RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
SMARCA1-204ENST00000478420 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
SMARCA1-204ENST00000478420 PDE4AP27815 886 aa9.61□□□□□ -0.87
SMARCA1-204ENST00000478420 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
SMARCA1-204ENST00000478420 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
SMARCA1-204ENST00000478420 POTEB2H3BUK9 544 aa9.58□□□□□ -0.88
SMARCA1-204ENST00000478420 LARP6Q9BRS8 491 aaKnown RBP9.58□□□□□ -0.88
SMARCA1-204ENST00000478420 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
SMARCA1-204ENST00000478420 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
SMARCA1-204ENST00000478420 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
SMARCA1-204ENST00000478420 DDX27Q96GQ7 796 aaKnown RBP9.54□□□□□ -0.88
SMARCA1-204ENST00000478420 MFSD10Q14728 455 aa9.53□□□□□ -0.88
SMARCA1-204ENST00000478420 P3H3Q8IVL6 736 aa9.52□□□□□ -0.89
SMARCA1-204ENST00000478420 C2orf72A6NCS6 295 aa9.51□□□□□ -0.89
SMARCA1-204ENST00000478420 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
SMARCA1-204ENST00000478420 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 E2F4Q16254 413 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 PPP1R15BQ5SWA1 713 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 PCDH10Q9P2E7 1040 aa9.5□□□□□ -0.89
SMARCA1-204ENST00000478420 KIF3CO14782 793 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 FOXK1P85037 733 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 DSG2Q14126 1118 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
SMARCA1-204ENST00000478420 KCNV2Q8TDN2 545 aa9.47□□□□□ -0.89
SMARCA1-204ENST00000478420 BCANQ96GW7 911 aa9.47□□□□□ -0.89
SMARCA1-204ENST00000478420 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
SMARCA1-204ENST00000478420 PLPP6Q8IY26 295 aa9.45□□□□□ -0.9
SMARCA1-204ENST00000478420 SCUBE2Q9NQ36 999 aa9.45□□□□□ -0.9
SMARCA1-204ENST00000478420 NBR1Q14596 966 aa9.44□□□□□ -0.9
SMARCA1-204ENST00000478420 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
SMARCA1-204ENST00000478420 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-204ENST00000478420 SLAIN1Q8ND83 568 aa9.39□□□□□ -0.91
SMARCA1-204ENST00000478420 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-204ENST00000478420 EMILIN3Q9NT22 766 aa9.36□□□□□ -0.91
SMARCA1-204ENST00000478420 DPYSL4O14531 572 aa9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
SMARCA1-204ENST00000478420 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
SMARCA1-204ENST00000478420 SLC34A2O95436 690 aa9.31□□□□□ -0.92
SMARCA1-204ENST00000478420 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
SMARCA1-204ENST00000478420 TBC1D12O60347 775 aa9.3□□□□□ -0.92
SMARCA1-204ENST00000478420 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-204ENST00000478420 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-204ENST00000478420 DOK7Q18PE1 504 aa9.28□□□□□ -0.92
SMARCA1-204ENST00000478420 RIMBP2O15034 1052 aa9.27□□□□□ -0.93
SMARCA1-204ENST00000478420 SEMA3EO15041 775 aa9.27□□□□□ -0.93
SMARCA1-204ENST00000478420 PDIA6Q15084 440 aa9.27□□□□□ -0.93
SMARCA1-204ENST00000478420 SNPHO15079 494 aa9.26□□□□□ -0.93
SMARCA1-204ENST00000478420 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
SMARCA1-204ENST00000478420 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
SMARCA1-204ENST00000478420 ZNF710Q8N1W2 664 aa9.24□□□□□ -0.93
SMARCA1-204ENST00000478420 EVI5O60447 810 aa9.23□□□□□ -0.93
SMARCA1-204ENST00000478420 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
SMARCA1-204ENST00000478420 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
SMARCA1-204ENST00000478420 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
SMARCA1-204ENST00000478420 MLLT3P42568 568 aaPredicted RBP9.18□□□□□ -0.94
SMARCA1-204ENST00000478420 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
SMARCA1-204ENST00000478420 GRXCR2A6NFK2 248 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 PTGER2P43116 358 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
SMARCA1-204ENST00000478420 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
SMARCA1-204ENST00000478420 NUDT7P0C024 238 aa9.15□□□□□ -0.94
SMARCA1-204ENST00000478420 DDX12PQ92771 950 aa9.15□□□□□ -0.94
SMARCA1-204ENST00000478420 KHSRPQ92945 711 aaKnown RBP eCLIP9.15□□□□□ -0.942e-7■■□□□ 12.7
SMARCA1-204ENST00000478420 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
SMARCA1-204ENST00000478420 HOXB1P14653 301 aaPredicted RBP9.13□□□□□ -0.95
SMARCA1-204ENST00000478420 PHF14O94880 888 aa9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 RBM26Q5T8P6 1007 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 EPAS1Q99814 870 aa9.1□□□□□ -0.95
SMARCA1-204ENST00000478420 OSBPP22059 807 aa9.09□□□□□ -0.95
SMARCA1-204ENST00000478420 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
SMARCA1-204ENST00000478420 LHX6Q9UPM6 363 aa9.08□□□□□ -0.96
SMARCA1-204ENST00000478420 PCDHGA10Q9Y5H3 936 aa9.08□□□□□ -0.96
SMARCA1-204ENST00000478420 PSDA5PKW4 1024 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 ST18O60284 1047 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 FOSBP53539 338 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 ZNF454Q8N9F8 522 aa9.07□□□□□ -0.96
SMARCA1-204ENST00000478420 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
SMARCA1-204ENST00000478420 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
SMARCA1-204ENST00000478420 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
SMARCA1-204ENST00000478420 MAP3K7O43318 606 aa9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 PRKCSHP14314 528 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 EN1Q05925 392 aaPredicted RBP9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 PPP4R3BQ5MIZ7 849 aa9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 ZDHHC16Q969W1 377 aa9.04□□□□□ -0.96
SMARCA1-204ENST00000478420 ZC3H15Q8WU90 426 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-204ENST00000478420 RBM33Q96EV2 1170 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-204ENST00000478420 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-204ENST00000478420 EMP3P54852 163 aa9.01□□□□□ -0.97
SMARCA1-204ENST00000478420 ERBB3P21860 1342 aa9.01□□□□□ -0.97
SMARCA1-204ENST00000478420 MMRN1Q13201 1228 aa9□□□□□ -0.97
SMARCA1-204ENST00000478420 MARVELD3Q96A59 401 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms