RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
SMARCAL1-211ENST00000479008 PPRC1Q5VV67 1664 aaKnown RBP20.95■□□□□ 0.94
SMARCAL1-211ENST00000479008 FGD6Q6ZV73 1430 aa20.95■□□□□ 0.94
SMARCAL1-211ENST00000479008 PTPN23Q9H3S7 1636 aa20.94■□□□□ 0.94
SMARCAL1-211ENST00000479008 CFDP1Q9UEE9 299 aaPredicted RBP20.94■□□□□ 0.94
SMARCAL1-211ENST00000479008 MIA2Q96PC5 1412 aa20.94■□□□□ 0.94
SMARCAL1-211ENST00000479008 CFAP74Q9C0B2 1584 aa20.91■□□□□ 0.94
SMARCAL1-211ENST00000479008 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
SMARCAL1-211ENST00000479008 RRBP1Q9P2E9 1410 aaKnown RBP20.9■□□□□ 0.94
SMARCAL1-211ENST00000479008 ZNF777Q9ULD5 760 aaPredicted RBP20.9■□□□□ 0.94
SMARCAL1-211ENST00000479008 FANCAO15360 1455 aa20.89■□□□□ 0.94
SMARCAL1-211ENST00000479008 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
SMARCAL1-211ENST00000479008 EFCAB2Q5VUJ9 269 aa20.88■□□□□ 0.93
SMARCAL1-211ENST00000479008 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
SMARCAL1-211ENST00000479008 TEX14Q8IWB6 1497 aa20.86■□□□□ 0.93
SMARCAL1-211ENST00000479008 ZNF644Q9H582 1327 aaPredicted RBP20.85■□□□□ 0.93
SMARCAL1-211ENST00000479008 NEO1Q92859 1461 aa20.84■□□□□ 0.93
SMARCAL1-211ENST00000479008 FAM50AQ14320 339 aaKnown RBP20.84■□□□□ 0.93
SMARCAL1-211ENST00000479008 ABCC1P33527 1531 aa20.83■□□□□ 0.93
SMARCAL1-211ENST00000479008 AKNAQ7Z591 1439 aa20.83■□□□□ 0.93
SMARCAL1-211ENST00000479008 SYCP2Q9BX26 1530 aa20.82■□□□□ 0.92
SMARCAL1-211ENST00000479008 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
SMARCAL1-211ENST00000479008 ADGRL1O94910 1474 aa20.81■□□□□ 0.92
SMARCAL1-211ENST00000479008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.79■□□□□ 0.92
SMARCAL1-211ENST00000479008 DNMT1P26358 1616 aaKnown RBP20.78■□□□□ 0.92
SMARCAL1-211ENST00000479008 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
SMARCAL1-211ENST00000479008 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
SMARCAL1-211ENST00000479008 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
SMARCAL1-211ENST00000479008 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
SMARCAL1-211ENST00000479008 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
SMARCAL1-211ENST00000479008 SCAPERQ9BY12 1400 aa20.76■□□□□ 0.91
SMARCAL1-211ENST00000479008 CROCC2H7BZ55 1655 aa20.76■□□□□ 0.91
SMARCAL1-211ENST00000479008 MBD5Q9P267 1494 aa20.75■□□□□ 0.91
SMARCAL1-211ENST00000479008 CCDC141Q6ZP82 1450 aa20.73■□□□□ 0.91
SMARCAL1-211ENST00000479008 DAPK1P53355 1430 aa20.72■□□□□ 0.91
SMARCAL1-211ENST00000479008 TRAPPC8Q9Y2L5 1435 aa20.72■□□□□ 0.91
SMARCAL1-211ENST00000479008 ITGAEP38570 1179 aa20.72■□□□□ 0.91
SMARCAL1-211ENST00000479008 RICTORQ6R327 1708 aa20.72■□□□□ 0.91
SMARCAL1-211ENST00000479008 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
SMARCAL1-211ENST00000479008 ABCC5O15440 1437 aa20.7■□□□□ 0.9
SMARCAL1-211ENST00000479008 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
SMARCAL1-211ENST00000479008 RSPH4AQ5TD94 716 aa20.68■□□□□ 0.9
SMARCAL1-211ENST00000479008 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
SMARCAL1-211ENST00000479008 FRMPD1Q5SYB0 1578 aa20.68■□□□□ 0.9
SMARCAL1-211ENST00000479008 ADGBQ8N7X0 1667 aa20.67■□□□□ 0.9
SMARCAL1-211ENST00000479008 PTPRKQ15262 1439 aa20.66■□□□□ 0.9
SMARCAL1-211ENST00000479008 SHANK2Q9UPX8 1470 aa20.66■□□□□ 0.9
SMARCAL1-211ENST00000479008 KDM5CP41229 1560 aa20.66■□□□□ 0.9
SMARCAL1-211ENST00000479008 KDM6BO15054 1643 aa20.66■□□□□ 0.9
SMARCAL1-211ENST00000479008 MAST1Q9Y2H9 1570 aa20.65■□□□□ 0.9
SMARCAL1-211ENST00000479008 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
SMARCAL1-211ENST00000479008 AFAP1Q8N556 730 aa20.65■□□□□ 0.9
SMARCAL1-211ENST00000479008 RAPGEF3O95398 923 aa20.64■□□□□ 0.89
SMARCAL1-211ENST00000479008 C9orf84Q5VXU9 1444 aa20.63■□□□□ 0.89
SMARCAL1-211ENST00000479008 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
SMARCAL1-211ENST00000479008 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
SMARCAL1-211ENST00000479008 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
SMARCAL1-211ENST00000479008 CHIC2Q9UKJ5 165 aa20.62■□□□□ 0.89
SMARCAL1-211ENST00000479008 HECW2Q9P2P5 1572 aa20.62■□□□□ 0.89
SMARCAL1-211ENST00000479008 SPAG9O60271 1321 aaKnown RBP20.61■□□□□ 0.89
SMARCAL1-211ENST00000479008 ZFYVE16Q7Z3T8 1539 aa20.61■□□□□ 0.89
SMARCAL1-211ENST00000479008 KIDINS220Q9ULH0 1771 aa20.61■□□□□ 0.89
SMARCAL1-211ENST00000479008 ATP7AQ04656 1500 aa20.6■□□□□ 0.89
SMARCAL1-211ENST00000479008 ZMYM4Q5VZL5 1548 aa20.6■□□□□ 0.89
SMARCAL1-211ENST00000479008 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
SMARCAL1-211ENST00000479008 ADGRL2O95490 1459 aa20.58■□□□□ 0.89
SMARCAL1-211ENST00000479008 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
SMARCAL1-211ENST00000479008 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
SMARCAL1-211ENST00000479008 RTEL1-TNFRSF6BF6WH68 1400 aa20.57■□□□□ 0.88
SMARCAL1-211ENST00000479008 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
SMARCAL1-211ENST00000479008 ABCA6Q8N139 1617 aa20.55■□□□□ 0.88
SMARCAL1-211ENST00000479008 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
SMARCAL1-211ENST00000479008 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
SMARCAL1-211ENST00000479008 GCC2Q8IWJ2 1684 aa20.54■□□□□ 0.88
SMARCAL1-211ENST00000479008 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
SMARCAL1-211ENST00000479008 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
SMARCAL1-211ENST00000479008 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
SMARCAL1-211ENST00000479008 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
SMARCAL1-211ENST00000479008 YEATS2Q9ULM3 1422 aa20.51■□□□□ 0.87
SMARCAL1-211ENST00000479008 KIF15Q9NS87 1388 aa20.5■□□□□ 0.87
SMARCAL1-211ENST00000479008 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
SMARCAL1-211ENST00000479008 HFM1A2PYH4 1435 aa20.49■□□□□ 0.87
SMARCAL1-211ENST00000479008 NAIPQ13075 1403 aa20.48■□□□□ 0.87
SMARCAL1-211ENST00000479008 DUOX2Q9NRD8 1548 aa20.47■□□□□ 0.87
SMARCAL1-211ENST00000479008 SETD5Q9C0A6 1442 aa20.44■□□□□ 0.86
SMARCAL1-211ENST00000479008 A2MP01023 1474 aa20.43■□□□□ 0.86
SMARCAL1-211ENST00000479008 ANKRD50Q9ULJ7 1429 aa20.43■□□□□ 0.86
SMARCAL1-211ENST00000479008 ATP10AO60312 1499 aa20.43■□□□□ 0.86
SMARCAL1-211ENST00000479008 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
SMARCAL1-211ENST00000479008 DHX29Q7Z478 1369 aaKnown RBP20.4■□□□□ 0.86
SMARCAL1-211ENST00000479008 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
SMARCAL1-211ENST00000479008 EIF2AK4Q9P2K8 1649 aaKnown RBP20.4■□□□□ 0.86
SMARCAL1-211ENST00000479008 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.85
SMARCAL1-211ENST00000479008 SIGLEC1Q9BZZ2 1709 aa20.39■□□□□ 0.85
SMARCAL1-211ENST00000479008 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
SMARCAL1-211ENST00000479008 AGLP35573 1532 aa20.32■□□□□ 0.84
SMARCAL1-211ENST00000479008 DEPDC5O75140 1603 aa20.32■□□□□ 0.84
SMARCAL1-211ENST00000479008 KIF3BO15066 747 aa20.32■□□□□ 0.84
SMARCAL1-211ENST00000479008 UNC13BO14795 1591 aa20.32■□□□□ 0.84
SMARCAL1-211ENST00000479008 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms