□ -0.98
FN1-221ENST00000480737 PPP1R3GB7ZBB8 358 aa8.9□□□□□ -0.98
FN1-221ENST00000480737 BHMG1C9JSJ3 638 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms