RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 ABCA9Q8IUA7 1624 aa18.01■□□□□ 0.47
TM9SF4-206ENST00000479591 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
TM9SF4-206ENST00000479591 ARAP3Q8WWN8 1544 aa17.99■□□□□ 0.47
TM9SF4-206ENST00000479591 ITGAEP38570 1179 aa17.98■□□□□ 0.47
TM9SF4-206ENST00000479591 PLCH2O75038 1416 aa17.98■□□□□ 0.47
TM9SF4-206ENST00000479591 DNMT1P26358 1616 aaKnown RBP17.97■□□□□ 0.47
TM9SF4-206ENST00000479591 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
TM9SF4-206ENST00000479591 SAMD9LQ8IVG5 1584 aa17.94■□□□□ 0.46
TM9SF4-206ENST00000479591 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
TM9SF4-206ENST00000479591 DAPK1P53355 1430 aa17.93■□□□□ 0.46
TM9SF4-206ENST00000479591 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
TM9SF4-206ENST00000479591 PLEKHH2Q8IVE3 1493 aa17.93■□□□□ 0.46
TM9SF4-206ENST00000479591 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
TM9SF4-206ENST00000479591 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
TM9SF4-206ENST00000479591 EFCAB2Q5VUJ9 269 aa17.91■□□□□ 0.46
TM9SF4-206ENST00000479591 ABCC5O15440 1437 aa17.9■□□□□ 0.46
TM9SF4-206ENST00000479591 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
TM9SF4-206ENST00000479591 GLI2P10070 1586 aa17.9■□□□□ 0.46
TM9SF4-206ENST00000479591 AKNAQ7Z591 1439 aa17.89■□□□□ 0.46
TM9SF4-206ENST00000479591 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.46
TM9SF4-206ENST00000479591 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.45
TM9SF4-206ENST00000479591 SETD5Q9C0A6 1442 aa17.88■□□□□ 0.45
TM9SF4-206ENST00000479591 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
TM9SF4-206ENST00000479591 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
TM9SF4-206ENST00000479591 HFM1A2PYH4 1435 aa17.87■□□□□ 0.45
TM9SF4-206ENST00000479591 MBD5Q9P267 1494 aa17.87■□□□□ 0.45
TM9SF4-206ENST00000479591 CFAP74Q9C0B2 1584 aa17.87■□□□□ 0.45
TM9SF4-206ENST00000479591 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
TM9SF4-206ENST00000479591 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
TM9SF4-206ENST00000479591 ABCC1P33527 1531 aa17.86■□□□□ 0.45
TM9SF4-206ENST00000479591 FANCAO15360 1455 aa17.85■□□□□ 0.45
TM9SF4-206ENST00000479591 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
TM9SF4-206ENST00000479591 SYCP2Q9BX26 1530 aa17.85■□□□□ 0.45
TM9SF4-206ENST00000479591 GCC2Q8IWJ2 1684 aa17.84■□□□□ 0.45
TM9SF4-206ENST00000479591 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
TM9SF4-206ENST00000479591 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
TM9SF4-206ENST00000479591 HRCP23327 699 aa17.84■□□□□ 0.45
TM9SF4-206ENST00000479591 ADGRL2O95490 1459 aa17.83■□□□□ 0.45
TM9SF4-206ENST00000479591 NAIPQ13075 1403 aa17.82■□□□□ 0.44
TM9SF4-206ENST00000479591 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
TM9SF4-206ENST00000479591 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
TM9SF4-206ENST00000479591 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
TM9SF4-206ENST00000479591 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
TM9SF4-206ENST00000479591 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
TM9SF4-206ENST00000479591 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
TM9SF4-206ENST00000479591 C9orf84Q5VXU9 1444 aa17.8■□□□□ 0.44
TM9SF4-206ENST00000479591 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
TM9SF4-206ENST00000479591 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
TM9SF4-206ENST00000479591 NEO1Q92859 1461 aa17.78■□□□□ 0.44
TM9SF4-206ENST00000479591 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
TM9SF4-206ENST00000479591 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.44
TM9SF4-206ENST00000479591 ADGRL1O94910 1474 aa17.77■□□□□ 0.44
TM9SF4-206ENST00000479591 FAM69CQ0P6D2 419 aa17.76■□□□□ 0.43
TM9SF4-206ENST00000479591 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
TM9SF4-206ENST00000479591 RRP7BPQ9NSQ0 103 aa17.76■□□□□ 0.43
TM9SF4-206ENST00000479591 SCAPERQ9BY12 1400 aa17.73■□□□□ 0.43
TM9SF4-206ENST00000479591 KIF13AQ9H1H9 1805 aa17.73■□□□□ 0.43
TM9SF4-206ENST00000479591 PLXNC1O60486 1568 aa17.73■□□□□ 0.43
TM9SF4-206ENST00000479591 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
TM9SF4-206ENST00000479591 RTEL1-TNFRSF6BF6WH68 1400 aa17.72■□□□□ 0.43
TM9SF4-206ENST00000479591 TEX14Q8IWB6 1497 aa17.71■□□□□ 0.43
TM9SF4-206ENST00000479591 DHX57Q6P158 1386 aaKnown RBP17.7■□□□□ 0.42
TM9SF4-206ENST00000479591 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
TM9SF4-206ENST00000479591 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
TM9SF4-206ENST00000479591 KIF15Q9NS87 1388 aa17.68■□□□□ 0.42
TM9SF4-206ENST00000479591 PPRC1Q5VV67 1664 aaKnown RBP17.68■□□□□ 0.42
TM9SF4-206ENST00000479591 KDM6BO15054 1643 aa17.68■□□□□ 0.42
TM9SF4-206ENST00000479591 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
TM9SF4-206ENST00000479591 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
TM9SF4-206ENST00000479591 ZFYVE16Q7Z3T8 1539 aa17.67■□□□□ 0.42
TM9SF4-206ENST00000479591 INO80Q9ULG1 1556 aaPredicted RBP17.67■□□□□ 0.42
TM9SF4-206ENST00000479591 POGZQ7Z3K3 1410 aa17.67■□□□□ 0.42
TM9SF4-206ENST00000479591 ANKRD50Q9ULJ7 1429 aa17.67■□□□□ 0.42
TM9SF4-206ENST00000479591 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
TM9SF4-206ENST00000479591 KDM5CP41229 1560 aa17.66■□□□□ 0.42
TM9SF4-206ENST00000479591 AFAP1Q8N556 730 aa17.66■□□□□ 0.42
TM9SF4-206ENST00000479591 TSPOAP1O95153 1857 aa17.66■□□□□ 0.42
TM9SF4-206ENST00000479591 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
TM9SF4-206ENST00000479591 ATP7AQ04656 1500 aa17.65■□□□□ 0.42
TM9SF4-206ENST00000479591 DUOX2Q9NRD8 1548 aa17.65■□□□□ 0.42
TM9SF4-206ENST00000479591 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
TM9SF4-206ENST00000479591 RICTORQ6R327 1708 aa17.61■□□□□ 0.41
TM9SF4-206ENST00000479591 ERBINQ96RT1 1412 aa17.61■□□□□ 0.41
TM9SF4-206ENST00000479591 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
TM9SF4-206ENST00000479591 KIDINS220Q9ULH0 1771 aa17.6■□□□□ 0.41
TM9SF4-206ENST00000479591 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
TM9SF4-206ENST00000479591 MYT1LQ9UL68 1186 aa17.56■□□□□ 0.4
TM9SF4-206ENST00000479591 ZMYM4Q5VZL5 1548 aa17.56■□□□□ 0.4
TM9SF4-206ENST00000479591 KDM5DQ9BY66 1539 aa17.56■□□□□ 0.4
TM9SF4-206ENST00000479591 UNC13BO14795 1591 aa17.55■□□□□ 0.4
TM9SF4-206ENST00000479591 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
TM9SF4-206ENST00000479591 EIF2AK4Q9P2K8 1649 aaKnown RBP17.54■□□□□ 0.4
TM9SF4-206ENST00000479591 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
TM9SF4-206ENST00000479591 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
TM9SF4-206ENST00000479591 MAGI2Q86UL8 1455 aa17.52■□□□□ 0.4
TM9SF4-206ENST00000479591 MPHOSPH9Q99550 1183 aa17.52■□□□□ 0.4
TM9SF4-206ENST00000479591 PZPP20742 1482 aa17.51■□□□□ 0.39
TM9SF4-206ENST00000479591 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
TM9SF4-206ENST00000479591 A2MP01023 1474 aa17.5■□□□□ 0.39
TM9SF4-206ENST00000479591 NUP155O75694 1391 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms