RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SCUBE2Q9NQ36 999 aa13.37□□□□□ -0.27
CALD1-219ENST00000480638 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
CALD1-219ENST00000480638 TMEM92Q6UXU6 159 aa13.36□□□□□ -0.27
CALD1-219ENST00000480638 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
CALD1-219ENST00000480638 KIF3CO14782 793 aa13.32□□□□□ -0.28
CALD1-219ENST00000480638 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
CALD1-219ENST00000480638 PDE4AP27815 886 aa13.31□□□□□ -0.28
CALD1-219ENST00000480638 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
CALD1-219ENST00000480638 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
CALD1-219ENST00000480638 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
CALD1-219ENST00000480638 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
CALD1-219ENST00000480638 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
CALD1-219ENST00000480638 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
CALD1-219ENST00000480638 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
CALD1-219ENST00000480638 MFSD10Q14728 455 aa13.27□□□□□ -0.29
CALD1-219ENST00000480638 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
CALD1-219ENST00000480638 FOXK1P85037 733 aa13.24□□□□□ -0.29
CALD1-219ENST00000480638 DSG2Q14126 1118 aa13.24□□□□□ -0.29
CALD1-219ENST00000480638 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
CALD1-219ENST00000480638 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
CALD1-219ENST00000480638 PLPP6Q8IY26 295 aa13.18□□□□□ -0.3
CALD1-219ENST00000480638 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
CALD1-219ENST00000480638 E2F4Q16254 413 aa13.11□□□□□ -0.31
CALD1-219ENST00000480638 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
CALD1-219ENST00000480638 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
CALD1-219ENST00000480638 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
CALD1-219ENST00000480638 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
CALD1-219ENST00000480638 SLC34A2O95436 690 aa13.05□□□□□ -0.32
CALD1-219ENST00000480638 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
CALD1-219ENST00000480638 SNPHO15079 494 aa13.04□□□□□ -0.32
CALD1-219ENST00000480638 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
CALD1-219ENST00000480638 PTCD2Q8WV60 388 aaKnown RBP13.01□□□□□ -0.33
CALD1-219ENST00000480638 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
CALD1-219ENST00000480638 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
CALD1-219ENST00000480638 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
CALD1-219ENST00000480638 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
CALD1-219ENST00000480638 DPYSL4O14531 572 aa12.97□□□□□ -0.33
CALD1-219ENST00000480638 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
CALD1-219ENST00000480638 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
CALD1-219ENST00000480638 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
CALD1-219ENST00000480638 TBC1D12O60347 775 aa12.94□□□□□ -0.34
CALD1-219ENST00000480638 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
CALD1-219ENST00000480638 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
CALD1-219ENST00000480638 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
CALD1-219ENST00000480638 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.34
CALD1-219ENST00000480638 ST18O60284 1047 aa12.89□□□□□ -0.35
CALD1-219ENST00000480638 PDIA6Q15084 440 aa12.89□□□□□ -0.35
CALD1-219ENST00000480638 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
CALD1-219ENST00000480638 EVI5O60447 810 aa12.87□□□□□ -0.35
CALD1-219ENST00000480638 NUDT7P0C024 238 aa12.87□□□□□ -0.35
CALD1-219ENST00000480638 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
CALD1-219ENST00000480638 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
CALD1-219ENST00000480638 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
CALD1-219ENST00000480638 LCE2DQ5TA82 110 aaPredicted RBP12.85□□□□□ -0.35
CALD1-219ENST00000480638 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
CALD1-219ENST00000480638 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
CALD1-219ENST00000480638 NBR1Q14596 966 aa12.8□□□□□ -0.36
CALD1-219ENST00000480638 SEMA3EO15041 775 aa12.79□□□□□ -0.36
CALD1-219ENST00000480638 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
CALD1-219ENST00000480638 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
CALD1-219ENST00000480638 PTGER2P43116 358 aa12.76□□□□□ -0.37
CALD1-219ENST00000480638 EMP3P54852 163 aa12.76□□□□□ -0.37
CALD1-219ENST00000480638 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
CALD1-219ENST00000480638 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
CALD1-219ENST00000480638 BCANQ96GW7 911 aa12.74□□□□□ -0.37
CALD1-219ENST00000480638 DDX12PQ92771 950 aa12.73□□□□□ -0.37
CALD1-219ENST00000480638 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
CALD1-219ENST00000480638 ERBB3P21860 1342 aa12.7□□□□□ -0.38
CALD1-219ENST00000480638 FOSBP53539 338 aa12.7□□□□□ -0.38
CALD1-219ENST00000480638 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
CALD1-219ENST00000480638 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
CALD1-219ENST00000480638 PHF14O94880 888 aa12.69□□□□□ -0.38
CALD1-219ENST00000480638 ZNF454Q8N9F8 522 aa12.69□□□□□ -0.38
CALD1-219ENST00000480638 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
CALD1-219ENST00000480638 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
CALD1-219ENST00000480638 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
CALD1-219ENST00000480638 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
CALD1-219ENST00000480638 HS3ST6Q96QI5 342 aa12.65□□□□□ -0.38
CALD1-219ENST00000480638 EPAS1Q99814 870 aa12.65□□□□□ -0.38
CALD1-219ENST00000480638 OSBPP22059 807 aa12.64□□□□□ -0.39
CALD1-219ENST00000480638 TYW1BQ6NUM6 668 aa12.64□□□□□ -0.39
CALD1-219ENST00000480638 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
CALD1-219ENST00000480638 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
CALD1-219ENST00000480638 POTEBQ6S5H4 581 aa12.63□□□□□ -0.39
CALD1-219ENST00000480638 ZDHHC16Q969W1 377 aa12.63□□□□□ -0.39
CALD1-219ENST00000480638 FBXW7Q969H0 707 aa12.62□□□□□ -0.39
CALD1-219ENST00000480638 PRIM1P49642 420 aaKnown RBP12.61□□□□□ -0.39
CALD1-219ENST00000480638 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
CALD1-219ENST00000480638 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
CALD1-219ENST00000480638 ADAM33Q9BZ11 813 aa12.59□□□□□ -0.39
CALD1-219ENST00000480638 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
CALD1-219ENST00000480638 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
CALD1-219ENST00000480638 POTEMA6NI47 508 aa12.57□□□□□ -0.4
CALD1-219ENST00000480638 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
CALD1-219ENST00000480638 MAP3K7O43318 606 aa12.56□□□□□ -0.4
CALD1-219ENST00000480638 RBM26Q5T8P6 1007 aaKnown RBP12.56□□□□□ -0.4
CALD1-219ENST00000480638 ZNF687Q8N1G0 1237 aa12.56□□□□□ -0.4
CALD1-219ENST00000480638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.55□□□□□ -0.4
CALD1-219ENST00000480638 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
CALD1-219ENST00000480638 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms