RNA–Protein interactions for RNA: ENST00000478436.1

PLOD2-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, humanhuman

TSL 1 (best)

Gene PLOD2, Length 3,835 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD2-207ENST00000478436 PLCH2O75038 1416 aa8.63□□□□□ -1.03
PLOD2-207ENST00000478436 POGZQ7Z3K3 1410 aa8.63□□□□□ -1.03
PLOD2-207ENST00000478436 MAST1Q9Y2H9 1570 aa8.63□□□□□ -1.03
PLOD2-207ENST00000478436 PREX1Q8TCU6 1659 aa8.62□□□□□ -1.03
PLOD2-207ENST00000478436 FAM69CQ0P6D2 419 aa8.62□□□□□ -1.03
PLOD2-207ENST00000478436 C3P01024 1663 aa8.61□□□□□ -1.03
PLOD2-207ENST00000478436 ZFYVE16Q7Z3T8 1539 aa8.61□□□□□ -1.03
PLOD2-207ENST00000478436 TROQ12816 1431 aaPredicted RBP8.61□□□□□ -1.03
PLOD2-207ENST00000478436 FAM135AQ9P2D6 1515 aa8.61□□□□□ -1.03
PLOD2-207ENST00000478436 KDM4FA0A1W2PPD8 638 aa8.6□□□□□ -1.03
PLOD2-207ENST00000478436 EHBP1L1Q8N3D4 1523 aa8.6□□□□□ -1.03
PLOD2-207ENST00000478436 RIMS1Q86UR5 1692 aaKnown RBP8.6□□□□□ -1.03
PLOD2-207ENST00000478436 ARHGEF5Q12774 1597 aa8.6□□□□□ -1.03
PLOD2-207ENST00000478436 FANCAO15360 1455 aa8.6□□□□□ -1.03
PLOD2-207ENST00000478436 MLH3Q9UHC1 1453 aa8.6□□□□□ -1.03
PLOD2-207ENST00000478436 RNF17Q9BXT8 1623 aaKnown RBP8.59□□□□□ -1.03
PLOD2-207ENST00000478436 STRCQ7RTU9 1775 aa8.59□□□□□ -1.03
PLOD2-207ENST00000478436 DEPDC5O75140 1603 aa8.58□□□□□ -1.04
PLOD2-207ENST00000478436 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
PLOD2-207ENST00000478436 TRHP20396 242 aaPredicted RBP8.58□□□□□ -1.04
PLOD2-207ENST00000478436 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
PLOD2-207ENST00000478436 AKNAQ7Z591 1439 aa8.58□□□□□ -1.04
PLOD2-207ENST00000478436 ZC3H13Q5T200 1668 aaKnown RBP8.56□□□□□ -1.04
PLOD2-207ENST00000478436 MROH1Q8NDA8 1641 aa8.56□□□□□ -1.04
PLOD2-207ENST00000478436 ZNF518AQ6AHZ1 1483 aa8.55□□□□□ -1.04
PLOD2-207ENST00000478436 GPATCH8Q9UKJ3 1502 aaKnown RBP8.54□□□□□ -1.04
PLOD2-207ENST00000478436 DENND4BO75064 1496 aaPredicted RBP8.54□□□□□ -1.04
PLOD2-207ENST00000478436 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
PLOD2-207ENST00000478436 LMTK3Q96Q04 1460 aa8.53□□□□□ -1.04
PLOD2-207ENST00000478436 MBD5Q9P267 1494 aa8.53□□□□□ -1.04
PLOD2-207ENST00000478436 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
PLOD2-207ENST00000478436 KIAA1107Q9UPP5 1409 aa8.53□□□□□ -1.04
PLOD2-207ENST00000478436 NPM1P06748 294 aaKnown RBP eCLIP8.52□□□□□ -1.04
PLOD2-207ENST00000478436 PTPRMP28827 1452 aa8.52□□□□□ -1.05
PLOD2-207ENST00000478436 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
PLOD2-207ENST00000478436 SYCP2Q9BX26 1530 aa8.51□□□□□ -1.05
PLOD2-207ENST00000478436 C9orf84Q5VXU9 1444 aa8.51□□□□□ -1.05
PLOD2-207ENST00000478436 ATP7AQ04656 1500 aa8.51□□□□□ -1.05
PLOD2-207ENST00000478436 YEATS2Q9ULM3 1422 aa8.5□□□□□ -1.05
PLOD2-207ENST00000478436 VWDEQ8N2E2 1590 aa8.5□□□□□ -1.05
PLOD2-207ENST00000478436 KDM5DQ9BY66 1539 aa8.49□□□□□ -1.05
PLOD2-207ENST00000478436 ATP10AO60312 1499 aa8.49□□□□□ -1.05
PLOD2-207ENST00000478436 POLR1AO95602 1720 aaPredicted RBP8.49□□□□□ -1.05
PLOD2-207ENST00000478436 CLTCQ00610 1675 aaKnown RBP8.49□□□□□ -1.05
PLOD2-207ENST00000478436 CLIP1P30622 1438 aa8.49□□□□□ -1.05
PLOD2-207ENST00000478436 ARHGAP5Q13017 1502 aa8.48□□□□□ -1.05
PLOD2-207ENST00000478436 CAMSAP2Q08AD1 1489 aa8.48□□□□□ -1.05
PLOD2-207ENST00000478436 TCOF1Q13428 1488 aaKnown RBP8.48□□□□□ -1.05
PLOD2-207ENST00000478436 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
PLOD2-207ENST00000478436 RTEL1-TNFRSF6BF6WH68 1400 aa8.46□□□□□ -1.05
PLOD2-207ENST00000478436 PLEKHH2Q8IVE3 1493 aa8.46□□□□□ -1.05
PLOD2-207ENST00000478436 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.06
PLOD2-207ENST00000478436 TRAPPC8Q9Y2L5 1435 aa8.46□□□□□ -1.06
PLOD2-207ENST00000478436 LRRC9Q6ZRR7 1453 aa8.45□□□□□ -1.06
PLOD2-207ENST00000478436 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
PLOD2-207ENST00000478436 VPS8Q8N3P4 1428 aa8.45□□□□□ -1.06
PLOD2-207ENST00000478436 CAMSAP1Q5T5Y3 1602 aa8.43□□□□□ -1.06
PLOD2-207ENST00000478436 SCAPERQ9BY12 1400 aa8.42□□□□□ -1.06
PLOD2-207ENST00000478436 NCOA2Q15596 1464 aa8.42□□□□□ -1.06
PLOD2-207ENST00000478436 UNC13BO14795 1591 aa8.42□□□□□ -1.06
PLOD2-207ENST00000478436 NEURL4Q96JN8 1562 aa8.42□□□□□ -1.06
PLOD2-207ENST00000478436 CEP152O94986 1710 aa8.42□□□□□ -1.06
PLOD2-207ENST00000478436 PTPN23Q9H3S7 1636 aa8.41□□□□□ -1.06
PLOD2-207ENST00000478436 SPATA31D1Q6ZQQ2 1576 aa8.41□□□□□ -1.06
PLOD2-207ENST00000478436 PIK3C2BO00750 1634 aa8.41□□□□□ -1.06
PLOD2-207ENST00000478436 LMTK2Q8IWU2 1503 aa8.41□□□□□ -1.06
PLOD2-207ENST00000478436 NPATQ14207 1427 aa8.4□□□□□ -1.06
PLOD2-207ENST00000478436 UBR1Q8IWV7 1749 aa8.4□□□□□ -1.06
PLOD2-207ENST00000478436 GCC2Q8IWJ2 1684 aa8.4□□□□□ -1.06
PLOD2-207ENST00000478436 XIRP1Q702N8 1843 aaKnown RBP8.39□□□□□ -1.07
PLOD2-207ENST00000478436 ADGRL2O95490 1459 aa8.39□□□□□ -1.07
PLOD2-207ENST00000478436 LTBP4Q8N2S1 1624 aa8.39□□□□□ -1.07
PLOD2-207ENST00000478436 MIA2Q96PC5 1412 aa8.39□□□□□ -1.07
PLOD2-207ENST00000478436 SETD1BQ9UPS6 1966 aaKnown RBP8.39□□□□□ -1.07
PLOD2-207ENST00000478436 CCDC141Q6ZP82 1450 aa8.38□□□□□ -1.07
PLOD2-207ENST00000478436 STRCP1A6NGW2 1772 aa8.38□□□□□ -1.07
PLOD2-207ENST00000478436 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
PLOD2-207ENST00000478436 CEP170BQ9Y4F5 1589 aaPredicted RBP8.37□□□□□ -1.07
PLOD2-207ENST00000478436 IQSEC2Q5JU85 1478 aa8.36□□□□□ -1.07
PLOD2-207ENST00000478436 PLEKHD1A6NEE1 506 aa8.36□□□□□ -1.07
PLOD2-207ENST00000478436 PLA2R1Q13018 1463 aa8.36□□□□□ -1.07
PLOD2-207ENST00000478436 CNTLNQ9NXG0 1405 aa8.35□□□□□ -1.07
PLOD2-207ENST00000478436 ALKQ9UM73 1620 aa8.35□□□□□ -1.07
PLOD2-207ENST00000478436 A2MP01023 1474 aa8.35□□□□□ -1.07
PLOD2-207ENST00000478436 ABCC3O15438 1527 aa8.35□□□□□ -1.07
PLOD2-207ENST00000478436 RAPGEF3O95398 923 aa8.35□□□□□ -1.07
PLOD2-207ENST00000478436 IQGAP3Q86VI3 1631 aa8.34□□□□□ -1.07
PLOD2-207ENST00000478436 UGGT1Q9NYU2 1555 aa8.34□□□□□ -1.07
PLOD2-207ENST00000478436 SLC24A1O60721 1099 aa8.34□□□□□ -1.07
PLOD2-207ENST00000478436 PTPRKQ15262 1439 aa8.34□□□□□ -1.07
PLOD2-207ENST00000478436 DUOX2Q9NRD8 1548 aa8.34□□□□□ -1.08
PLOD2-207ENST00000478436 PZPP20742 1482 aa8.33□□□□□ -1.08
PLOD2-207ENST00000478436 MYOM3Q5VTT5 1437 aa8.33□□□□□ -1.08
PLOD2-207ENST00000478436 TET3O43151 1660 aa8.32□□□□□ -1.08
PLOD2-207ENST00000478436 SYNMO15061 1565 aa8.32□□□□□ -1.08
PLOD2-207ENST00000478436 MED14O60244 1454 aa8.31□□□□□ -1.08
PLOD2-207ENST00000478436 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
PLOD2-207ENST00000478436 NCOA1Q15788 1441 aa8.31□□□□□ -1.08
PLOD2-207ENST00000478436 SETD1AO15047 1707 aaKnown RBP8.31□□□□□ -1.08
PLOD2-207ENST00000478436 MYO5BQ9ULV0 1848 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms