RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
SCAMP3-207ENST00000480219 MAP3K4Q9Y6R4 1608 aa25.81■■□□□ 1.72
SCAMP3-207ENST00000480219 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
SCAMP3-207ENST00000480219 CD109Q6YHK3 1445 aa25.75■■□□□ 1.71
SCAMP3-207ENST00000480219 KIF13AQ9H1H9 1805 aa25.74■■□□□ 1.71
SCAMP3-207ENST00000480219 ARHGAP5Q13017 1502 aa25.73■■□□□ 1.71
SCAMP3-207ENST00000480219 CAMSAP2Q08AD1 1489 aa25.72■■□□□ 1.71
SCAMP3-207ENST00000480219 SAMD9LQ8IVG5 1584 aa25.72■■□□□ 1.71
SCAMP3-207ENST00000480219 PLEKHH2Q8IVE3 1493 aa25.69■■□□□ 1.7
SCAMP3-207ENST00000480219 EFCAB2Q5VUJ9 269 aa25.69■■□□□ 1.7
SCAMP3-207ENST00000480219 KIAA1107Q9UPP5 1409 aa25.69■■□□□ 1.7
SCAMP3-207ENST00000480219 CFAP74Q9C0B2 1584 aa25.69■■□□□ 1.7
SCAMP3-207ENST00000480219 FAM69CQ0P6D2 419 aa25.68■■□□□ 1.7
SCAMP3-207ENST00000480219 FANCAO15360 1455 aa25.67■■□□□ 1.7
SCAMP3-207ENST00000480219 NEO1Q92859 1461 aa25.66■■□□□ 1.7
SCAMP3-207ENST00000480219 ZNF644Q9H582 1327 aaPredicted RBP25.65■■□□□ 1.7
SCAMP3-207ENST00000480219 ARHGEF5Q12774 1597 aa25.65■■□□□ 1.7
SCAMP3-207ENST00000480219 ABCC1P33527 1531 aa25.65■■□□□ 1.7
SCAMP3-207ENST00000480219 MBD5Q9P267 1494 aa25.65■■□□□ 1.7
SCAMP3-207ENST00000480219 PPRC1Q5VV67 1664 aaKnown RBP25.64■■□□□ 1.7
SCAMP3-207ENST00000480219 DNMT1P26358 1616 aaKnown RBP25.63■■□□□ 1.69
SCAMP3-207ENST00000480219 FAM50AQ14320 339 aaKnown RBP25.62■■□□□ 1.69
SCAMP3-207ENST00000480219 AKNAQ7Z591 1439 aa25.59■■□□□ 1.69
SCAMP3-207ENST00000480219 TEX14Q8IWB6 1497 aa25.59■■□□□ 1.69
SCAMP3-207ENST00000480219 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.69
SCAMP3-207ENST00000480219 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.69
SCAMP3-207ENST00000480219 ABCC5O15440 1437 aa25.58■■□□□ 1.69
SCAMP3-207ENST00000480219 DAPK1P53355 1430 aa25.58■■□□□ 1.69
SCAMP3-207ENST00000480219 RSPH4AQ5TD94 716 aa25.57■■□□□ 1.68
SCAMP3-207ENST00000480219 CROCC2H7BZ55 1655 aa25.56■■□□□ 1.68
SCAMP3-207ENST00000480219 SHANK2Q9UPX8 1470 aa25.56■■□□□ 1.68
SCAMP3-207ENST00000480219 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
SCAMP3-207ENST00000480219 PTPRKQ15262 1439 aa25.55■■□□□ 1.68
SCAMP3-207ENST00000480219 CCDC141Q6ZP82 1450 aa25.55■■□□□ 1.68
SCAMP3-207ENST00000480219 ADGRL1O94910 1474 aa25.54■■□□□ 1.68
SCAMP3-207ENST00000480219 PCGF6Q9BYE7 350 aa25.54■■□□□ 1.68
SCAMP3-207ENST00000480219 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
SCAMP3-207ENST00000480219 SCAPERQ9BY12 1400 aa25.5■■□□□ 1.67
SCAMP3-207ENST00000480219 ADGRL2O95490 1459 aa25.49■■□□□ 1.67
SCAMP3-207ENST00000480219 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
SCAMP3-207ENST00000480219 ROCK1Q13464 1354 aa25.48■■□□□ 1.67
SCAMP3-207ENST00000480219 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
SCAMP3-207ENST00000480219 TSPOAP1O95153 1857 aa25.47■■□□□ 1.67
SCAMP3-207ENST00000480219 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
SCAMP3-207ENST00000480219 KDM5CP41229 1560 aa25.45■■□□□ 1.66
SCAMP3-207ENST00000480219 ZNF518AQ6AHZ1 1483 aa25.45■■□□□ 1.66
SCAMP3-207ENST00000480219 ADGBQ8N7X0 1667 aa25.44■■□□□ 1.66
SCAMP3-207ENST00000480219 C9orf84Q5VXU9 1444 aa25.44■■□□□ 1.66
SCAMP3-207ENST00000480219 DENND4BO75064 1496 aaPredicted RBP25.43■■□□□ 1.66
SCAMP3-207ENST00000480219 RTEL1-TNFRSF6BF6WH68 1400 aa25.43■■□□□ 1.66
SCAMP3-207ENST00000480219 RICTORQ6R327 1708 aa25.41■■□□□ 1.66
SCAMP3-207ENST00000480219 HFM1A2PYH4 1435 aa25.41■■□□□ 1.66
SCAMP3-207ENST00000480219 NCOA1Q15788 1441 aa25.4■■□□□ 1.66
SCAMP3-207ENST00000480219 ITGAEP38570 1179 aa25.4■■□□□ 1.66
SCAMP3-207ENST00000480219 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
SCAMP3-207ENST00000480219 TSPY4P0CV99 314 aa25.39■■□□□ 1.66
SCAMP3-207ENST00000480219 TSPY10P0CW01 314 aa25.39■■□□□ 1.66
SCAMP3-207ENST00000480219 PLXNC1O60486 1568 aa25.39■■□□□ 1.65
SCAMP3-207ENST00000480219 ZFYVE16Q7Z3T8 1539 aa25.38■■□□□ 1.65
SCAMP3-207ENST00000480219 FRMPD1Q5SYB0 1578 aa25.38■■□□□ 1.65
SCAMP3-207ENST00000480219 MLH3Q9UHC1 1453 aa25.37■■□□□ 1.65
SCAMP3-207ENST00000480219 TRHP20396 242 aaPredicted RBP25.37■■□□□ 1.65
SCAMP3-207ENST00000480219 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
SCAMP3-207ENST00000480219 NAIPQ13075 1403 aa25.37■■□□□ 1.65
SCAMP3-207ENST00000480219 GCC2Q8IWJ2 1684 aa25.36■■□□□ 1.65
SCAMP3-207ENST00000480219 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
SCAMP3-207ENST00000480219 ANKRD30AQ9BXX3 1397 aa25.35■■□□□ 1.65
SCAMP3-207ENST00000480219 ATP7AQ04656 1500 aa25.33■■□□□ 1.65
SCAMP3-207ENST00000480219 COL17A1Q9UMD9 1497 aaPredicted RBP25.33■■□□□ 1.65
SCAMP3-207ENST00000480219 SPAG9O60271 1321 aaKnown RBP25.33■■□□□ 1.64
SCAMP3-207ENST00000480219 SETD5Q9C0A6 1442 aa25.32■■□□□ 1.64
SCAMP3-207ENST00000480219 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
SCAMP3-207ENST00000480219 CHIC2Q9UKJ5 165 aa25.31■■□□□ 1.64
SCAMP3-207ENST00000480219 KIDINS220Q9ULH0 1771 aa25.31■■□□□ 1.64
SCAMP3-207ENST00000480219 HRCP23327 699 aa25.3■■□□□ 1.64
SCAMP3-207ENST00000480219 MAGI2Q86UL8 1455 aa25.29■■□□□ 1.64
SCAMP3-207ENST00000480219 RAPGEF3O95398 923 aa25.26■■□□□ 1.63
SCAMP3-207ENST00000480219 KIF15Q9NS87 1388 aa25.26■■□□□ 1.63
SCAMP3-207ENST00000480219 DUOX2Q9NRD8 1548 aa25.25■■□□□ 1.63
SCAMP3-207ENST00000480219 RAB3GAP2Q9H2M9 1393 aa25.23■■□□□ 1.63
SCAMP3-207ENST00000480219 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
SCAMP3-207ENST00000480219 ERBINQ96RT1 1412 aa25.2■■□□□ 1.63
SCAMP3-207ENST00000480219 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.63
SCAMP3-207ENST00000480219 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
SCAMP3-207ENST00000480219 ACIN1Q9UKV3 1341 aaKnown RBP25.2■■□□□ 1.62
SCAMP3-207ENST00000480219 KDM6BO15054 1643 aa25.19■■□□□ 1.62
SCAMP3-207ENST00000480219 DIP2CQ9Y2E4 1556 aa25.19■■□□□ 1.62
SCAMP3-207ENST00000480219 REREQ9P2R6 1566 aa25.17■■□□□ 1.62
SCAMP3-207ENST00000480219 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
SCAMP3-207ENST00000480219 EIF2AK4Q9P2K8 1649 aaKnown RBP25.15■■□□□ 1.62
SCAMP3-207ENST00000480219 YEATS2Q9ULM3 1422 aa25.14■■□□□ 1.62
SCAMP3-207ENST00000480219 ARHGEF40Q8TER5 1519 aa25.14■■□□□ 1.62
SCAMP3-207ENST00000480219 BCORL1Q5H9F3 1711 aa25.14■■□□□ 1.61
SCAMP3-207ENST00000480219 A2MP01023 1474 aa25.14■■□□□ 1.61
SCAMP3-207ENST00000480219 ATP10AO60312 1499 aa25.09■■□□□ 1.61
SCAMP3-207ENST00000480219 UNC13BO14795 1591 aa25.09■■□□□ 1.61
SCAMP3-207ENST00000480219 KDM5DQ9BY66 1539 aa25.08■■□□□ 1.61
SCAMP3-207ENST00000480219 DEPDC5O75140 1603 aa25.08■■□□□ 1.6
SCAMP3-207ENST00000480219 AGLP35573 1532 aa25.06■■□□□ 1.6
SCAMP3-207ENST00000480219 RNF17Q9BXT8 1623 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms