RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
CDC42BPA-212ENST00000478573 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
CDC42BPA-212ENST00000478573 PPP1R37O75864 691 aa11.64□□□□□ -0.55
CDC42BPA-212ENST00000478573 HS3ST6Q96QI5 342 aa11.64□□□□□ -0.55
CDC42BPA-212ENST00000478573 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
CDC42BPA-212ENST00000478573 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-212ENST00000478573 POTEB3A0JP26 581 aa11.6□□□□□ -0.55
CDC42BPA-212ENST00000478573 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
CDC42BPA-212ENST00000478573 POTEBQ6S5H4 581 aa11.6□□□□□ -0.55
CDC42BPA-212ENST00000478573 ERBB3P21860 1342 aa11.6□□□□□ -0.55
CDC42BPA-212ENST00000478573 TMC2Q8TDI7 906 aa11.58□□□□□ -0.56
CDC42BPA-212ENST00000478573 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
CDC42BPA-212ENST00000478573 KIF3CO14782 793 aa11.54□□□□□ -0.56
CDC42BPA-212ENST00000478573 ARSIQ5FYB1 569 aa11.54□□□□□ -0.56
CDC42BPA-212ENST00000478573 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-212ENST00000478573 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
CDC42BPA-212ENST00000478573 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-212ENST00000478573 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.575e-7■■■□□ 16.2
CDC42BPA-212ENST00000478573 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
CDC42BPA-212ENST00000478573 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
CDC42BPA-212ENST00000478573 DNAJC5Q9H3Z4 198 aa11.48□□□□□ -0.57
CDC42BPA-212ENST00000478573 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
CDC42BPA-212ENST00000478573 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
CDC42BPA-212ENST00000478573 NUDT7P0C024 238 aa11.43□□□□□ -0.58
CDC42BPA-212ENST00000478573 PCDHGA4Q9Y5G9 962 aa11.42□□□□□ -0.58
CDC42BPA-212ENST00000478573 MMRN1Q13201 1228 aa11.41□□□□□ -0.58
CDC42BPA-212ENST00000478573 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPA-212ENST00000478573 PLPP6Q8IY26 295 aa11.4□□□□□ -0.58
CDC42BPA-212ENST00000478573 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPA-212ENST00000478573 FOXK1P85037 733 aa11.39□□□□□ -0.59
CDC42BPA-212ENST00000478573 SLC34A2O95436 690 aa11.38□□□□□ -0.59
CDC42BPA-212ENST00000478573 DSG2Q14126 1118 aa11.38□□□□□ -0.59
CDC42BPA-212ENST00000478573 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
CDC42BPA-212ENST00000478573 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPA-212ENST00000478573 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
CDC42BPA-212ENST00000478573 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-212ENST00000478573 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42BPA-212ENST00000478573 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
CDC42BPA-212ENST00000478573 TBC1D12O60347 775 aa11.28□□□□□ -0.6
CDC42BPA-212ENST00000478573 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-212ENST00000478573 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
CDC42BPA-212ENST00000478573 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
CDC42BPA-212ENST00000478573 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
CDC42BPA-212ENST00000478573 PDE4AP27815 886 aa11.27□□□□□ -0.61
CDC42BPA-212ENST00000478573 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
CDC42BPA-212ENST00000478573 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
CDC42BPA-212ENST00000478573 AXIN2Q9Y2T1 843 aa11.24□□□□□ -0.61
CDC42BPA-212ENST00000478573 LSM11P83369 360 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDC42BPA-212ENST00000478573 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-212ENST00000478573 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPA-212ENST00000478573 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
CDC42BPA-212ENST00000478573 PBX2P40425 430 aa11.2□□□□□ -0.62
CDC42BPA-212ENST00000478573 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
CDC42BPA-212ENST00000478573 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
CDC42BPA-212ENST00000478573 RNF166Q96A37 237 aaPredicted RBP11.2□□□□□ -0.62
CDC42BPA-212ENST00000478573 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
CDC42BPA-212ENST00000478573 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-212ENST00000478573 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
CDC42BPA-212ENST00000478573 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
CDC42BPA-212ENST00000478573 PTGER2P43116 358 aa11.15□□□□□ -0.62
CDC42BPA-212ENST00000478573 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
CDC42BPA-212ENST00000478573 PSEN2P49810 448 aa11.13□□□□□ -0.63
CDC42BPA-212ENST00000478573 MFSD10Q14728 455 aa11.13□□□□□ -0.63
CDC42BPA-212ENST00000478573 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
CDC42BPA-212ENST00000478573 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-212ENST00000478573 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CDC42BPA-212ENST00000478573 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
CDC42BPA-212ENST00000478573 EVI5O60447 810 aa11.1□□□□□ -0.63
CDC42BPA-212ENST00000478573 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
CDC42BPA-212ENST00000478573 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
CDC42BPA-212ENST00000478573 SPRYD3Q8NCJ5 442 aa11.09□□□□□ -0.63
CDC42BPA-212ENST00000478573 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
CDC42BPA-212ENST00000478573 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
CDC42BPA-212ENST00000478573 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
CDC42BPA-212ENST00000478573 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-212ENST00000478573 FOSBP53539 338 aa11.03□□□□□ -0.64
CDC42BPA-212ENST00000478573 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
CDC42BPA-212ENST00000478573 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
CDC42BPA-212ENST00000478573 BCL2L12Q9HB09 334 aa11.01□□□□□ -0.65
CDC42BPA-212ENST00000478573 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
CDC42BPA-212ENST00000478573 TK2O00142 265 aa11□□□□□ -0.65
CDC42BPA-212ENST00000478573 PTPREP23469 700 aa10.99□□□□□ -0.65
CDC42BPA-212ENST00000478573 ZDHHC16Q969W1 377 aa10.99□□□□□ -0.65
CDC42BPA-212ENST00000478573 DPYSL4O14531 572 aa10.98□□□□□ -0.65
CDC42BPA-212ENST00000478573 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
CDC42BPA-212ENST00000478573 HRO43593 1189 aa10.96□□□□□ -0.65
CDC42BPA-212ENST00000478573 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
CDC42BPA-212ENST00000478573 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
CDC42BPA-212ENST00000478573 KCTD12Q96CX2 325 aaKnown RBP10.93□□□□□ -0.66
CDC42BPA-212ENST00000478573 PCDHGA10Q9Y5H3 936 aa10.93□□□□□ -0.66
CDC42BPA-212ENST00000478573 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
CDC42BPA-212ENST00000478573 PHF14O94880 888 aa10.9□□□□□ -0.66
CDC42BPA-212ENST00000478573 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
CDC42BPA-212ENST00000478573 ZBED2Q9BTP6 218 aa10.89□□□□□ -0.67
CDC42BPA-212ENST00000478573 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
CDC42BPA-212ENST00000478573 DDX12PQ92771 950 aa10.88□□□□□ -0.67
CDC42BPA-212ENST00000478573 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
CDC42BPA-212ENST00000478573 SLC4A5Q9BY07 1137 aa10.87□□□□□ -0.67
CDC42BPA-212ENST00000478573 E2F4Q16254 413 aa10.86□□□□□ -0.67
CDC42BPA-212ENST00000478573 RBM33Q96EV2 1170 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms