RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 C2orf72A6NCS6 295 aa11.4□□□□□ -0.58
AFF4-208ENST00000478588 KIF3CO14782 793 aa11.39□□□□□ -0.59
AFF4-208ENST00000478588 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
AFF4-208ENST00000478588 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
AFF4-208ENST00000478588 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
AFF4-208ENST00000478588 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
AFF4-208ENST00000478588 ST18O60284 1047 aa11.33□□□□□ -0.6
AFF4-208ENST00000478588 NCKAP5LQ9HCH0 1330 aa11.32□□□□□ -0.6
AFF4-208ENST00000478588 SNPHO15079 494 aa11.31□□□□□ -0.6
AFF4-208ENST00000478588 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
AFF4-208ENST00000478588 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
AFF4-208ENST00000478588 DSG2Q14126 1118 aa11.28□□□□□ -0.6
AFF4-208ENST00000478588 PDE4AP27815 886 aa11.25□□□□□ -0.61
AFF4-208ENST00000478588 FOXK1P85037 733 aa11.25□□□□□ -0.61
AFF4-208ENST00000478588 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
AFF4-208ENST00000478588 PLPP6Q8IY26 295 aa11.25□□□□□ -0.61
AFF4-208ENST00000478588 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
AFF4-208ENST00000478588 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
AFF4-208ENST00000478588 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
AFF4-208ENST00000478588 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
AFF4-208ENST00000478588 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
AFF4-208ENST00000478588 POTEMA6NI47 508 aa11.2□□□□□ -0.62
AFF4-208ENST00000478588 PPP1R15BQ5SWA1 713 aa11.2□□□□□ -0.62
AFF4-208ENST00000478588 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
AFF4-208ENST00000478588 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
AFF4-208ENST00000478588 ARSIQ5FYB1 569 aa11.19□□□□□ -0.62
AFF4-208ENST00000478588 GPR153Q6NV75 609 aa11.19□□□□□ -0.62
AFF4-208ENST00000478588 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
AFF4-208ENST00000478588 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
AFF4-208ENST00000478588 MFSD10Q14728 455 aa11.17□□□□□ -0.62
AFF4-208ENST00000478588 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
AFF4-208ENST00000478588 SLC34A2O95436 690 aa11.15□□□□□ -0.62
AFF4-208ENST00000478588 PCDHGA4Q9Y5G9 962 aa11.15□□□□□ -0.62
AFF4-208ENST00000478588 ZSWIM6Q9HCJ5 1215 aa11.14□□□□□ -0.63
AFF4-208ENST00000478588 POTEB3A0JP26 581 aa11.12□□□□□ -0.63
AFF4-208ENST00000478588 EMP3P54852 163 aa11.12□□□□□ -0.63
AFF4-208ENST00000478588 POTEBQ6S5H4 581 aa11.12□□□□□ -0.63
AFF4-208ENST00000478588 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.63
AFF4-208ENST00000478588 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
AFF4-208ENST00000478588 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
AFF4-208ENST00000478588 NUDT7P0C024 238 aa11.1□□□□□ -0.63
AFF4-208ENST00000478588 OXER1Q8TDS5 423 aa11.08□□□□□ -0.64
AFF4-208ENST00000478588 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
AFF4-208ENST00000478588 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
AFF4-208ENST00000478588 ERBB3P21860 1342 aa11.06□□□□□ -0.64
AFF4-208ENST00000478588 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
AFF4-208ENST00000478588 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
AFF4-208ENST00000478588 CAMK2BQ13554 666 aa11.03□□□□□ -0.64
AFF4-208ENST00000478588 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
AFF4-208ENST00000478588 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
AFF4-208ENST00000478588 TBC1D12O60347 775 aa11.02□□□□□ -0.65
AFF4-208ENST00000478588 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
AFF4-208ENST00000478588 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.65
AFF4-208ENST00000478588 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
AFF4-208ENST00000478588 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
AFF4-208ENST00000478588 E2F4Q16254 413 aa10.99□□□□□ -0.65
AFF4-208ENST00000478588 DPYSL4O14531 572 aa10.98□□□□□ -0.65
AFF4-208ENST00000478588 EVI5O60447 810 aa10.96□□□□□ -0.65
AFF4-208ENST00000478588 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
AFF4-208ENST00000478588 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
AFF4-208ENST00000478588 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
AFF4-208ENST00000478588 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
AFF4-208ENST00000478588 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
AFF4-208ENST00000478588 PCDH10Q9P2E7 1040 aa10.9□□□□□ -0.66
AFF4-208ENST00000478588 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
AFF4-208ENST00000478588 KCNV2Q8TDN2 545 aa10.88□□□□□ -0.67
AFF4-208ENST00000478588 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
AFF4-208ENST00000478588 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
AFF4-208ENST00000478588 ARIH1Q9Y4X5 557 aaPredicted RBP10.85□□□□□ -0.67
AFF4-208ENST00000478588 FOSBP53539 338 aa10.84□□□□□ -0.67
AFF4-208ENST00000478588 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
AFF4-208ENST00000478588 PDIA6Q15084 440 aa10.83□□□□□ -0.68
AFF4-208ENST00000478588 PPP4R3BQ5MIZ7 849 aa10.83□□□□□ -0.68
AFF4-208ENST00000478588 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
AFF4-208ENST00000478588 DDX12PQ92771 950 aa10.82□□□□□ -0.68
AFF4-208ENST00000478588 PCDHGA10Q9Y5H3 936 aa10.82□□□□□ -0.68
AFF4-208ENST00000478588 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
AFF4-208ENST00000478588 PSEN2P49810 448 aa10.8□□□□□ -0.68
AFF4-208ENST00000478588 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
AFF4-208ENST00000478588 SPDYE16A6NNV3 312 aaPredicted RBP10.79□□□□□ -0.68
AFF4-208ENST00000478588 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
AFF4-208ENST00000478588 PTGER2P43116 358 aa10.78□□□□□ -0.68
AFF4-208ENST00000478588 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
AFF4-208ENST00000478588 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
AFF4-208ENST00000478588 PHF14O94880 888 aa10.77□□□□□ -0.69
AFF4-208ENST00000478588 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
AFF4-208ENST00000478588 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
AFF4-208ENST00000478588 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
AFF4-208ENST00000478588 PBX2P40425 430 aa10.75□□□□□ -0.69
AFF4-208ENST00000478588 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
AFF4-208ENST00000478588 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
AFF4-208ENST00000478588 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
AFF4-208ENST00000478588 TYW1BQ6NUM6 668 aa10.74□□□□□ -0.69
AFF4-208ENST00000478588 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
AFF4-208ENST00000478588 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
AFF4-208ENST00000478588 BCL2L12Q9HB09 334 aa10.74□□□□□ -0.69
AFF4-208ENST00000478588 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
AFF4-208ENST00000478588 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
AFF4-208ENST00000478588 PLSCR2Q9NRY7 297 aa10.73□□□□□ -0.69
AFF4-208ENST00000478588 NBR1Q14596 966 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms