RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
RC3H1-204ENST00000479099 PLSCR2Q9NRY7 297 aa10.8□□□□□ -0.68
RC3H1-204ENST00000479099 NLRP6P59044 892 aa10.78□□□□□ -0.68
RC3H1-204ENST00000479099 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
RC3H1-204ENST00000479099 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
RC3H1-204ENST00000479099 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
RC3H1-204ENST00000479099 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
RC3H1-204ENST00000479099 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
RC3H1-204ENST00000479099 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
RC3H1-204ENST00000479099 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
RC3H1-204ENST00000479099 TMEM92Q6UXU6 159 aa10.69□□□□□ -0.7
RC3H1-204ENST00000479099 DOK7Q18PE1 504 aa10.68□□□□□ -0.7
RC3H1-204ENST00000479099 EMP3P54852 163 aa10.67□□□□□ -0.7
RC3H1-204ENST00000479099 ZNF710Q8N1W2 664 aa10.65□□□□□ -0.7
RC3H1-204ENST00000479099 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
RC3H1-204ENST00000479099 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
RC3H1-204ENST00000479099 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
RC3H1-204ENST00000479099 HOXB1P14653 301 aaPredicted RBP10.61□□□□□ -0.71
RC3H1-204ENST00000479099 KDM2AQ9Y2K7 1162 aa10.59□□□□□ -0.71
RC3H1-204ENST00000479099 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
RC3H1-204ENST00000479099 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
RC3H1-204ENST00000479099 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
RC3H1-204ENST00000479099 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
RC3H1-204ENST00000479099 CHGAP10645 457 aaKnown RBP10.55□□□□□ -0.72
RC3H1-204ENST00000479099 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
RC3H1-204ENST00000479099 KIF3CO14782 793 aa10.54□□□□□ -0.72
RC3H1-204ENST00000479099 PPP1R37O75864 691 aa10.53□□□□□ -0.72
RC3H1-204ENST00000479099 TMEM132AQ24JP5 1023 aa10.53□□□□□ -0.72
RC3H1-204ENST00000479099 C2orf72A6NCS6 295 aa10.52□□□□□ -0.73
RC3H1-204ENST00000479099 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
RC3H1-204ENST00000479099 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
RC3H1-204ENST00000479099 ERBB3P21860 1342 aa10.51□□□□□ -0.73
RC3H1-204ENST00000479099 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
RC3H1-204ENST00000479099 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
RC3H1-204ENST00000479099 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
RC3H1-204ENST00000479099 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
RC3H1-204ENST00000479099 ARSIQ5FYB1 569 aa10.46□□□□□ -0.73
RC3H1-204ENST00000479099 SPNS2Q8IVW8 549 aa10.46□□□□□ -0.73
RC3H1-204ENST00000479099 VARS2Q5ST30 1063 aaKnown RBP10.45□□□□□ -0.74
RC3H1-204ENST00000479099 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
RC3H1-204ENST00000479099 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
RC3H1-204ENST00000479099 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
RC3H1-204ENST00000479099 SLC34A2O95436 690 aa10.42□□□□□ -0.74
RC3H1-204ENST00000479099 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
RC3H1-204ENST00000479099 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
RC3H1-204ENST00000479099 KHSRPQ92945 711 aaKnown RBP eCLIP10.4□□□□□ -0.74
RC3H1-204ENST00000479099 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
RC3H1-204ENST00000479099 ZNF316A6NFI3 1004 aaPredicted RBP10.38□□□□□ -0.75
RC3H1-204ENST00000479099 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
RC3H1-204ENST00000479099 FOXK1P85037 733 aa10.37□□□□□ -0.75
RC3H1-204ENST00000479099 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
RC3H1-204ENST00000479099 NUDT7P0C024 238 aa10.35□□□□□ -0.75
RC3H1-204ENST00000479099 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
RC3H1-204ENST00000479099 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
RC3H1-204ENST00000479099 GTPBP6O43824 516 aaPredicted RBP10.31□□□□□ -0.76
RC3H1-204ENST00000479099 DSG2Q14126 1118 aa10.31□□□□□ -0.76
RC3H1-204ENST00000479099 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
RC3H1-204ENST00000479099 BBXQ8WY36 941 aaPredicted RBP10.31□□□□□ -0.76
RC3H1-204ENST00000479099 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
RC3H1-204ENST00000479099 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
RC3H1-204ENST00000479099 NBR1Q14596 966 aa10.26□□□□□ -0.77
RC3H1-204ENST00000479099 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
RC3H1-204ENST00000479099 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
RC3H1-204ENST00000479099 PSDA5PKW4 1024 aaPredicted RBP10.25□□□□□ -0.77
RC3H1-204ENST00000479099 TBC1D12O60347 775 aa10.25□□□□□ -0.77
RC3H1-204ENST00000479099 PDE4AP27815 886 aa10.24□□□□□ -0.77
RC3H1-204ENST00000479099 PBX2P40425 430 aa10.24□□□□□ -0.77
RC3H1-204ENST00000479099 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
RC3H1-204ENST00000479099 PPP1R15BQ5SWA1 713 aa10.22□□□□□ -0.77
RC3H1-204ENST00000479099 PTGER2P43116 358 aa10.21□□□□□ -0.77
RC3H1-204ENST00000479099 LSM11P83369 360 aaKnown RBP eCLIP10.21□□□□□ -0.77
RC3H1-204ENST00000479099 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
RC3H1-204ENST00000479099 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
RC3H1-204ENST00000479099 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
RC3H1-204ENST00000479099 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
RC3H1-204ENST00000479099 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
RC3H1-204ENST00000479099 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
RC3H1-204ENST00000479099 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
RC3H1-204ENST00000479099 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
RC3H1-204ENST00000479099 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
RC3H1-204ENST00000479099 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
RC3H1-204ENST00000479099 AXIN2Q9Y2T1 843 aa10.16□□□□□ -0.78
RC3H1-204ENST00000479099 TTBK1Q5TCY1 1321 aaPredicted RBP10.15□□□□□ -0.78
RC3H1-204ENST00000479099 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
RC3H1-204ENST00000479099 MFSD10Q14728 455 aa10.15□□□□□ -0.78
RC3H1-204ENST00000479099 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
RC3H1-204ENST00000479099 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
RC3H1-204ENST00000479099 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
RC3H1-204ENST00000479099 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
RC3H1-204ENST00000479099 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
RC3H1-204ENST00000479099 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
RC3H1-204ENST00000479099 TK2O00142 265 aa10.07□□□□□ -0.8
RC3H1-204ENST00000479099 PSEN2P49810 448 aa10.07□□□□□ -0.8
RC3H1-204ENST00000479099 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
RC3H1-204ENST00000479099 ANO8Q9HCE9 1232 aaPredicted RBP10.07□□□□□ -0.8
RC3H1-204ENST00000479099 EVI5O60447 810 aa10.06□□□□□ -0.8
RC3H1-204ENST00000479099 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
RC3H1-204ENST00000479099 KCNH8Q96L42 1107 aa10.06□□□□□ -0.8
RC3H1-204ENST00000479099 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
RC3H1-204ENST00000479099 MYT1Q01538 1121 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms