RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 EFCAB2Q5VUJ9 269 aa17.74■□□□□ 0.43
SRRT-211ENST00000478693 AKNAQ7Z591 1439 aa17.73■□□□□ 0.43
SRRT-211ENST00000478693 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
SRRT-211ENST00000478693 ITSN2Q9NZM3 1697 aa17.73■□□□□ 0.43
SRRT-211ENST00000478693 CDC42BPAQ5VT25 1732 aa17.72■□□□□ 0.43
SRRT-211ENST00000478693 ADGRL1O94910 1474 aa17.71■□□□□ 0.43
SRRT-211ENST00000478693 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
SRRT-211ENST00000478693 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
SRRT-211ENST00000478693 ZNF777Q9ULD5 760 aaPredicted RBP17.7■□□□□ 0.42
SRRT-211ENST00000478693 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
SRRT-211ENST00000478693 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
SRRT-211ENST00000478693 COL17A1Q9UMD9 1497 aaPredicted RBP17.68■□□□□ 0.42
SRRT-211ENST00000478693 SCAPERQ9BY12 1400 aa17.66■□□□□ 0.42
SRRT-211ENST00000478693 ABCC1P33527 1531 aa17.64■□□□□ 0.41
SRRT-211ENST00000478693 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
SRRT-211ENST00000478693 SAMD9LQ8IVG5 1584 aa17.64■□□□□ 0.41
SRRT-211ENST00000478693 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
SRRT-211ENST00000478693 MYOM3Q5VTT5 1437 aa17.63■□□□□ 0.41
SRRT-211ENST00000478693 POGZQ7Z3K3 1410 aa17.63■□□□□ 0.41
SRRT-211ENST00000478693 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
SRRT-211ENST00000478693 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
SRRT-211ENST00000478693 FRMPD1Q5SYB0 1578 aa17.61■□□□□ 0.41
SRRT-211ENST00000478693 MYT1LQ9UL68 1186 aa17.6■□□□□ 0.41
SRRT-211ENST00000478693 CAMSAP2Q08AD1 1489 aa17.6■□□□□ 0.41
SRRT-211ENST00000478693 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
SRRT-211ENST00000478693 RICTORQ6R327 1708 aa17.58■□□□□ 0.41
SRRT-211ENST00000478693 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
SRRT-211ENST00000478693 ARHGEF12Q9NZN5 1544 aa17.57■□□□□ 0.4
SRRT-211ENST00000478693 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
SRRT-211ENST00000478693 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRRT-211ENST00000478693 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
SRRT-211ENST00000478693 TRAPPC8Q9Y2L5 1435 aa17.55■□□□□ 0.4
SRRT-211ENST00000478693 ZMYM4Q5VZL5 1548 aa17.55■□□□□ 0.4
SRRT-211ENST00000478693 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
SRRT-211ENST00000478693 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
SRRT-211ENST00000478693 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
SRRT-211ENST00000478693 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
SRRT-211ENST00000478693 KDM5CP41229 1560 aa17.53■□□□□ 0.4
SRRT-211ENST00000478693 HECW2Q9P2P5 1572 aa17.53■□□□□ 0.4
SRRT-211ENST00000478693 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.4
SRRT-211ENST00000478693 CCDC141Q6ZP82 1450 aa17.51■□□□□ 0.39
SRRT-211ENST00000478693 MAGI2Q86UL8 1455 aa17.51■□□□□ 0.39
SRRT-211ENST00000478693 SPAG9O60271 1321 aaKnown RBP17.49■□□□□ 0.39
SRRT-211ENST00000478693 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
SRRT-211ENST00000478693 MBD5Q9P267 1494 aa17.49■□□□□ 0.39
SRRT-211ENST00000478693 YEATS2Q9ULM3 1422 aa17.48■□□□□ 0.39
SRRT-211ENST00000478693 TCOF1Q13428 1488 aaKnown RBP17.47■□□□□ 0.39
SRRT-211ENST00000478693 ARHGEF5Q12774 1597 aa17.47■□□□□ 0.39
SRRT-211ENST00000478693 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
SRRT-211ENST00000478693 RSPH4AQ5TD94 716 aa17.46■□□□□ 0.39
SRRT-211ENST00000478693 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
SRRT-211ENST00000478693 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
SRRT-211ENST00000478693 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
SRRT-211ENST00000478693 INO80Q9ULG1 1556 aaPredicted RBP17.44■□□□□ 0.38
SRRT-211ENST00000478693 ARID4BQ4LE39 1312 aaPredicted RBP17.44■□□□□ 0.38
SRRT-211ENST00000478693 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
SRRT-211ENST00000478693 C9orf84Q5VXU9 1444 aa17.43■□□□□ 0.38
SRRT-211ENST00000478693 DIP2CQ9Y2E4 1556 aa17.43■□□□□ 0.38
SRRT-211ENST00000478693 ATP10AO60312 1499 aa17.42■□□□□ 0.38
SRRT-211ENST00000478693 KIDINS220Q9ULH0 1771 aa17.41■□□□□ 0.38
SRRT-211ENST00000478693 DAPK1P53355 1430 aa17.41■□□□□ 0.38
SRRT-211ENST00000478693 DNMT1P26358 1616 aaKnown RBP17.41■□□□□ 0.38
SRRT-211ENST00000478693 RTEL1-TNFRSF6BF6WH68 1400 aa17.39■□□□□ 0.38
SRRT-211ENST00000478693 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.37
SRRT-211ENST00000478693 SHANK2Q9UPX8 1470 aa17.38■□□□□ 0.37
SRRT-211ENST00000478693 ABCC5O15440 1437 aa17.38■□□□□ 0.37
SRRT-211ENST00000478693 MAST1Q9Y2H9 1570 aa17.37■□□□□ 0.37
SRRT-211ENST00000478693 ITGAEP38570 1179 aa17.36■□□□□ 0.37
SRRT-211ENST00000478693 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
SRRT-211ENST00000478693 A2MP01023 1474 aa17.35■□□□□ 0.37
SRRT-211ENST00000478693 REREQ9P2R6 1566 aa17.35■□□□□ 0.37
SRRT-211ENST00000478693 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
SRRT-211ENST00000478693 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
SRRT-211ENST00000478693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
SRRT-211ENST00000478693 MLECQ14165 292 aa17.33■□□□□ 0.36
SRRT-211ENST00000478693 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
SRRT-211ENST00000478693 ANKRD30AQ9BXX3 1397 aa17.31■□□□□ 0.36
SRRT-211ENST00000478693 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
SRRT-211ENST00000478693 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
SRRT-211ENST00000478693 KIF15Q9NS87 1388 aa17.29■□□□□ 0.36
SRRT-211ENST00000478693 AGLP35573 1532 aa17.29■□□□□ 0.36
SRRT-211ENST00000478693 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
SRRT-211ENST00000478693 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
SRRT-211ENST00000478693 DUOX2Q9NRD8 1548 aa17.27■□□□□ 0.36
SRRT-211ENST00000478693 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
SRRT-211ENST00000478693 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
SRRT-211ENST00000478693 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
SRRT-211ENST00000478693 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
SRRT-211ENST00000478693 KIF3BO15066 747 aa17.24■□□□□ 0.35
SRRT-211ENST00000478693 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
SRRT-211ENST00000478693 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
SRRT-211ENST00000478693 GGT6Q6P531 493 aa17.23■□□□□ 0.35
SRRT-211ENST00000478693 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
SRRT-211ENST00000478693 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
SRRT-211ENST00000478693 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
SRRT-211ENST00000478693 FER1L4A9Z1Z3 1794 aa17.21■□□□□ 0.35
SRRT-211ENST00000478693 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
SRRT-211ENST00000478693 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
SRRT-211ENST00000478693 RIMS1Q86UR5 1692 aaKnown RBP17.2■□□□□ 0.34
SRRT-211ENST00000478693 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms